EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100012072 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 2328 bases
Position: chrJH168392.1:707998-710325
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100016351	CSD	PF00313.22	4.2e-55	1	4
ENSHGLP00100016351	CSD	PF00313.22	4.2e-55	2	4
ENSHGLP00100016351	CSD	PF00313.22	4.2e-55	3	4
ENSHGLP00100016351	CSD	PF00313.22	4.2e-55	4	4
ENSHGLP00100016350	CSD	PF00313.22	5.2e-42	1	3
ENSHGLP00100016350	CSD	PF00313.22	5.2e-42	2	3
ENSHGLP00100016350	CSD	PF00313.22	5.2e-42	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100016530	-	2064	-	ENSHGLP00100016351	687 (aa)	-	-
ENSHGLT00100016529	-	1659	-	ENSHGLP00100016350	552 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100012072's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100012072's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100012072	-	98	80.734	ENSHGLG00100006910	-	100	80.734
ENSHGLG00100012072	-	99	77.049	ENSHGLG00100007287	-	98	77.049
ENSHGLG00100012072	-	100	85.007	ENSHGLG00100019438	-	100	85.007
ENSHGLG00100012072	-	98	77.803	ENSHGLG00100004833	-	100	77.803
ENSHGLG00100012072	-	100	71.032	ENSHGLG00100001846	-	100	71.032
ENSHGLG00100012072	-	99	73.826	ENSHGLG00100002245	-	99	73.351
ENSHGLG00100012072	-	94	74.718	ENSHGLG00100004195	-	99	74.718

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100012072	-	100	84.485	ENSG00000009307	CSDE1	100	100.000	Homo_sapiens
ENSHGLG00100012072	-	100	65.455	ENSAPOG00000015538	csde1	100	65.455	Acanthochromis_polyacanthus
ENSHGLG00100012072	-	100	83.943	ENSAMEG00000017129	CSDE1	94	83.943	Ailuropoda_melanoleuca
ENSHGLG00100012072	-	87	70.468	ENSACIG00000015175	csde1	99	70.468	Amphilophus_citrinellus
ENSHGLG00100012072	-	100	65.584	ENSAOCG00000011510	csde1	100	65.584	Amphiprion_ocellaris
ENSHGLG00100012072	-	100	65.584	ENSAPEG00000007194	csde1	100	65.584	Amphiprion_percula
ENSHGLG00100012072	-	100	65.540	ENSATEG00000003864	csde1	100	65.540	Anabas_testudineus
ENSHGLG00100012072	-	100	77.836	ENSAPLG00000008797	CSDE1	100	77.836	Anas_platyrhynchos
ENSHGLG00100012072	-	100	75.523	ENSACAG00000003120	CSDE1	100	74.937	Anolis_carolinensis
ENSHGLG00100012072	-	89	61.062	ENSANAG00000028396	-	93	64.684	Aotus_nancymaae
ENSHGLG00100012072	-	100	84.224	ENSANAG00000024665	CSDE1	95	84.224	Aotus_nancymaae
ENSHGLG00100012072	-	100	65.150	ENSACLG00000013296	csde1	100	65.150	Astatotilapia_calliptera
ENSHGLG00100012072	-	100	64.981	ENSAMXG00000007436	csde1	100	64.981	Astyanax_mexicanus
ENSHGLG00100012072	-	100	84.224	ENSBTAG00000000678	CSDE1	100	84.224	Bos_taurus
ENSHGLG00100012072	-	100	84.224	ENSCJAG00000012565	CSDE1	94	84.557	Callithrix_jacchus
ENSHGLG00100012072	-	98	84.309	ENSCAFG00000009618	CSDE1	94	84.309	Canis_familiaris
ENSHGLG00100012072	-	100	84.485	ENSCAFG00020000481	CSDE1	100	84.485	Canis_lupus_dingo
ENSHGLG00100012072	-	100	84.224	ENSCHIG00000017250	CSDE1	100	84.224	Capra_hircus
ENSHGLG00100012072	-	100	84.224	ENSTSYG00000003747	CSDE1	100	85.078	Carlito_syrichta
ENSHGLG00100012072	-	98	79.273	ENSCAPG00000015128	CSDE1	96	79.273	Cavia_aperea
ENSHGLG00100012072	-	98	86.888	ENSCPOG00000040388	CSDE1	97	86.888	Cavia_porcellus
ENSHGLG00100012072	-	92	72.539	ENSCCAG00000033677	-	99	72.457	Cebus_capucinus
ENSHGLG00100012072	-	98	70.766	ENSCCAG00000030878	-	91	70.766	Cebus_capucinus
ENSHGLG00100012072	-	100	84.224	ENSCCAG00000036794	CSDE1	100	85.301	Cebus_capucinus
ENSHGLG00100012072	-	100	84.485	ENSCATG00000036962	CSDE1	98	85.511	Cercocebus_atys
ENSHGLG00100012072	-	100	84.746	ENSCLAG00000006618	CSDE1	100	84.746	Chinchilla_lanigera
ENSHGLG00100012072	-	100	82.770	ENSCSAG00000001658	CSDE1	95	81.203	Chlorocebus_sabaeus
ENSHGLG00100012072	-	100	83.861	ENSCHOG00000000918	CSDE1	89	79.221	Choloepus_hoffmanni
ENSHGLG00100012072	-	100	78.357	ENSCPBG00000016547	CSDE1	100	78.357	Chrysemys_picta_bellii
ENSHGLG00100012072	-	97	37.915	ENSCING00000014465	-	94	37.915	Ciona_intestinalis
ENSHGLG00100012072	-	97	37.582	ENSCSAVG00000008100	-	99	36.052	Ciona_savignyi
ENSHGLG00100012072	-	100	84.485	ENSCANG00000035096	CSDE1	98	85.511	Colobus_angolensis_palliatus
ENSHGLG00100012072	-	94	78.428	ENSCANG00000031069	-	94	77.903	Colobus_angolensis_palliatus
ENSHGLG00100012072	-	100	72.349	ENSCGRG00001014011	-	100	72.349	Cricetulus_griseus_chok1gshd
ENSHGLG00100012072	-	100	84.355	ENSCGRG00001016833	-	100	84.355	Cricetulus_griseus_chok1gshd
ENSHGLG00100012072	-	98	85.078	ENSCGRG00000002225	-	100	85.078	Cricetulus_griseus_crigri
ENSHGLG00100012072	-	98	71.302	ENSCGRG00000005831	-	96	71.302	Cricetulus_griseus_crigri
ENSHGLG00100012072	-	100	65.020	ENSCSEG00000002620	csde1	100	65.020	Cynoglossus_semilaevis
ENSHGLG00100012072	-	100	64.286	ENSCVAG00000001344	csde1	100	64.286	Cyprinodon_variegatus
ENSHGLG00100012072	-	100	63.329	ENSDARG00000074758	csde1	100	63.329	Danio_rerio
ENSHGLG00100012072	-	100	84.245	ENSDNOG00000010287	-	93	84.245	Dasypus_novemcinctus
ENSHGLG00100012072	-	52	67.364	ENSDNOG00000034464	-	100	67.364	Dasypus_novemcinctus
ENSHGLG00100012072	-	100	82.126	ENSDORG00000011609	Csde1	100	82.186	Dipodomys_ordii
ENSHGLG00100012072	-	95	40.432	FBgn0263352	Unr	84	39.382	Drosophila_melanogaster
ENSHGLG00100012072	-	99	67.107	ENSETEG00000013678	-	99	67.107	Echinops_telfairi
ENSHGLG00100012072	-	95	60.877	ENSETEG00000007109	-	99	60.877	Echinops_telfairi
ENSHGLG00100012072	-	91	75.279	ENSETEG00000006280	-	100	75.279	Echinops_telfairi
ENSHGLG00100012072	-	81	94.815	ENSETEG00000002491	-	74	94.815	Echinops_telfairi
ENSHGLG00100012072	-	98	49.114	ENSEBUG00000008647	csde1	97	47.141	Eptatretus_burgeri
ENSHGLG00100012072	-	100	84.355	ENSEASG00005006284	CSDE1	100	81.078	Equus_asinus_asinus
ENSHGLG00100012072	-	100	84.355	ENSECAG00000020885	CSDE1	99	83.287	Equus_caballus
ENSHGLG00100012072	-	94	83.770	ENSEEUG00000006286	CSDE1	68	83.770	Erinaceus_europaeus
ENSHGLG00100012072	-	100	64.575	ENSELUG00000015507	csde1	100	64.575	Esox_lucius
ENSHGLG00100012072	-	100	84.746	ENSFCAG00000029266	CSDE1	100	84.746	Felis_catus
ENSHGLG00100012072	-	100	74.879	ENSFALG00000003407	CSDE1	100	74.812	Ficedula_albicollis
ENSHGLG00100012072	-	100	82.770	ENSFDAG00000007882	CSDE1	100	82.934	Fukomys_damarensis
ENSHGLG00100012072	-	98	64.456	ENSFHEG00000010799	csde1	99	64.456	Fundulus_heteroclitus
ENSHGLG00100012072	-	98	64.869	ENSGMOG00000012731	csde1	100	63.112	Gadus_morhua
ENSHGLG00100012072	-	98	74.425	ENSGALG00000002139	CSDE1	98	74.425	Gallus_gallus
ENSHGLG00100012072	-	93	64.177	ENSGAFG00000005241	csde1	95	64.177	Gambusia_affinis
ENSHGLG00100012072	-	98	64.437	ENSGACG00000004544	csde1	100	63.283	Gasterosteus_aculeatus
ENSHGLG00100012072	-	100	77.966	ENSGAGG00000017685	CSDE1	100	74.937	Gopherus_agassizii
ENSHGLG00100012072	-	100	84.485	ENSGGOG00000002164	CSDE1	100	84.485	Gorilla_gorilla
ENSHGLG00100012072	-	100	65.150	ENSHBUG00000020315	csde1	100	65.150	Haplochromis_burtoni
ENSHGLG00100012072	-	100	71.282	ENSHGLG00000019549	-	100	71.282	Heterocephalus_glaber_female
ENSHGLG00100012072	-	100	92.603	ENSHGLG00000003829	-	100	92.603	Heterocephalus_glaber_female
ENSHGLG00100012072	-	98	80.963	ENSHGLG00000010039	-	100	80.963	Heterocephalus_glaber_female
ENSHGLG00100012072	-	99	69.804	ENSHGLG00000000650	-	99	69.804	Heterocephalus_glaber_female
ENSHGLG00100012072	-	99	78.354	ENSHGLG00000008555	-	100	78.354	Heterocephalus_glaber_female
ENSHGLG00100012072	-	100	79.088	ENSHGLG00000009620	-	100	79.357	Heterocephalus_glaber_female
ENSHGLG00100012072	-	99	79.098	ENSHGLG00000007471	-	98	79.098	Heterocephalus_glaber_female
ENSHGLG00100012072	-	100	64.332	ENSHCOG00000004158	csde1	100	64.332	Hippocampus_comes
ENSHGLG00100012072	-	100	64.981	ENSIPUG00000000355	csde1	100	64.981	Ictalurus_punctatus
ENSHGLG00100012072	-	94	70.108	ENSSTOG00000032722	-	98	70.108	Ictidomys_tridecemlineatus
ENSHGLG00100012072	-	100	70.452	ENSSTOG00000030994	-	100	70.452	Ictidomys_tridecemlineatus
ENSHGLG00100012072	-	100	81.804	ENSJJAG00000019571	Csde1	100	82.036	Jaculus_jaculus
ENSHGLG00100012072	-	100	62.640	ENSKMAG00000005685	csde1	100	62.330	Kryptolebias_marmoratus
ENSHGLG00100012072	-	100	65.455	ENSLBEG00000014770	csde1	100	65.455	Labrus_bergylta
ENSHGLG00100012072	-	100	64.888	ENSLACG00000018452	CSDE1	94	64.888	Latimeria_chalumnae
ENSHGLG00100012072	-	100	65.621	ENSLOCG00000010413	csde1	94	65.621	Lepisosteus_oculatus
ENSHGLG00100012072	-	100	83.703	ENSLAFG00000007150	CSDE1	96	83.703	Loxodonta_africana
ENSHGLG00100012072	-	100	84.485	ENSMFAG00000003674	CSDE1	100	84.485	Macaca_fascicularis
ENSHGLG00100012072	-	100	84.485	ENSMMUG00000001974	CSDE1	99	85.714	Macaca_mulatta
ENSHGLG00100012072	-	100	84.485	ENSMNEG00000045247	CSDE1	98	85.511	Macaca_nemestrina
ENSHGLG00100012072	-	100	84.224	ENSMLEG00000038673	CSDE1	94	84.224	Mandrillus_leucophaeus
ENSHGLG00100012072	-	100	66.104	ENSMAMG00000008821	csde1	100	66.104	Mastacembelus_armatus
ENSHGLG00100012072	-	100	65.150	ENSMZEG00005021675	csde1	100	65.150	Maylandia_zebra
ENSHGLG00100012072	-	100	77.604	ENSMGAG00000016381	CSDE1	100	77.604	Meleagris_gallopavo
ENSHGLG00100012072	-	100	82.287	ENSMAUG00000014031	Csde1	100	82.335	Mesocricetus_auratus
ENSHGLG00100012072	-	100	84.355	ENSMICG00000002050	CSDE1	99	85.938	Microcebus_murinus
ENSHGLG00100012072	-	100	84.355	ENSMOCG00000018960	Csde1	100	84.355	Microtus_ochrogaster
ENSHGLG00100012072	-	100	65.455	ENSMMOG00000015075	csde1	100	65.455	Mola_mola
ENSHGLG00100012072	-	100	80.754	ENSMODG00000004685	CSDE1	100	78.321	Monodelphis_domestica
ENSHGLG00100012072	-	100	65.584	ENSMALG00000007132	csde1	100	65.584	Monopterus_albus
ENSHGLG00100012072	-	100	84.094	MGP_CAROLIEiJ_G0025444	Csde1	100	84.094	Mus_caroli
ENSHGLG00100012072	-	100	84.224	ENSMUSG00000068823	Csde1	100	84.224	Mus_musculus
ENSHGLG00100012072	-	100	84.485	MGP_PahariEiJ_G0026888	Csde1	100	84.485	Mus_pahari
ENSHGLG00100012072	-	100	84.485	MGP_SPRETEiJ_G0026394	Csde1	100	84.485	Mus_spretus
ENSHGLG00100012072	-	97	82.673	ENSMPUG00000005753	CSDE1	99	81.226	Mustela_putorius_furo
ENSHGLG00100012072	-	100	83.703	ENSMLUG00000005681	CSDE1	94	83.703	Myotis_lucifugus
ENSHGLG00100012072	-	98	63.048	ENSNGAG00000012599	-	100	63.048	Nannospalax_galili
ENSHGLG00100012072	-	100	82.287	ENSNGAG00000021929	Csde1	100	82.335	Nannospalax_galili
ENSHGLG00100012072	-	100	65.150	ENSNBRG00000020808	csde1	100	65.150	Neolamprologus_brichardi
ENSHGLG00100012072	-	100	84.355	ENSNLEG00000004842	CSDE1	97	84.355	Nomascus_leucogenys
ENSHGLG00100012072	-	97	79.605	ENSMEUG00000002677	CSDE1	100	77.527	Notamacropus_eugenii
ENSHGLG00100012072	-	98	80.952	ENSOPRG00000005002	CSDE1	82	80.952	Ochotona_princeps
ENSHGLG00100012072	-	98	63.341	ENSODEG00000005979	-	98	63.341	Octodon_degus
ENSHGLG00100012072	-	100	82.287	ENSODEG00000007383	-	100	82.485	Octodon_degus
ENSHGLG00100012072	-	98	63.948	ENSONIG00000009309	csde1	100	61.322	Oreochromis_niloticus
ENSHGLG00100012072	-	100	64.868	ENSOANG00000003346	-	100	64.868	Ornithorhynchus_anatinus
ENSHGLG00100012072	-	100	84.094	ENSOCUG00000016438	CSDE1	94	84.094	Oryctolagus_cuniculus
ENSHGLG00100012072	-	100	64.889	ENSORLG00000000707	csde1	100	64.889	Oryzias_latipes
ENSHGLG00100012072	-	100	62.406	ENSORLG00020005148	csde1	100	60.955	Oryzias_latipes_hni
ENSHGLG00100012072	-	100	64.759	ENSORLG00015019415	csde1	100	64.759	Oryzias_latipes_hsok
ENSHGLG00100012072	-	100	65.974	ENSOMEG00000015656	csde1	100	65.974	Oryzias_melastigma
ENSHGLG00100012072	-	100	84.746	ENSOGAG00000012127	CSDE1	94	84.746	Otolemur_garnettii
ENSHGLG00100012072	-	100	84.355	ENSOARG00000020034	CSDE1	94	84.355	Ovis_aries
ENSHGLG00100012072	-	100	84.485	ENSPPAG00000025861	CSDE1	100	84.485	Pan_paniscus
ENSHGLG00100012072	-	100	84.746	ENSPPRG00000006747	CSDE1	94	84.746	Panthera_pardus
ENSHGLG00100012072	-	100	84.746	ENSPTIG00000015468	CSDE1	100	81.454	Panthera_tigris_altaica
ENSHGLG00100012072	-	100	84.485	ENSPTRG00000033721	CSDE1	97	84.485	Pan_troglodytes
ENSHGLG00100012072	-	100	84.485	ENSPANG00000018873	CSDE1	100	84.485	Papio_anubis
ENSHGLG00100012072	-	100	65.410	ENSPKIG00000009459	csde1	100	65.410	Paramormyrops_kingsleyae
ENSHGLG00100012072	-	94	76.106	ENSPSIG00000003823	CSDE1	96	76.106	Pelodiscus_sinensis
ENSHGLG00100012072	-	100	65.065	ENSPMGG00000000772	csde1	100	65.065	Periophthalmus_magnuspinnatus
ENSHGLG00100012072	-	100	82.448	ENSPEMG00000020357	-	100	82.335	Peromyscus_maniculatus_bairdii
ENSHGLG00100012072	-	100	79.871	ENSPCIG00000022587	CSDE1	100	78.446	Phascolarctos_cinereus
ENSHGLG00100012072	-	98	62.783	ENSPFOG00000012664	csde1	100	61.646	Poecilia_formosa
ENSHGLG00100012072	-	97	57.296	ENSPLAG00000017680	csde1	93	57.525	Poecilia_latipinna
ENSHGLG00100012072	-	97	57.450	ENSPMEG00000005094	csde1	95	57.692	Poecilia_mexicana
ENSHGLG00100012072	-	100	62.017	ENSPREG00000011631	csde1	100	60.048	Poecilia_reticulata
ENSHGLG00100012072	-	100	82.986	ENSPPYG00000000996	CSDE1	100	81.078	Pongo_abelii
ENSHGLG00100012072	-	100	82.126	ENSPCAG00000014368	CSDE1	94	80.052	Procavia_capensis
ENSHGLG00100012072	-	89	70.370	ENSPCOG00000008223	-	91	67.164	Propithecus_coquereli
ENSHGLG00100012072	-	100	84.615	ENSPCOG00000017893	CSDE1	100	84.615	Propithecus_coquereli
ENSHGLG00100012072	-	100	80.834	ENSPVAG00000008225	CSDE1	95	80.834	Pteropus_vampyrus
ENSHGLG00100012072	-	100	65.150	ENSPNYG00000013745	csde1	100	65.150	Pundamilia_nyererei
ENSHGLG00100012072	-	100	65.455	ENSPNAG00000001958	csde1	100	65.455	Pygocentrus_nattereri
ENSHGLG00100012072	-	98	83.470	ENSRNOG00000061058	Csde1	100	81.203	Rattus_norvegicus
ENSHGLG00100012072	-	100	78.776	ENSRBIG00000038966	-	77	98.485	Rhinopithecus_bieti
ENSHGLG00100012072	-	100	82.940	ENSRBIG00000038088	-	99	85.023	Rhinopithecus_bieti
ENSHGLG00100012072	-	100	84.485	ENSRROG00000043101	CSDE1	98	85.308	Rhinopithecus_roxellana
ENSHGLG00100012072	-	100	84.224	ENSSBOG00000035592	CSDE1	95	84.224	Saimiri_boliviensis_boliviensis
ENSHGLG00100012072	-	100	81.617	ENSSHAG00000009831	CSDE1	100	81.617	Sarcophilus_harrisii
ENSHGLG00100012072	-	100	65.410	ENSSFOG00015007498	csde1	100	65.410	Scleropages_formosus
ENSHGLG00100012072	-	100	65.714	ENSSMAG00000007203	csde1	100	65.714	Scophthalmus_maximus
ENSHGLG00100012072	-	100	65.455	ENSSDUG00000015380	csde1	100	65.455	Seriola_dumerili
ENSHGLG00100012072	-	100	65.455	ENSSLDG00000008819	csde1	100	65.455	Seriola_lalandi_dorsalis
ENSHGLG00100012072	-	100	83.572	ENSSARG00000000738	CSDE1	94	83.572	Sorex_araneus
ENSHGLG00100012072	-	100	78.096	ENSSPUG00000008714	CSDE1	100	78.096	Sphenodon_punctatus
ENSHGLG00100012072	-	100	65.844	ENSSPAG00000000716	csde1	100	65.844	Stegastes_partitus
ENSHGLG00100012072	-	100	84.355	ENSSSCG00000006752	CSDE1	100	84.355	Sus_scrofa
ENSHGLG00100012072	-	100	74.093	ENSTGUG00000000972	CSDE1	100	74.093	Taeniopygia_guttata
ENSHGLG00100012072	-	100	62.630	ENSTRUG00000007996	csde1	100	62.630	Takifugu_rubripes
ENSHGLG00100012072	-	91	64.474	ENSTNIG00000010878	csde1	100	58.621	Tetraodon_nigroviridis
ENSHGLG00100012072	-	58	95.395	ENSTBEG00000011880	-	51	95.395	Tupaia_belangeri
ENSHGLG00100012072	-	100	83.703	ENSTTRG00000015583	CSDE1	94	83.703	Tursiops_truncatus
ENSHGLG00100012072	-	90	80.998	ENSUAMG00000024289	-	99	80.998	Ursus_americanus
ENSHGLG00100012072	-	85	83.858	ENSUAMG00000021779	-	100	81.350	Ursus_americanus
ENSHGLG00100012072	-	95	85.511	ENSUMAG00000011714	-	99	85.511	Ursus_maritimus
ENSHGLG00100012072	-	100	80.504	ENSUMAG00000009720	-	97	80.504	Ursus_maritimus
ENSHGLG00100012072	-	100	84.579	ENSVPAG00000000749	CSDE1	79	84.579	Vicugna_pacos
ENSHGLG00100012072	-	93	82.840	ENSVVUG00000009890	CSDE1	94	81.140	Vulpes_vulpes
ENSHGLG00100012072	-	100	69.413	ENSXETG00000021448	csde1	100	69.413	Xenopus_tropicalis
ENSHGLG00100012072	-	93	56.350	ENSXCOG00000000035	csde1	99	56.350	Xiphophorus_couchianus
ENSHGLG00100012072	-	98	64.987	ENSXMAG00000009080	csde1	98	64.987	Xiphophorus_maculatus