EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100011252 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 13905 bases
Position: chrJH172712.1:288700-302604
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100015212	TUDOR	PF00567.24	7.5e-05	1	1
ENSHGLP00100015212	SMN	PF06003.12	2.6e-103	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100015379	-	882	-	ENSHGLP00100015212	294 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100011252's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100011252's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100011252	-	96	88.028	ENSHGLG00100018676	-	100	88.028

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100011252	-	96	80.769	ENSG00000205571	SMN2	87	92.500	Homo_sapiens
ENSHGLG00100011252	-	96	80.769	ENSG00000172062	SMN1	99	79.461	Homo_sapiens
ENSHGLG00100011252	-	92	52.688	ENSAPOG00000011324	smn1	94	51.460	Acanthochromis_polyacanthus
ENSHGLG00100011252	-	96	82.867	ENSAMEG00000003316	-	96	81.818	Ailuropoda_melanoleuca
ENSHGLG00100011252	-	88	47.566	ENSACIG00000019772	-	97	47.148	Amphilophus_citrinellus
ENSHGLG00100011252	-	92	52.688	ENSAOCG00000024444	smn1	94	51.825	Amphiprion_ocellaris
ENSHGLG00100011252	-	92	53.047	ENSAPEG00000016504	smn1	94	51.825	Amphiprion_percula
ENSHGLG00100011252	-	89	52.206	ENSATEG00000002182	smn1	79	52.809	Anabas_testudineus
ENSHGLG00100011252	-	66	54.872	ENSAPLG00000010912	-	97	54.872	Anas_platyrhynchos
ENSHGLG00100011252	-	93	56.631	ENSACAG00000010017	-	95	56.071	Anolis_carolinensis
ENSHGLG00100011252	-	99	76.589	ENSANAG00000032133	-	99	76.589	Aotus_nancymaae
ENSHGLG00100011252	-	92	46.209	ENSACLG00000007308	smn1	88	50.000	Astatotilapia_calliptera
ENSHGLG00100011252	-	96	78.397	ENSBTAG00000005743	SMN2	99	78.082	Bos_taurus
ENSHGLG00100011252	-	96	80.139	ENSCJAG00000016290	-	99	78.859	Callithrix_jacchus
ENSHGLG00100011252	-	96	82.867	ENSCAFG00000007812	SMN	100	81.818	Canis_familiaris
ENSHGLG00100011252	-	96	82.807	ENSCAFG00020019229	-	93	81.757	Canis_lupus_dingo
ENSHGLG00100011252	-	96	78.201	ENSCHIG00000015559	-	99	77.333	Capra_hircus
ENSHGLG00100011252	-	99	80.678	ENSTSYG00000012058	-	99	80.678	Carlito_syrichta
ENSHGLG00100011252	-	76	76.000	ENSCAPG00000011021	-	100	76.991	Cavia_aperea
ENSHGLG00100011252	-	100	85.570	ENSCPOG00000036973	-	100	85.235	Cavia_porcellus
ENSHGLG00100011252	-	98	89.041	ENSCPOG00000012328	-	99	88.475	Cavia_porcellus
ENSHGLG00100011252	-	96	80.000	ENSCCAG00000018127	-	99	78.716	Cebus_capucinus
ENSHGLG00100011252	-	96	80.420	ENSCATG00000037002	-	99	79.125	Cercocebus_atys
ENSHGLG00100011252	-	100	84.797	ENSCLAG00000000284	-	100	84.797	Chinchilla_lanigera
ENSHGLG00100011252	-	96	80.769	ENSCSAG00000015688	-	99	79.461	Chlorocebus_sabaeus
ENSHGLG00100011252	-	86	69.650	ENSCHOG00000007346	-	100	66.667	Choloepus_hoffmanni
ENSHGLG00100011252	-	93	62.230	ENSCPBG00000010968	-	96	62.547	Chrysemys_picta_bellii
ENSHGLG00100011252	-	95	74.126	ENSCANG00000033324	-	95	74.126	Colobus_angolensis_palliatus
ENSHGLG00100011252	-	96	81.338	ENSCANG00000038242	-	100	79.433	Colobus_angolensis_palliatus
ENSHGLG00100011252	-	98	79.655	ENSCGRG00001017959	-	99	79.655	Cricetulus_griseus_chok1gshd
ENSHGLG00100011252	-	98	61.806	ENSCGRG00001016998	-	99	62.153	Cricetulus_griseus_chok1gshd
ENSHGLG00100011252	-	98	79.655	ENSCGRG00000007698	Smn1	99	79.655	Cricetulus_griseus_crigri
ENSHGLG00100011252	-	92	47.782	ENSCSEG00000015227	smn1	97	48.070	Cynoglossus_semilaevis
ENSHGLG00100011252	-	93	48.252	ENSCVAG00000007498	smn1	95	48.944	Cyprinodon_variegatus
ENSHGLG00100011252	-	94	49.474	ENSDARG00000018494	smn1	96	50.360	Danio_rerio
ENSHGLG00100011252	-	77	67.699	ENSDNOG00000045949	-	95	67.699	Dasypus_novemcinctus
ENSHGLG00100011252	-	83	80.408	ENSDNOG00000007283	-	100	80.408	Dasypus_novemcinctus
ENSHGLG00100011252	-	100	72.391	ENSDORG00000007082	Smn1	99	70.707	Dipodomys_ordii
ENSHGLG00100011252	-	72	65.116	ENSETEG00000001406	-	100	62.791	Echinops_telfairi
ENSHGLG00100011252	-	94	37.179	ENSEBUG00000011902	smn1	98	37.124	Eptatretus_burgeri
ENSHGLG00100011252	-	86	74.517	ENSEASG00005018000	-	89	74.517	Equus_asinus_asinus
ENSHGLG00100011252	-	96	79.791	ENSECAG00000015215	-	100	78.930	Equus_caballus
ENSHGLG00100011252	-	86	73.622	ENSEEUG00000015777	-	100	73.622	Erinaceus_europaeus
ENSHGLG00100011252	-	91	54.676	ENSELUG00000018067	smn1	94	52.330	Esox_lucius
ENSHGLG00100011252	-	100	79.530	ENSFCAG00000028292	SMN	100	80.000	Felis_catus
ENSHGLG00100011252	-	90	57.778	ENSFALG00000012320	-	94	55.762	Ficedula_albicollis
ENSHGLG00100011252	-	100	90.203	ENSFDAG00000017683	-	100	90.203	Fukomys_damarensis
ENSHGLG00100011252	-	62	51.630	ENSFHEG00000018508	smn1	97	49.275	Fundulus_heteroclitus
ENSHGLG00100011252	-	95	49.104	ENSGMOG00000017279	smn1	95	45.161	Gadus_morhua
ENSHGLG00100011252	-	92	58.088	ENSGALG00000002430	SMN	95	56.985	Gallus_gallus
ENSHGLG00100011252	-	92	50.355	ENSGAFG00000009501	smn1	94	49.275	Gambusia_affinis
ENSHGLG00100011252	-	92	47.407	ENSGACG00000010584	smn1	91	47.778	Gasterosteus_aculeatus
ENSHGLG00100011252	-	92	39.231	ENSGAGG00000013639	-	54	50.847	Gopherus_agassizii
ENSHGLG00100011252	-	96	60.069	ENSGAGG00000011374	-	96	61.458	Gopherus_agassizii
ENSHGLG00100011252	-	67	77.000	ENSGGOG00000026704	-	99	75.688	Gorilla_gorilla
ENSHGLG00100011252	-	94	67.143	ENSGGOG00000003872	-	100	70.107	Gorilla_gorilla
ENSHGLG00100011252	-	91	47.232	ENSHBUG00000013987	smn1	94	50.730	Haplochromis_burtoni
ENSHGLG00100011252	-	100	100.000	ENSHGLG00000001018	-	100	100.000	Heterocephalus_glaber_female
ENSHGLG00100011252	-	100	88.514	ENSHGLG00000001905	-	100	88.514	Heterocephalus_glaber_female
ENSHGLG00100011252	-	89	47.985	ENSHCOG00000017136	smn1	87	45.283	Hippocampus_comes
ENSHGLG00100011252	-	94	48.421	ENSIPUG00000012580	smn1	86	49.822	Ictalurus_punctatus
ENSHGLG00100011252	-	90	83.521	ENSSTOG00000012288	-	100	81.786	Ictidomys_tridecemlineatus
ENSHGLG00100011252	-	60	60.335	ENSJJAG00000014853	-	100	60.204	Jaculus_jaculus
ENSHGLG00100011252	-	92	50.000	ENSKMAG00000007239	smn1	96	50.752	Kryptolebias_marmoratus
ENSHGLG00100011252	-	92	50.883	ENSLBEG00000022550	smn1	94	50.566	Labrus_bergylta
ENSHGLG00100011252	-	94	36.082	ENSLACG00000009808	-	96	36.333	Latimeria_chalumnae
ENSHGLG00100011252	-	91	53.676	ENSLOCG00000011339	smn1	94	52.747	Lepisosteus_oculatus
ENSHGLG00100011252	-	100	78.333	ENSLAFG00000003425	-	96	78.333	Loxodonta_africana
ENSHGLG00100011252	-	99	74.747	ENSMFAG00000008812	-	99	74.747	Macaca_fascicularis
ENSHGLG00100011252	-	96	81.119	ENSMFAG00000031523	SMN1	99	79.798	Macaca_fascicularis
ENSHGLG00100011252	-	96	81.119	ENSMMUG00000020214	SMN1	99	79.798	Macaca_mulatta
ENSHGLG00100011252	-	99	74.074	ENSMMUG00000030594	-	99	74.074	Macaca_mulatta
ENSHGLG00100011252	-	96	80.769	ENSMNEG00000035094	-	99	79.461	Macaca_nemestrina
ENSHGLG00100011252	-	73	67.873	ENSMNEG00000036423	-	86	66.063	Macaca_nemestrina
ENSHGLG00100011252	-	96	81.119	ENSMLEG00000041902	-	99	79.798	Mandrillus_leucophaeus
ENSHGLG00100011252	-	91	50.903	ENSMAMG00000011034	smn1	94	50.542	Mastacembelus_armatus
ENSHGLG00100011252	-	92	45.556	ENSMZEG00005013634	smn1	94	50.182	Maylandia_zebra
ENSHGLG00100011252	-	66	54.639	ENSMGAG00000008889	-	95	53.093	Meleagris_gallopavo
ENSHGLG00100011252	-	98	77.931	ENSMAUG00000010262	Smn1	99	77.931	Mesocricetus_auratus
ENSHGLG00100011252	-	96	67.474	ENSMICG00000034708	-	100	75.000	Microcebus_murinus
ENSHGLG00100011252	-	98	77.931	ENSMOCG00000017833	Smn1	99	77.931	Microtus_ochrogaster
ENSHGLG00100011252	-	92	46.931	ENSMMOG00000005504	smn1	93	48.315	Mola_mola
ENSHGLG00100011252	-	97	65.398	ENSMODG00000001436	-	97	66.207	Monodelphis_domestica
ENSHGLG00100011252	-	91	47.826	ENSMALG00000008025	smn1	94	50.000	Monopterus_albus
ENSHGLG00100011252	-	98	78.694	MGP_CAROLIEiJ_G0018836	Smn1	99	78.694	Mus_caroli
ENSHGLG00100011252	-	98	77.663	ENSMUSG00000021645	Smn1	99	78.351	Mus_musculus
ENSHGLG00100011252	-	98	76.125	MGP_PahariEiJ_G0015911	Smn1	99	76.471	Mus_pahari
ENSHGLG00100011252	-	98	77.320	MGP_SPRETEiJ_G0019718	Smn1	99	78.007	Mus_spretus
ENSHGLG00100011252	-	95	82.686	ENSMPUG00000014470	-	98	81.625	Mustela_putorius_furo
ENSHGLG00100011252	-	96	78.571	ENSMLUG00000010603	-	96	78.033	Myotis_lucifugus
ENSHGLG00100011252	-	97	77.586	ENSNGAG00000019833	Smn1	98	77.586	Nannospalax_galili
ENSHGLG00100011252	-	92	48.561	ENSNBRG00000023000	smn1	94	51.095	Neolamprologus_brichardi
ENSHGLG00100011252	-	99	79.125	ENSNLEG00000004454	-	99	79.125	Nomascus_leucogenys
ENSHGLG00100011252	-	77	61.739	ENSMEUG00000011393	-	99	62.931	Notamacropus_eugenii
ENSHGLG00100011252	-	86	77.519	ENSOPRG00000002015	-	100	78.295	Ochotona_princeps
ENSHGLG00100011252	-	95	86.572	ENSODEG00000015976	-	97	86.572	Octodon_degus
ENSHGLG00100011252	-	93	47.857	ENSONIG00000011799	smn1	95	50.362	Oreochromis_niloticus
ENSHGLG00100011252	-	94	62.143	ENSOANG00000001626	-	96	61.733	Ornithorhynchus_anatinus
ENSHGLG00100011252	-	99	69.767	ENSOCUG00000025183	-	99	70.199	Oryctolagus_cuniculus
ENSHGLG00100011252	-	99	73.333	ENSOCUG00000026649	-	99	75.333	Oryctolagus_cuniculus
ENSHGLG00100011252	-	100	77.703	ENSOCUG00000017097	-	99	77.703	Oryctolagus_cuniculus
ENSHGLG00100011252	-	92	50.890	ENSORLG00000010552	smn1	94	51.439	Oryzias_latipes
ENSHGLG00100011252	-	92	49.635	ENSORLG00020007936	smn1	94	48.897	Oryzias_latipes_hni
ENSHGLG00100011252	-	54	57.143	ENSORLG00015022425	smn1	94	48.772	Oryzias_latipes_hsok
ENSHGLG00100011252	-	60	51.381	ENSOMEG00000007824	smn1	94	51.449	Oryzias_melastigma
ENSHGLG00100011252	-	91	71.025	ENSOGAG00000031414	-	97	70.690	Otolemur_garnettii
ENSHGLG00100011252	-	94	76.071	ENSOARG00000005425	-	100	76.071	Ovis_aries
ENSHGLG00100011252	-	96	80.420	ENSPPAG00000036640	-	99	79.125	Pan_paniscus
ENSHGLG00100011252	-	100	79.530	ENSPPRG00000005575	-	100	80.000	Panthera_pardus
ENSHGLG00100011252	-	100	79.264	ENSPTIG00000007745	-	100	79.433	Panthera_tigris_altaica
ENSHGLG00100011252	-	96	79.931	ENSPTRG00000016955	-	99	78.667	Pan_troglodytes
ENSHGLG00100011252	-	98	74.150	ENSPANG00000000253	-	98	74.490	Papio_anubis
ENSHGLG00100011252	-	99	79.798	ENSPANG00000013601	-	99	79.798	Papio_anubis
ENSHGLG00100011252	-	91	49.466	ENSPKIG00000011096	smn1	94	51.673	Paramormyrops_kingsleyae
ENSHGLG00100011252	-	91	57.651	ENSPSIG00000014787	-	87	56.940	Pelodiscus_sinensis
ENSHGLG00100011252	-	92	46.619	ENSPMGG00000012285	smn1	94	48.473	Periophthalmus_magnuspinnatus
ENSHGLG00100011252	-	91	41.219	ENSPMAG00000005004	smn1	99	39.867	Petromyzon_marinus
ENSHGLG00100011252	-	97	67.128	ENSPCIG00000025764	-	99	67.931	Phascolarctos_cinereus
ENSHGLG00100011252	-	92	50.355	ENSPFOG00000007786	smn1	94	50.000	Poecilia_formosa
ENSHGLG00100011252	-	92	50.741	ENSPLAG00000012071	smn1	94	50.362	Poecilia_latipinna
ENSHGLG00100011252	-	92	50.370	ENSPMEG00000017085	smn1	94	50.000	Poecilia_mexicana
ENSHGLG00100011252	-	92	51.064	ENSPREG00000005824	smn1	94	50.725	Poecilia_reticulata
ENSHGLG00100011252	-	91	78.676	ENSPPYG00000015533	-	96	78.676	Pongo_abelii
ENSHGLG00100011252	-	85	49.407	ENSPPYG00000019189	-	99	50.199	Pongo_abelii
ENSHGLG00100011252	-	91	74.453	ENSPCAG00000004187	-	100	74.088	Procavia_capensis
ENSHGLG00100011252	-	89	62.222	ENSPCOG00000022307	-	100	65.918	Propithecus_coquereli
ENSHGLG00100011252	-	96	81.754	ENSPVAG00000005977	-	100	80.808	Pteropus_vampyrus
ENSHGLG00100011252	-	92	48.561	ENSPNYG00000014148	smn1	94	51.095	Pundamilia_nyererei
ENSHGLG00100011252	-	93	47.670	ENSPNAG00000014007	smn1	83	49.455	Pygocentrus_nattereri
ENSHGLG00100011252	-	98	76.976	ENSRNOG00000018067	Smn1	99	76.976	Rattus_norvegicus
ENSHGLG00100011252	-	96	80.769	ENSRBIG00000037052	-	99	79.461	Rhinopithecus_bieti
ENSHGLG00100011252	-	95	66.431	ENSRBIG00000036775	-	95	66.784	Rhinopithecus_bieti
ENSHGLG00100011252	-	96	80.769	ENSRROG00000039399	-	99	79.461	Rhinopithecus_roxellana
ENSHGLG00100011252	-	99	65.541	ENSRROG00000031088	-	99	65.203	Rhinopithecus_roxellana
ENSHGLG00100011252	-	96	80.919	ENSSBOG00000011665	-	99	78.231	Saimiri_boliviensis_boliviensis
ENSHGLG00100011252	-	83	72.656	ENSSBOG00000020112	-	87	71.484	Saimiri_boliviensis_boliviensis
ENSHGLG00100011252	-	97	67.128	ENSSHAG00000001499	-	100	65.714	Sarcophilus_harrisii
ENSHGLG00100011252	-	92	49.451	ENSSFOG00015015507	smn1	94	51.282	Scleropages_formosus
ENSHGLG00100011252	-	92	48.551	ENSSMAG00000007922	smn1	94	48.201	Scophthalmus_maximus
ENSHGLG00100011252	-	92	47.518	ENSSDUG00000018533	smn1	94	49.462	Seriola_dumerili
ENSHGLG00100011252	-	92	47.872	ENSSLDG00000021135	smn1	94	49.821	Seriola_lalandi_dorsalis
ENSHGLG00100011252	-	91	61.765	ENSSPUG00000000373	-	93	62.271	Sphenodon_punctatus
ENSHGLG00100011252	-	92	51.971	ENSSPAG00000004345	smn1	94	50.542	Stegastes_partitus
ENSHGLG00100011252	-	96	60.563	ENSSSCG00000029127	-	98	61.775	Sus_scrofa
ENSHGLG00100011252	-	96	80.488	ENSSSCG00000016970	-	100	81.544	Sus_scrofa
ENSHGLG00100011252	-	71	56.190	ENSSSCG00000033865	-	95	58.019	Sus_scrofa
ENSHGLG00100011252	-	92	57.348	ENSTGUG00000001548	-	99	53.741	Taeniopygia_guttata
ENSHGLG00100011252	-	92	45.423	ENSTRUG00000000736	smn	96	44.891	Takifugu_rubripes
ENSHGLG00100011252	-	93	41.980	ENSTNIG00000009892	smn1	95	42.806	Tetraodon_nigroviridis
ENSHGLG00100011252	-	64	79.365	ENSTBEG00000002399	-	100	78.140	Tupaia_belangeri
ENSHGLG00100011252	-	96	76.842	ENSTTRG00000005080	-	99	76.351	Tursiops_truncatus
ENSHGLG00100011252	-	64	79.894	ENSUAMG00000024947	-	76	78.605	Ursus_americanus
ENSHGLG00100011252	-	96	83.566	ENSUMAG00000007842	-	74	82.492	Ursus_maritimus
ENSHGLG00100011252	-	91	70.111	ENSVPAG00000009887	-	99	69.892	Vicugna_pacos
ENSHGLG00100011252	-	96	82.867	ENSVVUG00000006934	-	100	81.818	Vulpes_vulpes
ENSHGLG00100011252	-	90	37.456	ENSXETG00000004912	-	78	63.333	Xenopus_tropicalis
ENSHGLG00100011252	-	93	56.940	ENSXETG00000018189	smn2	95	55.709	Xenopus_tropicalis
ENSHGLG00100011252	-	93	51.943	ENSXMAG00000001521	smn1	95	50.000	Xiphophorus_maculatus