EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100012166 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 6057 bases
Position: chrJH168286.1:659680-665736
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100016478	LSM	PF01423.22	3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100016657	-	288	-	ENSHGLP00100016478	95 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100012166's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100012166's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100012166	-	73	33.784	ENSHGLG00100000852	LSM7	72	33.784
ENSHGLG00100012166	-	99	92.632	ENSHGLG00100003934	-	95	92.632
ENSHGLG00100012166	-	76	33.333	ENSHGLG00100012152	-	64	33.333
ENSHGLG00100012166	-	92	32.184	ENSHGLG00100017660	LSM1	65	32.184

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100012166	-	100	95.833	ENSG00000128534	LSM8	100	95.833	Homo_sapiens
ENSHGLG00100012166	-	100	88.542	ENSAPOG00000008649	lsm8	100	88.542	Acanthochromis_polyacanthus
ENSHGLG00100012166	-	100	95.833	ENSAMEG00000001162	LSM8	100	95.833	Ailuropoda_melanoleuca
ENSHGLG00100012166	-	78	92.000	ENSACIG00000014694	lsm8	100	92.000	Amphilophus_citrinellus
ENSHGLG00100012166	-	100	88.542	ENSAOCG00000013926	lsm8	100	88.542	Amphiprion_ocellaris
ENSHGLG00100012166	-	100	88.542	ENSAPEG00000023502	lsm8	100	88.542	Amphiprion_percula
ENSHGLG00100012166	-	78	92.000	ENSATEG00000023432	lsm8	100	92.000	Anabas_testudineus
ENSHGLG00100012166	-	95	87.234	ENSAPLG00000005115	LSM8	95	87.234	Anas_platyrhynchos
ENSHGLG00100012166	-	100	95.833	ENSANAG00000027771	LSM8	100	95.833	Aotus_nancymaae
ENSHGLG00100012166	-	100	88.542	ENSACLG00000011253	lsm8	100	88.542	Astatotilapia_calliptera
ENSHGLG00100012166	-	100	90.625	ENSAMXG00000042902	lsm8	100	90.625	Astyanax_mexicanus
ENSHGLG00100012166	-	100	95.833	ENSBTAG00000012649	LSM8	100	95.833	Bos_taurus
ENSHGLG00100012166	-	98	56.383	WBGene00003082	lsm-8	96	56.383	Caenorhabditis_elegans
ENSHGLG00100012166	-	100	95.833	ENSCJAG00000046406	LSM8	100	95.833	Callithrix_jacchus
ENSHGLG00100012166	-	99	95.789	ENSCAFG00000016459	LSM8	96	95.789	Canis_familiaris
ENSHGLG00100012166	-	88	94.118	ENSCAFG00020012800	-	66	94.118	Canis_lupus_dingo
ENSHGLG00100012166	-	100	95.833	ENSCAFG00020007643	-	100	95.833	Canis_lupus_dingo
ENSHGLG00100012166	-	88	95.294	ENSCHIG00000014201	LSM8	90	95.294	Capra_hircus
ENSHGLG00100012166	-	100	95.833	ENSTSYG00000032434	LSM8	100	95.833	Carlito_syrichta
ENSHGLG00100012166	-	77	93.243	ENSCAPG00000008253	LSM8	100	93.243	Cavia_aperea
ENSHGLG00100012166	-	100	95.833	ENSCPOG00000035673	LSM8	100	95.833	Cavia_porcellus
ENSHGLG00100012166	-	100	95.833	ENSCCAG00000021329	LSM8	100	95.833	Cebus_capucinus
ENSHGLG00100012166	-	100	95.833	ENSCATG00000045302	LSM8	100	95.833	Cercocebus_atys
ENSHGLG00100012166	-	100	95.833	ENSCLAG00000003726	LSM8	100	95.833	Chinchilla_lanigera
ENSHGLG00100012166	-	100	91.667	ENSCSAG00000019007	-	100	91.667	Chlorocebus_sabaeus
ENSHGLG00100012166	-	100	95.833	ENSCSAG00000010802	-	100	95.833	Chlorocebus_sabaeus
ENSHGLG00100012166	-	88	95.294	ENSCPBG00000008154	LSM8	87	95.294	Chrysemys_picta_bellii
ENSHGLG00100012166	-	100	70.833	ENSCING00000024877	-	100	70.833	Ciona_intestinalis
ENSHGLG00100012166	-	100	95.833	ENSCANG00000040728	LSM8	100	95.833	Colobus_angolensis_palliatus
ENSHGLG00100012166	-	100	95.833	ENSCGRG00001000450	Lsm8	100	95.833	Cricetulus_griseus_chok1gshd
ENSHGLG00100012166	-	88	95.294	ENSCGRG00000005587	Lsm8	100	95.294	Cricetulus_griseus_crigri
ENSHGLG00100012166	-	100	77.083	ENSCSEG00000004164	lsm8	100	77.083	Cynoglossus_semilaevis
ENSHGLG00100012166	-	100	87.500	ENSCVAG00000020547	lsm8	100	87.500	Cyprinodon_variegatus
ENSHGLG00100012166	-	100	87.500	ENSDARG00000091656	lsm8	100	87.500	Danio_rerio
ENSHGLG00100012166	-	100	95.833	ENSDNOG00000034613	LSM8	100	95.833	Dasypus_novemcinctus
ENSHGLG00100012166	-	100	95.833	ENSDORG00000027868	Lsm8	100	95.833	Dipodomys_ordii
ENSHGLG00100012166	-	98	64.894	FBgn0035271	CG2021	99	64.894	Drosophila_melanogaster
ENSHGLG00100012166	-	100	94.792	ENSETEG00000011594	LSM8	100	94.792	Echinops_telfairi
ENSHGLG00100012166	-	77	86.486	ENSEBUG00000012017	lsm8	100	86.486	Eptatretus_burgeri
ENSHGLG00100012166	-	100	95.833	ENSEASG00005008932	LSM8	62	95.833	Equus_asinus_asinus
ENSHGLG00100012166	-	88	95.294	ENSECAG00000024025	LSM8	77	95.294	Equus_caballus
ENSHGLG00100012166	-	100	87.500	ENSELUG00000010138	lsm8	100	87.500	Esox_lucius
ENSHGLG00100012166	-	100	95.833	ENSFCAG00000036620	-	100	95.833	Felis_catus
ENSHGLG00100012166	-	84	73.171	ENSFCAG00000044794	-	82	73.171	Felis_catus
ENSHGLG00100012166	-	100	94.792	ENSFALG00000010023	LSM8	100	94.792	Ficedula_albicollis
ENSHGLG00100012166	-	100	95.833	ENSFDAG00000019530	LSM8	100	95.833	Fukomys_damarensis
ENSHGLG00100012166	-	100	88.542	ENSFHEG00000013729	lsm8	100	88.542	Fundulus_heteroclitus
ENSHGLG00100012166	-	100	94.792	ENSGALG00000009110	LSM8	100	94.792	Gallus_gallus
ENSHGLG00100012166	-	100	87.500	ENSGAFG00000001135	lsm8	100	87.500	Gambusia_affinis
ENSHGLG00100012166	-	100	95.833	ENSGAGG00000017366	LSM8	100	95.833	Gopherus_agassizii
ENSHGLG00100012166	-	100	95.833	ENSGGOG00000041883	LSM8	100	95.833	Gorilla_gorilla
ENSHGLG00100012166	-	100	88.542	ENSHBUG00000003646	lsm8	100	88.542	Haplochromis_burtoni
ENSHGLG00100012166	-	100	89.583	ENSHGLG00000019782	-	100	89.583	Heterocephalus_glaber_female
ENSHGLG00100012166	-	71	94.118	ENSHGLG00000001988	-	99	94.118	Heterocephalus_glaber_female
ENSHGLG00100012166	-	100	87.500	ENSHCOG00000005037	lsm8	100	87.500	Hippocampus_comes
ENSHGLG00100012166	-	100	90.625	ENSIPUG00000019811	NAA38	100	90.625	Ictalurus_punctatus
ENSHGLG00100012166	-	92	85.227	ENSSTOG00000034801	-	81	85.227	Ictidomys_tridecemlineatus
ENSHGLG00100012166	-	100	95.833	ENSSTOG00000009039	LSM8	100	95.833	Ictidomys_tridecemlineatus
ENSHGLG00100012166	-	100	95.833	ENSJJAG00000009031	Lsm8	99	95.833	Jaculus_jaculus
ENSHGLG00100012166	-	100	88.542	ENSKMAG00000018983	lsm8	100	88.542	Kryptolebias_marmoratus
ENSHGLG00100012166	-	100	90.625	ENSLACG00000010231	LSM8	100	90.625	Latimeria_chalumnae
ENSHGLG00100012166	-	100	89.583	ENSLOCG00000015580	lsm8	100	89.583	Lepisosteus_oculatus
ENSHGLG00100012166	-	100	94.845	ENSLAFG00000011242	LSM8	100	94.845	Loxodonta_africana
ENSHGLG00100012166	-	100	95.833	ENSMFAG00000035798	LSM8	100	95.833	Macaca_fascicularis
ENSHGLG00100012166	-	100	91.667	ENSMFAG00000013044	-	100	91.667	Macaca_fascicularis
ENSHGLG00100012166	-	100	95.833	ENSMMUG00000046401	LSM8	100	91.892	Macaca_mulatta
ENSHGLG00100012166	-	100	95.833	ENSMNEG00000036764	-	100	95.833	Macaca_nemestrina
ENSHGLG00100012166	-	78	90.667	ENSMNEG00000011141	-	100	90.667	Macaca_nemestrina
ENSHGLG00100012166	-	100	80.208	ENSMLEG00000039324	-	100	80.208	Mandrillus_leucophaeus
ENSHGLG00100012166	-	100	95.833	ENSMLEG00000035828	-	100	95.833	Mandrillus_leucophaeus
ENSHGLG00100012166	-	78	92.000	ENSMAMG00000018839	lsm8	100	92.000	Mastacembelus_armatus
ENSHGLG00100012166	-	100	88.542	ENSMZEG00005019138	lsm8	100	88.542	Maylandia_zebra
ENSHGLG00100012166	-	100	94.792	ENSMGAG00000008808	LSM8	100	94.792	Meleagris_gallopavo
ENSHGLG00100012166	-	100	76.842	ENSMAUG00000015356	-	100	76.842	Mesocricetus_auratus
ENSHGLG00100012166	-	75	88.889	ENSMAUG00000020287	-	100	86.486	Mesocricetus_auratus
ENSHGLG00100012166	-	100	88.542	ENSMAUG00000015721	-	100	88.542	Mesocricetus_auratus
ENSHGLG00100012166	-	100	95.833	ENSMICG00000042730	LSM8	100	95.833	Microcebus_murinus
ENSHGLG00100012166	-	100	95.833	ENSMOCG00000001688	Lsm8	100	95.833	Microtus_ochrogaster
ENSHGLG00100012166	-	78	92.000	ENSMMOG00000006046	lsm8	100	92.000	Mola_mola
ENSHGLG00100012166	-	76	81.333	ENSMODG00000015729	LSM8	96	81.333	Monodelphis_domestica
ENSHGLG00100012166	-	100	89.583	ENSMALG00000000405	lsm8	100	89.583	Monopterus_albus
ENSHGLG00100012166	-	100	95.833	MGP_CAROLIEiJ_G0028125	-	100	95.833	Mus_caroli
ENSHGLG00100012166	-	100	95.833	ENSMUSG00000044155	Lsm8	100	95.833	Mus_musculus
ENSHGLG00100012166	-	100	95.833	MGP_PahariEiJ_G0021881	Lsm8	100	95.833	Mus_pahari
ENSHGLG00100012166	-	100	95.833	MGP_SPRETEiJ_G0029125	-	100	95.833	Mus_spretus
ENSHGLG00100012166	-	100	95.833	ENSMLUG00000006837	-	100	95.833	Myotis_lucifugus
ENSHGLG00100012166	-	100	94.792	ENSMLUG00000027762	-	100	94.792	Myotis_lucifugus
ENSHGLG00100012166	-	100	95.833	ENSNGAG00000016554	Lsm8	100	95.833	Nannospalax_galili
ENSHGLG00100012166	-	100	88.542	ENSNBRG00000014441	lsm8	100	88.542	Neolamprologus_brichardi
ENSHGLG00100012166	-	100	95.833	ENSNLEG00000011768	LSM8	100	95.833	Nomascus_leucogenys
ENSHGLG00100012166	-	100	86.316	ENSMEUG00000007801	LSM8	100	86.316	Notamacropus_eugenii
ENSHGLG00100012166	-	88	95.294	ENSOPRG00000014809	LSM8	100	95.294	Ochotona_princeps
ENSHGLG00100012166	-	89	79.070	ENSODEG00000020290	-	100	79.070	Octodon_degus
ENSHGLG00100012166	-	100	95.833	ENSODEG00000000418	-	100	95.833	Octodon_degus
ENSHGLG00100012166	-	100	94.792	ENSOANG00000014536	LSM8	100	94.792	Ornithorhynchus_anatinus
ENSHGLG00100012166	-	100	94.845	ENSOCUG00000017359	LSM8	100	94.845	Oryctolagus_cuniculus
ENSHGLG00100012166	-	100	78.125	ENSORLG00000017432	lsm8	100	78.125	Oryzias_latipes
ENSHGLG00100012166	-	100	78.125	ENSORLG00020004376	lsm8	100	78.125	Oryzias_latipes_hni
ENSHGLG00100012166	-	100	88.542	ENSORLG00015003757	lsm8	100	88.542	Oryzias_latipes_hsok
ENSHGLG00100012166	-	100	76.042	ENSOMEG00000022509	lsm8	100	77.083	Oryzias_melastigma
ENSHGLG00100012166	-	100	95.833	ENSOGAG00000013377	LSM8	100	95.833	Otolemur_garnettii
ENSHGLG00100012166	-	100	95.833	ENSOARG00000017974	LSM8	100	95.833	Ovis_aries
ENSHGLG00100012166	-	78	94.667	ENSPPAG00000043228	-	100	94.667	Pan_paniscus
ENSHGLG00100012166	-	100	95.833	ENSPPRG00000006444	LSM8	100	95.833	Panthera_pardus
ENSHGLG00100012166	-	100	95.833	ENSPTIG00000004722	LSM8	100	95.833	Panthera_tigris_altaica
ENSHGLG00100012166	-	78	94.667	ENSPTRG00000046596	-	100	94.667	Pan_troglodytes
ENSHGLG00100012166	-	100	95.833	ENSPANG00000035470	-	100	95.833	Papio_anubis
ENSHGLG00100012166	-	100	89.583	ENSPANG00000019395	-	100	89.583	Papio_anubis
ENSHGLG00100012166	-	88	92.941	ENSPKIG00000006092	lsm8	86	92.941	Paramormyrops_kingsleyae
ENSHGLG00100012166	-	78	94.667	ENSPSIG00000017054	LSM8	100	94.667	Pelodiscus_sinensis
ENSHGLG00100012166	-	78	92.000	ENSPMGG00000016442	lsm8	100	92.000	Periophthalmus_magnuspinnatus
ENSHGLG00100012166	-	77	91.892	ENSPEMG00000009153	Lsm8	100	91.892	Peromyscus_maniculatus_bairdii
ENSHGLG00100012166	-	97	95.699	ENSPCIG00000021467	LSM8	98	95.699	Phascolarctos_cinereus
ENSHGLG00100012166	-	100	87.500	ENSPFOG00000012340	lsm8	100	87.500	Poecilia_formosa
ENSHGLG00100012166	-	88	89.412	ENSPLAG00000000516	lsm8	89	89.412	Poecilia_latipinna
ENSHGLG00100012166	-	100	87.500	ENSPMEG00000022567	lsm8	100	87.500	Poecilia_mexicana
ENSHGLG00100012166	-	76	80.000	ENSPREG00000005527	lsm8	72	80.000	Poecilia_reticulata
ENSHGLG00100012166	-	100	95.833	ENSPPYG00000017942	LSM8	100	95.833	Pongo_abelii
ENSHGLG00100012166	-	100	95.833	ENSPCOG00000003309	-	100	95.833	Propithecus_coquereli
ENSHGLG00100012166	-	99	73.684	ENSPCOG00000017982	-	99	73.684	Propithecus_coquereli
ENSHGLG00100012166	-	88	94.118	ENSPVAG00000000990	LSM8	100	94.118	Pteropus_vampyrus
ENSHGLG00100012166	-	100	88.542	ENSPNYG00000011448	lsm8	100	88.542	Pundamilia_nyererei
ENSHGLG00100012166	-	100	90.625	ENSPNAG00000010252	lsm8	100	90.625	Pygocentrus_nattereri
ENSHGLG00100012166	-	100	95.833	ENSRNOG00000058677	Lsm8	100	95.833	Rattus_norvegicus
ENSHGLG00100012166	-	100	95.833	ENSRBIG00000032851	LSM8	100	95.833	Rhinopithecus_bieti
ENSHGLG00100012166	-	100	95.833	ENSRROG00000039618	LSM8	100	95.833	Rhinopithecus_roxellana
ENSHGLG00100012166	-	100	95.833	ENSSBOG00000023223	LSM8	100	95.833	Saimiri_boliviensis_boliviensis
ENSHGLG00100012166	-	100	95.833	ENSSHAG00000018435	-	100	95.833	Sarcophilus_harrisii
ENSHGLG00100012166	-	100	87.500	ENSSFOG00015004412	lsm8	100	87.500	Scleropages_formosus
ENSHGLG00100012166	-	78	92.000	ENSSMAG00000009458	lsm8	100	92.000	Scophthalmus_maximus
ENSHGLG00100012166	-	100	88.542	ENSSDUG00000014702	lsm8	100	88.542	Seriola_dumerili
ENSHGLG00100012166	-	78	92.000	ENSSLDG00000016870	lsm8	100	92.000	Seriola_lalandi_dorsalis
ENSHGLG00100012166	-	75	94.444	ENSSARG00000009628	-	100	94.444	Sorex_araneus
ENSHGLG00100012166	-	100	95.833	ENSSPUG00000017419	LSM8	100	95.833	Sphenodon_punctatus
ENSHGLG00100012166	-	100	88.542	ENSSPAG00000021422	lsm8	100	88.542	Stegastes_partitus
ENSHGLG00100012166	-	100	95.833	ENSSSCG00000021652	LSM8	100	95.833	Sus_scrofa
ENSHGLG00100012166	-	100	92.708	ENSTGUG00000016823	-	100	92.708	Taeniopygia_guttata
ENSHGLG00100012166	-	100	93.750	ENSTGUG00000004730	-	100	93.750	Taeniopygia_guttata
ENSHGLG00100012166	-	100	88.542	ENSTRUG00000025192	lsm8	100	88.542	Takifugu_rubripes
ENSHGLG00100012166	-	100	88.542	ENSTNIG00000002864	lsm8	100	88.542	Tetraodon_nigroviridis
ENSHGLG00100012166	-	100	95.833	ENSTTRG00000001023	LSM8	100	95.833	Tursiops_truncatus
ENSHGLG00100012166	-	92	92.045	ENSUAMG00000006943	-	92	92.045	Ursus_americanus
ENSHGLG00100012166	-	92	92.045	ENSUMAG00000003073	LSM8	94	92.045	Ursus_maritimus
ENSHGLG00100012166	-	100	95.833	ENSVPAG00000001530	LSM8	100	95.833	Vicugna_pacos
ENSHGLG00100012166	-	78	92.000	ENSVVUG00000013248	-	82	92.000	Vulpes_vulpes
ENSHGLG00100012166	-	93	92.135	ENSXETG00000021829	lsm8	92	92.135	Xenopus_tropicalis
ENSHGLG00100012166	-	100	85.417	ENSXCOG00000012938	lsm8	100	85.417	Xiphophorus_couchianus
ENSHGLG00100012166	-	100	87.500	ENSXMAG00000025919	lsm8	100	87.500	Xiphophorus_maculatus