EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSHGLG00100012151 (Gene tree)
Gene ID
-
Gene Symbol
PABPC1L
Alias
C20orf119|PABPC1L1|dJ1069P2.3|ePAB
Full Name
poly(A) binding protein cytoplasmic 1 like
Gene Type
protein_coding
Species
Heterocephalus_glaber_male
Status
putative
Strand
Minus strand
Length
26695 bases
Position
chrJH169323.1:1109734-1136428
Accession
101704744
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSHGLP00100016459PABPPF00658.181.9e-2611
ENSHGLP00100016459RRM_5PF13893.61.3e-1111
ENSHGLP00100016459RRM_1PF00076.223.2e-8814
ENSHGLP00100016459RRM_1PF00076.223.2e-8824
ENSHGLP00100016459RRM_1PF00076.223.2e-8834
ENSHGLP00100016459RRM_1PF00076.223.2e-8844
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSHGLT00100016638PABPC1L-2013133-ENSHGLP00100016459613 (aa)XP_004858234UPI00034F379D
Gene Model
Click here to download ENSHGLG00100012151's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100012151's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSHGLG00100012151PABPC1L6133.735ENSHGLG00100002344ELAVL29933.735
ENSHGLG00100012151PABPC1L5930.526ENSHGLG00100000375-9330.526
ENSHGLG00100012151PABPC1L5935.450ENSHGLG00100008533SF3B45535.979
ENSHGLG00100012151PABPC1L5941.270ENSHGLG00100011200ELAVL39140.278
ENSHGLG00100012151PABPC1L6079.213ENSHGLG00100019506-10079.213
ENSHGLG00100012151PABPC1L5730.675ENSHGLG00100010504-5030.323
ENSHGLG00100012151PABPC1L5730.323ENSHGLG00100015974HNRNPA15930.323
ENSHGLG00100012151PABPC1L5436.047ENSHGLG00100010282CELF26636.047
ENSHGLG00100012151PABPC1L6433.735ENSHGLG00100017936RBM197432.000
ENSHGLG00100012151PABPC1L6071.429ENSHGLG00100020854-9871.429
ENSHGLG00100012151PABPC1L5034.884ENSHGLG00100006394CELF46536.986
ENSHGLG00100012151PABPC1L9759.622ENSHGLG00100000417-9758.803
ENSHGLG00100012151PABPC1L9865.780ENSHGLG00100007448-9765.780
ENSHGLG00100012151PABPC1L9963.265ENSHGLG00100001580PABPC49864.412
ENSHGLG00100012151PABPC1L5730.409ENSHGLG00100015062TIAL19330.409
ENSHGLG00100012151PABPC1L5035.294ENSHGLG00100008013CELF37634.247
ENSHGLG00100012151PABPC1L6262.259ENSHGLG00100020648PABPC4L9862.259
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSHGLG00100012151PABPC1L10083.710ENSG00000101104PABPC1L9990.432Homo_sapiens
ENSHGLG00100012151PABPC1L9864.412ENSAPOG00000010842pabpc1l9864.573Acanthochromis_polyacanthus
ENSHGLG00100012151PABPC1L9974.259ENSAMEG00000004099PABPC1L10074.259Ailuropoda_melanoleuca
ENSHGLG00100012151PABPC1L9966.592ENSACIG00000021004-10070.803Amphilophus_citrinellus
ENSHGLG00100012151PABPC1L9964.184ENSAOCG00000006167-9964.172Amphiprion_ocellaris
ENSHGLG00100012151PABPC1L9968.360ENSAPEG00000010558-9777.228Amphiprion_percula
ENSHGLG00100012151PABPC1L9965.971ENSATEG00000007428pabpc1l10065.971Anabas_testudineus
ENSHGLG00100012151PABPC1L9871.637ENSAPLG00000008415PABPC1L9871.729Anas_platyrhynchos
ENSHGLG00100012151PABPC1L9971.040ENSACAG00000011841PABPC1L9871.040Anolis_carolinensis
ENSHGLG00100012151PABPC1L10081.452ENSANAG00000026826PABPC1L10081.452Aotus_nancymaae
ENSHGLG00100012151PABPC1L9964.771ENSACLG00000024791pabpc1l10064.455Astatotilapia_calliptera
ENSHGLG00100012151PABPC1L9967.038ENSAMXG00000013552pabpc1l9966.561Astyanax_mexicanus
ENSHGLG00100012151PABPC1L5593.452ENSBTAG00000055300-10093.452Bos_taurus
ENSHGLG00100012151PABPC1L6773.852ENSBTAG00000016849PABPC1L8473.852Bos_taurus
ENSHGLG00100012151PABPC1L6074.713ENSCJAG00000038506-10074.713Callithrix_jacchus
ENSHGLG00100012151PABPC1L10081.935ENSCJAG00000017628PABPC1L10081.935Callithrix_jacchus
ENSHGLG00100012151PABPC1L9973.733ENSCAFG00000009573PABPC1L10073.190Canis_familiaris
ENSHGLG00100012151PABPC1L9982.602ENSCAFG00020013828PABPC1L9982.602Canis_lupus_dingo
ENSHGLG00100012151PABPC1L9780.528ENSCHIG00000025759PABPC1L9180.528Capra_hircus
ENSHGLG00100012151PABPC1L10080.806ENSTSYG00000006645PABPC1L10080.806Carlito_syrichta
ENSHGLG00100012151PABPC1L9989.617ENSCAPG00000014519PABPC1L10089.617Cavia_aperea
ENSHGLG00100012151PABPC1L10093.215ENSCPOG00000013633PABPC1L10093.215Cavia_porcellus
ENSHGLG00100012151PABPC1L10081.935ENSCCAG00000023338PABPC1L10081.935Cebus_capucinus
ENSHGLG00100012151PABPC1L10083.548ENSCATG00000034065PABPC1L10083.548Cercocebus_atys
ENSHGLG00100012151PABPC1L10092.892ENSCLAG00000005298PABPC1L10092.892Chinchilla_lanigera
ENSHGLG00100012151PABPC1L10083.710ENSCSAG00000014242PABPC1L10083.710Chlorocebus_sabaeus
ENSHGLG00100012151PABPC1L5378.788ENSCPBG00000007810-8378.788Chrysemys_picta_bellii
ENSHGLG00100012151PABPC1L7279.638ENSCPBG00000017755-9979.638Chrysemys_picta_bellii
ENSHGLG00100012151PABPC1L9748.497ENSCING00000002796-9750.000Ciona_intestinalis
ENSHGLG00100012151PABPC1L9756.073ENSCSAVG00000003102-10078.767Ciona_savignyi
ENSHGLG00100012151PABPC1L9759.024ENSCSAVG00000004246-8679.518Ciona_savignyi
ENSHGLG00100012151PABPC1L10079.173ENSCANG00000037530PABPC1L10079.173Colobus_angolensis_palliatus
ENSHGLG00100012151PABPC1L9977.273ENSCGRG00001021938Pabpc1l9977.273Cricetulus_griseus_chok1gshd
ENSHGLG00100012151PABPC1L9977.273ENSCGRG00000007946Pabpc1l9977.273Cricetulus_griseus_crigri
ENSHGLG00100012151PABPC1L9963.201ENSCSEG00000021295pabpc1l9963.036Cynoglossus_semilaevis
ENSHGLG00100012151PABPC1L9967.261ENSCVAG00000015943-8681.679Cyprinodon_variegatus
ENSHGLG00100012151PABPC1L9967.943ENSDARG00000002597pabpc1l8883.846Danio_rerio
ENSHGLG00100012151PABPC1L9983.683ENSDNOG00000048450PABPC1L9983.683Dasypus_novemcinctus
ENSHGLG00100012151PABPC1L9983.495ENSDORG00000001067Pabpc1l9983.495Dipodomys_ordii
ENSHGLG00100012151PABPC1L9686.585ENSETEG00000009969PABPC1L7386.585Echinops_telfairi
ENSHGLG00100012151PABPC1L5693.452ENSEASG00005023408-10093.452Equus_asinus_asinus
ENSHGLG00100012151PABPC1L5384.615ENSEASG00005023407-7381.111Equus_asinus_asinus
ENSHGLG00100012151PABPC1L6880.080ENSECAG00000040139-8980.080Equus_caballus
ENSHGLG00100012151PABPC1L10079.160ENSEEUG00000005978PABPC1L10079.160Erinaceus_europaeus
ENSHGLG00100012151PABPC1L9968.189ENSELUG00000001811pabpc1l10067.874Esox_lucius
ENSHGLG00100012151PABPC1L9983.415ENSFCAG00000011692PABPC1L9983.577Felis_catus
ENSHGLG00100012151PABPC1L8375.099ENSFALG00000005372PABPC1L8575.099Ficedula_albicollis
ENSHGLG00100012151PABPC1L10092.170ENSFDAG00000008291PABPC1L10091.517Fukomys_damarensis
ENSHGLG00100012151PABPC1L9966.451ENSFHEG00000003398pabpc1l9966.126Fundulus_heteroclitus
ENSHGLG00100012151PABPC1L9966.990ENSGMOG00000004437pabpc1l9866.990Gadus_morhua
ENSHGLG00100012151PABPC1L9868.503ENSGALG00000004123PABPC1L9882.022Gallus_gallus
ENSHGLG00100012151PABPC1L9962.787ENSGAFG00000021057pabpc1l9962.481Gambusia_affinis
ENSHGLG00100012151PABPC1L9964.320ENSGACG00000002792pabpc1l9964.160Gasterosteus_aculeatus
ENSHGLG00100012151PABPC1L9973.046ENSGAGG00000000589PABPC1L9682.955Gopherus_agassizii
ENSHGLG00100012151PABPC1L10083.871ENSGGOG00000004584PABPC1L10083.871Gorilla_gorilla
ENSHGLG00100012151PABPC1L9964.613ENSHBUG00000006134pabpc1l10064.297Haplochromis_burtoni
ENSHGLG00100012151PABPC1L100100.000ENSHGLG00000008434PABPC1L100100.000Heterocephalus_glaber_female
ENSHGLG00100012151PABPC1L9964.073ENSHCOG00000009270pabpc1l9964.833Hippocampus_comes
ENSHGLG00100012151PABPC1L6059.770ENSIPUG00000006780-8559.770Ictalurus_punctatus
ENSHGLG00100012151PABPC1L6059.195ENSIPUG00000006760-8859.195Ictalurus_punctatus
ENSHGLG00100012151PABPC1L9967.512ENSIPUG00000012602pabpc1l9967.195Ictalurus_punctatus
ENSHGLG00100012151PABPC1L10085.000ENSSTOG00000003739PABPC1L10085.000Ictidomys_tridecemlineatus
ENSHGLG00100012151PABPC1L9970.513ENSJJAG00000022406Pabpc1l9968.137Jaculus_jaculus
ENSHGLG00100012151PABPC1L9965.811ENSKMAG00000016847pabpc1l10065.329Kryptolebias_marmoratus
ENSHGLG00100012151PABPC1L9963.191ENSLBEG00000010084pabpc1l10063.349Labrus_bergylta
ENSHGLG00100012151PABPC1L9966.667ENSLACG00000005762PABPC1L9866.193Latimeria_chalumnae
ENSHGLG00100012151PABPC1L9968.530ENSLOCG00000007519pabpc1l9868.581Lepisosteus_oculatus
ENSHGLG00100012151PABPC1L9980.990ENSLAFG00000003553PABPC1L10080.990Loxodonta_africana
ENSHGLG00100012151PABPC1L10083.387ENSMFAG00000040365PABPC1L10083.387Macaca_fascicularis
ENSHGLG00100012151PABPC1L10081.059ENSMNEG00000032298PABPC1L10081.059Macaca_nemestrina
ENSHGLG00100012151PABPC1L10083.548ENSMLEG00000043139PABPC1L10083.548Mandrillus_leucophaeus
ENSHGLG00100012151PABPC1L9764.851ENSMAMG00000011854pabpc1l9764.851Mastacembelus_armatus
ENSHGLG00100012151PABPC1L9964.771ENSMZEG00005023713pabpc1l10064.455Maylandia_zebra
ENSHGLG00100012151PABPC1L9973.151ENSMGAG00000003674PABPC1L9873.151Meleagris_gallopavo
ENSHGLG00100012151PABPC1L9975.980ENSMOCG00000013186Pabpc1l9975.980Microtus_ochrogaster
ENSHGLG00100012151PABPC1L9965.751ENSMMOG00000020574-9082.308Mola_mola
ENSHGLG00100012151PABPC1L9475.298ENSMODG00000016198PABPC1L9975.331Monodelphis_domestica
ENSHGLG00100012151PABPC1L9763.339ENSMALG00000021622pabpc1l10063.339Monopterus_albus
ENSHGLG00100012151PABPC1L9976.672MGP_CAROLIEiJ_G0024627Pabpc1l9976.672Mus_caroli
ENSHGLG00100012151PABPC1L9976.346ENSMUSG00000054582Pabpc1l9976.346Mus_musculus
ENSHGLG00100012151PABPC1L9976.710MGP_PahariEiJ_G0026071Pabpc1l9976.710Mus_pahari
ENSHGLG00100012151PABPC1L9976.509MGP_SPRETEiJ_G0025549Pabpc1l9976.509Mus_spretus
ENSHGLG00100012151PABPC1L9981.190ENSMPUG00000017646PABPC1L9981.190Mustela_putorius_furo
ENSHGLG00100012151PABPC1L9876.329ENSMLUG00000006324PABPC1L9776.329Myotis_lucifugus
ENSHGLG00100012151PABPC1L9980.097ENSNGAG00000010458Pabpc1l9980.097Nannospalax_galili
ENSHGLG00100012151PABPC1L9964.809ENSNBRG00000016633pabpc1l10071.277Neolamprologus_brichardi
ENSHGLG00100012151PABPC1L10065.161ENSMEUG00000007905-10065.161Notamacropus_eugenii
ENSHGLG00100012151PABPC1L10081.159ENSOPRG00000011846PABPC1L10081.159Ochotona_princeps
ENSHGLG00100012151PABPC1L10081.301ENSODEG00000015482PABPC1L10081.301Octodon_degus
ENSHGLG00100012151PABPC1L5775.163ENSODEG00000002920-9275.163Octodon_degus
ENSHGLG00100012151PABPC1L9964.929ENSONIG00000017314pabpc1l10064.613Oreochromis_niloticus
ENSHGLG00100012151PABPC1L8965.116ENSOANG00000015793-10065.116Ornithorhynchus_anatinus
ENSHGLG00100012151PABPC1L9975.382ENSOCUG00000003005PABPC1L10075.382Oryctolagus_cuniculus
ENSHGLG00100012151PABPC1L9969.930ENSORLG00000010322pabpc1l10072.941Oryzias_latipes
ENSHGLG00100012151PABPC1L9969.930ENSORLG00020021193pabpc1l10072.941Oryzias_latipes_hni
ENSHGLG00100012151PABPC1L9969.930ENSORLG00015017018pabpc1l10071.765Oryzias_latipes_hsok
ENSHGLG00100012151PABPC1L9961.480ENSOMEG00000010789pabpc1l10061.178Oryzias_melastigma
ENSHGLG00100012151PABPC1L9980.794ENSOGAG00000032999PABPC1L10080.794Otolemur_garnettii
ENSHGLG00100012151PABPC1L9981.818ENSOARG00000004578PABPC1L9981.818Ovis_aries
ENSHGLG00100012151PABPC1L10083.548ENSPPAG00000039677PABPC1L10083.548Pan_paniscus
ENSHGLG00100012151PABPC1L6378.395ENSPPRG00000019327-9878.395Panthera_pardus
ENSHGLG00100012151PABPC1L9983.744ENSPTIG00000006524PABPC1L9983.908Panthera_tigris_altaica
ENSHGLG00100012151PABPC1L6390.123ENSPTRG00000013531PABPC1L9990.123Pan_troglodytes
ENSHGLG00100012151PABPC1L10083.548ENSPANG00000018788PABPC1L10083.548Papio_anubis
ENSHGLG00100012151PABPC1L9968.000ENSPKIG00000007322pabpc1l9967.840Paramormyrops_kingsleyae
ENSHGLG00100012151PABPC1L5379.231ENSPKIG00000016810-9379.231Paramormyrops_kingsleyae
ENSHGLG00100012151PABPC1L6879.856ENSPSIG00000013289PABPC1L9979.856Pelodiscus_sinensis
ENSHGLG00100012151PABPC1L6174.419ENSPMGG00000023117pabpc1l9281.061Periophthalmus_magnuspinnatus
ENSHGLG00100012151PABPC1L7264.141ENSPMGG00000023121-9264.141Periophthalmus_magnuspinnatus
ENSHGLG00100012151PABPC1L9976.672ENSPEMG00000020671Pabpc1l9976.672Peromyscus_maniculatus_bairdii
ENSHGLG00100012151PABPC1L9967.541ENSPFOG00000013241pabpc1l9966.992Poecilia_formosa
ENSHGLG00100012151PABPC1L9966.184ENSPLAG00000017490-10065.655Poecilia_latipinna
ENSHGLG00100012151PABPC1L9966.559ENSPMEG00000007677pabpc1l9966.236Poecilia_mexicana
ENSHGLG00100012151PABPC1L6674.877ENSPREG00000015886pabpc1l9974.877Poecilia_reticulata
ENSHGLG00100012151PABPC1L10083.871ENSPPYG00000011042PABPC1L10083.871Pongo_abelii
ENSHGLG00100012151PABPC1L6285.938ENSPCAG00000011787-7585.938Procavia_capensis
ENSHGLG00100012151PABPC1L9982.871ENSPCOG00000020630PABPC1L9982.871Propithecus_coquereli
ENSHGLG00100012151PABPC1L9980.195ENSPVAG00000012663PABPC1L9980.195Pteropus_vampyrus
ENSHGLG00100012151PABPC1L9963.961ENSPNYG00000004101pabpc1l10071.277Pundamilia_nyererei
ENSHGLG00100012151PABPC1L9961.404ENSPNAG00000021248pabpc1l9961.085Pygocentrus_nattereri
ENSHGLG00100012151PABPC1L9976.375ENSRNOG00000012750Pabpc1l10076.375Rattus_norvegicus
ENSHGLG00100012151PABPC1L10083.710ENSRBIG00000035381PABPC1L10083.710Rhinopithecus_bieti
ENSHGLG00100012151PABPC1L10083.387ENSRROG00000044498PABPC1L10083.387Rhinopithecus_roxellana
ENSHGLG00100012151PABPC1L10081.290ENSSBOG00000009532-10081.290Saimiri_boliviensis_boliviensis
ENSHGLG00100012151PABPC1L9969.838ENSSHAG00000011446PABPC1L10069.838Sarcophilus_harrisii
ENSHGLG00100012151PABPC1L9968.949ENSSFOG00015017304pabpc1l9968.790Scleropages_formosus
ENSHGLG00100012151PABPC1L9963.854ENSSMAG00000010516pabpc1l9882.171Scophthalmus_maximus
ENSHGLG00100012151PABPC1L9964.455ENSSDUG00000014743pabpc1l10064.455Seriola_dumerili
ENSHGLG00100012151PABPC1L9971.223ENSSLDG00000006981pabpc1l9576.555Seriola_lalandi_dorsalis
ENSHGLG00100012151PABPC1L9970.335ENSSPUG00000004233PABPC1L9870.335Sphenodon_punctatus
ENSHGLG00100012151PABPC1L9963.576ENSSPAG00000017137pabpc1l9963.742Stegastes_partitus
ENSHGLG00100012151PABPC1L9980.619ENSSSCG00000007382PABPC1L9980.619Sus_scrofa
ENSHGLG00100012151PABPC1L9970.295ENSTGUG00000005114PABPC1L9970.295Taeniopygia_guttata
ENSHGLG00100012151PABPC1L9765.253ENSTRUG00000011085pabpc1l9765.253Takifugu_rubripes
ENSHGLG00100012151PABPC1L10062.047ENSTNIG00000017903pabpc1l9962.047Tetraodon_nigroviridis
ENSHGLG00100012151PABPC1L9489.726ENSTBEG00000002851PABPC1L8089.726Tupaia_belangeri
ENSHGLG00100012151PABPC1L9479.897ENSTTRG00000007618PABPC1L10080.100Tursiops_truncatus
ENSHGLG00100012151PABPC1L9982.178ENSUAMG00000017682PABPC1L9982.178Ursus_americanus
ENSHGLG00100012151PABPC1L6987.534ENSUMAG00000025436PABPC1L9487.534Ursus_maritimus
ENSHGLG00100012151PABPC1L9989.723ENSVVUG00000018939PABPC1L9989.723Vulpes_vulpes
ENSHGLG00100012151PABPC1L9966.987ENSXETG00000022831pabpc1l9866.827Xenopus_tropicalis
ENSHGLG00100012151PABPC1L9969.811ENSXCOG00000005459pabpc1l9978.723Xiphophorus_couchianus
ENSHGLG00100012151PABPC1L9966.023ENSXMAG00000017135pabpc1l10065.495Xiphophorus_maculatus

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