EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSHGLG00100012362 (Gene tree)
Gene ID
-
Gene Symbol
PUF60
Alias
FIR|RoBPI|SIAHBP1
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Heterocephalus_glaber_male
Status
putative
Strand
Plus strand
Length
14740 bases
Position
chrJH167268.1:19137-33876
Accession
101711469
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSHGLP00100016752RRM_1PF00076.221.5e-4312
ENSHGLP00100016752RRM_1PF00076.221.5e-4322
ENSHGLP00100016751RRM_1PF00076.221.7e-4312
ENSHGLP00100016751RRM_1PF00076.221.7e-4322
ENSHGLP00100016753RRM_1PF00076.221.7e-4312
ENSHGLP00100016753RRM_1PF00076.221.7e-4322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSHGLT00100016931-2518-ENSHGLP00100016751564 (aa)XP_004837850A0A0P6JIK7
ENSHGLT00100016933-1695-ENSHGLP00100016753564 (aa)XP_004837850A0A0P6JIK7
ENSHGLT00100016932-1865XM_004837794ENSHGLP00100016752547 (aa)XP_004837851UPI00034FBF8B
Gene Model
Click here to download ENSHGLG00100012362's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100012362's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSHGLG00100012362PUF605237.662ENSHGLG00100008245-6737.662
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSHGLG00100012362PUF6010098.227ENSG00000179950PUF6010099.225Homo_sapiens
ENSHGLG00100012362PUF609385.606ENSAPOG00000001713puf60b9985.606Acanthochromis_polyacanthus
ENSHGLG00100012362PUF609995.915ENSAMEG00000006406PUF609995.915Ailuropoda_melanoleuca
ENSHGLG00100012362PUF609177.543ENSACIG00000003263-9977.969Amphilophus_citrinellus
ENSHGLG00100012362PUF609185.413ENSACIG00000021705puf60b10085.413Amphilophus_citrinellus
ENSHGLG00100012362PUF609385.579ENSAOCG00000005395puf60b10086.372Amphiprion_ocellaris
ENSHGLG00100012362PUF609381.559ENSAOCG00000015558-9982.129Amphiprion_ocellaris
ENSHGLG00100012362PUF609382.779ENSAPEG00000011923puf60b9982.779Amphiprion_percula
ENSHGLG00100012362PUF609175.595ENSAPEG00000001836-9976.863Amphiprion_percula
ENSHGLG00100012362PUF609385.606ENSATEG00000001730puf60b9985.606Anabas_testudineus
ENSHGLG00100012362PUF609381.333ENSATEG00000006303-9981.714Anabas_testudineus
ENSHGLG00100012362PUF609398.659ENSAPLG00000010150PUF6010098.659Anas_platyrhynchos
ENSHGLG00100012362PUF609296.756ENSACAG00000001645PUF609796.395Anolis_carolinensis
ENSHGLG00100012362PUF6010098.936ENSANAG00000018626PUF6010099.225Aotus_nancymaae
ENSHGLG00100012362PUF609185.413ENSACLG00000004462puf60b10085.413Astatotilapia_calliptera
ENSHGLG00100012362PUF609176.636ENSAMXG00000041030puf60b10074.906Astyanax_mexicanus
ENSHGLG00100012362PUF609285.127ENSAMXG00000036570puf60a9784.932Astyanax_mexicanus
ENSHGLG00100012362PUF6010098.936ENSBTAG00000037493PUF6010098.936Bos_taurus
ENSHGLG00100012362PUF607651.155WBGene00004389rnp-68951.961Caenorhabditis_elegans
ENSHGLG00100012362PUF6010099.291ENSCJAG00000021485PUF6010099.291Callithrix_jacchus
ENSHGLG00100012362PUF6010098.720ENSCAFG00000001400PUF6010098.720Canis_familiaris
ENSHGLG00100012362PUF6010098.759ENSCAFG00020018754PUF6010098.759Canis_lupus_dingo
ENSHGLG00100012362PUF609998.201ENSCHIG00000001618PUF609298.201Capra_hircus
ENSHGLG00100012362PUF6010099.468ENSTSYG00000011912PUF6010099.612Carlito_syrichta
ENSHGLG00100012362PUF609993.238ENSCPOG00000014613PUF609992.883Cavia_porcellus
ENSHGLG00100012362PUF6010098.936ENSCCAG00000007744PUF6010098.936Cebus_capucinus
ENSHGLG00100012362PUF6010098.227ENSCATG00000035405PUF6010098.227Cercocebus_atys
ENSHGLG00100012362PUF6010099.645ENSCLAG00000009154PUF6010099.645Chinchilla_lanigera
ENSHGLG00100012362PUF609199.225ENSCSAG00000008878PUF6010099.225Chlorocebus_sabaeus
ENSHGLG00100012362PUF609398.659ENSCPBG00000005595PUF609898.659Chrysemys_picta_bellii
ENSHGLG00100012362PUF605763.043ENSCING00000002156-8763.043Ciona_intestinalis
ENSHGLG00100012362PUF609248.876ENSCING00000008436-9848.956Ciona_intestinalis
ENSHGLG00100012362PUF608955.747ENSCSAVG00000001385-9955.385Ciona_savignyi
ENSHGLG00100012362PUF608950.820ENSCSAVG00000004765-9750.412Ciona_savignyi
ENSHGLG00100012362PUF608098.182ENSCANG00000041843PUF6010099.520Colobus_angolensis_palliatus
ENSHGLG00100012362PUF6010098.936ENSCGRG00001017442Puf6010098.936Cricetulus_griseus_chok1gshd
ENSHGLG00100012362PUF609997.842ENSCGRG00000003717Puf609997.842Cricetulus_griseus_crigri
ENSHGLG00100012362PUF609881.622ENSCSEG00000019887puf60b9384.820Cynoglossus_semilaevis
ENSHGLG00100012362PUF609175.296ENSCSEG00000014845-8977.470Cynoglossus_semilaevis
ENSHGLG00100012362PUF608480.211ENSCVAG00000001560-9879.958Cyprinodon_variegatus
ENSHGLG00100012362PUF609184.453ENSCVAG00000009386puf60b10085.605Cyprinodon_variegatus
ENSHGLG00100012362PUF609179.135ENSDARG00000001241puf60b9996.032Danio_rerio
ENSHGLG00100012362PUF609186.742ENSDARG00000032175puf60a9994.043Danio_rerio
ENSHGLG00100012362PUF609981.250ENSDNOG00000043278PUF609881.250Dasypus_novemcinctus
ENSHGLG00100012362PUF609998.561ENSDORG00000004585Puf6010098.561Dipodomys_ordii
ENSHGLG00100012362PUF608950.796FBgn0028577hfp8658.580Drosophila_melanogaster
ENSHGLG00100012362PUF608972.485ENSEBUG00000005470-8872.222Eptatretus_burgeri
ENSHGLG00100012362PUF609362.995ENSEBUG00000014291puf60b8566.087Eptatretus_burgeri
ENSHGLG00100012362PUF6010098.759ENSEASG00005009695PUF6010098.759Equus_asinus_asinus
ENSHGLG00100012362PUF609998.921ENSECAG00000024681PUF609998.921Equus_caballus
ENSHGLG00100012362PUF609383.491ENSELUG00000006507puf60b9980.403Esox_lucius
ENSHGLG00100012362PUF609583.853ENSELUG00000018443-9985.799Esox_lucius
ENSHGLG00100012362PUF6010099.113ENSFCAG00000001045PUF6010099.225Felis_catus
ENSHGLG00100012362PUF609386.015ENSFALG00000001136PUF609887.165Ficedula_albicollis
ENSHGLG00100012362PUF60100100.000ENSFDAG00000017177PUF60100100.000Fukomys_damarensis
ENSHGLG00100012362PUF608879.518ENSFHEG00000021687PUF6010080.368Fundulus_heteroclitus
ENSHGLG00100012362PUF609384.250ENSFHEG00000020046puf60b10085.988Fundulus_heteroclitus
ENSHGLG00100012362PUF609371.617ENSGMOG00000006392puf60b10070.865Gadus_morhua
ENSHGLG00100012362PUF606198.547ENSGALG00000039901PUF609498.547Gallus_gallus
ENSHGLG00100012362PUF609383.491ENSGAFG00000021040puf60b10085.413Gambusia_affinis
ENSHGLG00100012362PUF609179.840ENSGAFG00000004334-9979.242Gambusia_affinis
ENSHGLG00100012362PUF609373.535ENSGACG00000004717puf60b9872.865Gasterosteus_aculeatus
ENSHGLG00100012362PUF609170.986ENSGACG00000001484-10069.615Gasterosteus_aculeatus
ENSHGLG00100012362PUF609398.659ENSGAGG00000013289PUF609298.659Gopherus_agassizii
ENSHGLG00100012362PUF6010098.227ENSGGOG00000004646PUF6010098.227Gorilla_gorilla
ENSHGLG00100012362PUF609381.973ENSHBUG00000009634-10082.937Haplochromis_burtoni
ENSHGLG00100012362PUF609384.820ENSHBUG00000015118puf60b10085.413Haplochromis_burtoni
ENSHGLG00100012362PUF60100100.000ENSHGLG00000006111PUF60100100.000Heterocephalus_glaber_female
ENSHGLG00100012362PUF609282.136ENSHCOG00000015541puf60b10081.734Hippocampus_comes
ENSHGLG00100012362PUF609066.798ENSHCOG00000000378-9965.038Hippocampus_comes
ENSHGLG00100012362PUF609178.947ENSIPUG00000004660puf60b9978.719Ictalurus_punctatus
ENSHGLG00100012362PUF609381.907ENSIPUG00000002453puf60a9982.609Ictalurus_punctatus
ENSHGLG00100012362PUF6010098.582ENSSTOG00000025037PUF6010098.582Ictidomys_tridecemlineatus
ENSHGLG00100012362PUF6010098.759ENSJJAG00000001076Puf6010098.759Jaculus_jaculus
ENSHGLG00100012362PUF609178.261ENSKMAG00000010106-10075.746Kryptolebias_marmoratus
ENSHGLG00100012362PUF609184.837ENSKMAG00000016745puf60b10085.988Kryptolebias_marmoratus
ENSHGLG00100012362PUF609583.117ENSLBEG00000012505puf60b10083.117Labrus_bergylta
ENSHGLG00100012362PUF606790.710ENSLACG00000005456PUF6010090.437Latimeria_chalumnae
ENSHGLG00100012362PUF609489.831ENSLOCG00000010106puf60b9989.734Lepisosteus_oculatus
ENSHGLG00100012362PUF609995.382ENSLAFG00000022929PUF6010095.382Loxodonta_africana
ENSHGLG00100012362PUF6010098.227ENSMFAG00000043373PUF6010098.227Macaca_fascicularis
ENSHGLG00100012362PUF6010098.404ENSMMUG00000013558PUF6010098.404Macaca_mulatta
ENSHGLG00100012362PUF6010098.227ENSMNEG00000031099PUF6010098.227Macaca_nemestrina
ENSHGLG00100012362PUF609199.225ENSMLEG00000040009PUF6010099.225Mandrillus_leucophaeus
ENSHGLG00100012362PUF609382.732ENSMAMG00000019476-9982.353Mastacembelus_armatus
ENSHGLG00100012362PUF609385.150ENSMAMG00000010394puf60b10083.738Mastacembelus_armatus
ENSHGLG00100012362PUF609185.413ENSMZEG00005018515puf60b10085.413Maylandia_zebra
ENSHGLG00100012362PUF609382.163ENSMZEG00005019425-9982.163Maylandia_zebra
ENSHGLG00100012362PUF609398.659ENSMGAG00000013070PUF609898.659Meleagris_gallopavo
ENSHGLG00100012362PUF607299.020ENSMAUG00000014267-10099.020Mesocricetus_auratus
ENSHGLG00100012362PUF6010075.725ENSMAUG00000018549-10075.949Mesocricetus_auratus
ENSHGLG00100012362PUF6010098.227ENSMICG00000012226PUF609999.425Microcebus_murinus
ENSHGLG00100012362PUF6010099.113ENSMOCG00000018780Puf6010099.113Microtus_ochrogaster
ENSHGLG00100012362PUF609185.797ENSMMOG00000004217puf60b10085.797Mola_mola
ENSHGLG00100012362PUF609375.591ENSMMOG00000018059-9976.941Mola_mola
ENSHGLG00100012362PUF6010096.892ENSMODG00000009161PUF6010096.892Monodelphis_domestica
ENSHGLG00100012362PUF609380.835ENSMALG00000000200-9979.434Monopterus_albus
ENSHGLG00100012362PUF609378.030ENSMALG00000006797puf60b9978.030Monopterus_albus
ENSHGLG00100012362PUF6010099.291MGP_CAROLIEiJ_G0019910Puf6010099.291Mus_caroli
ENSHGLG00100012362PUF6010099.291ENSMUSG00000002524Puf6010099.291Mus_musculus
ENSHGLG00100012362PUF6010099.291MGP_PahariEiJ_G0019920Puf6010099.291Mus_pahari
ENSHGLG00100012362PUF6010099.291MGP_SPRETEiJ_G0020812Puf6010099.291Mus_spretus
ENSHGLG00100012362PUF609998.022ENSMPUG00000008137PUF609798.022Mustela_putorius_furo
ENSHGLG00100012362PUF609997.662ENSMLUG00000000238-9897.662Myotis_lucifugus
ENSHGLG00100012362PUF609295.248ENSMLUG00000013032-9895.248Myotis_lucifugus
ENSHGLG00100012362PUF6010099.291ENSNGAG00000000712Puf6010099.419Nannospalax_galili
ENSHGLG00100012362PUF607782.143ENSNBRG00000013047puf60b9784.235Neolamprologus_brichardi
ENSHGLG00100012362PUF609382.353ENSNBRG00000017223-9982.319Neolamprologus_brichardi
ENSHGLG00100012362PUF6010098.227ENSNLEG00000002156PUF6010098.227Nomascus_leucogenys
ENSHGLG00100012362PUF606899.659ENSOPRG00000002147PUF607599.659Ochotona_princeps
ENSHGLG00100012362PUF608974.162ENSODEG00000015513-9971.375Octodon_degus
ENSHGLG00100012362PUF6074100.000ENSODEG00000014024-100100.000Octodon_degus
ENSHGLG00100012362PUF609384.848ENSONIG00000006247puf60b9984.848Oreochromis_niloticus
ENSHGLG00100012362PUF609382.386ENSONIG00000014030-9982.386Oreochromis_niloticus
ENSHGLG00100012362PUF609078.320ENSOANG00000006962PUF609978.320Ornithorhynchus_anatinus
ENSHGLG00100012362PUF609384.820ENSORLG00000012279puf60b10084.837Oryzias_latipes
ENSHGLG00100012362PUF609178.977ENSORLG00000028655-9979.087Oryzias_latipes
ENSHGLG00100012362PUF609278.868ENSORLG00020018144-9878.977Oryzias_latipes_hni
ENSHGLG00100012362PUF609384.820ENSORLG00020007333puf6010084.837Oryzias_latipes_hni
ENSHGLG00100012362PUF609383.932ENSORLG00015007718puf60b10084.704Oryzias_latipes_hsok
ENSHGLG00100012362PUF609279.127ENSORLG00015016833-9879.238Oryzias_latipes_hsok
ENSHGLG00100012362PUF609379.924ENSOMEG00000022185-9879.886Oryzias_melastigma
ENSHGLG00100012362PUF609382.342ENSOMEG00000001643puf60b9983.030Oryzias_melastigma
ENSHGLG00100012362PUF609997.691ENSOGAG00000006259PUF609997.691Otolemur_garnettii
ENSHGLG00100012362PUF609396.750ENSOARG00000016235PUF609996.750Ovis_aries
ENSHGLG00100012362PUF6010098.227ENSPPAG00000029933PUF6010098.227Pan_paniscus
ENSHGLG00100012362PUF6010099.113ENSPPRG00000003257PUF6010099.225Panthera_pardus
ENSHGLG00100012362PUF609997.593ENSPTIG00000009795PUF609996.743Panthera_tigris_altaica
ENSHGLG00100012362PUF609998.022ENSPTRG00000043963-9998.022Pan_troglodytes
ENSHGLG00100012362PUF6010098.050ENSPTRG00000020670PUF6010098.050Pan_troglodytes
ENSHGLG00100012362PUF6010098.227ENSPANG00000021936PUF6010098.227Papio_anubis
ENSHGLG00100012362PUF609387.452ENSPKIG00000012204puf60b10088.077Paramormyrops_kingsleyae
ENSHGLG00100012362PUF609883.734ENSPKIG00000004295puf60a9992.647Paramormyrops_kingsleyae
ENSHGLG00100012362PUF609398.470ENSPSIG00000004679PUF609998.470Pelodiscus_sinensis
ENSHGLG00100012362PUF609184.160ENSPMGG00000013444puf60b9984.160Periophthalmus_magnuspinnatus
ENSHGLG00100012362PUF6010099.113ENSPEMG00000008820Puf6010099.113Peromyscus_maniculatus_bairdii
ENSHGLG00100012362PUF609895.315ENSPCIG00000020270PUF609999.424Phascolarctos_cinereus
ENSHGLG00100012362PUF609384.250ENSPFOG00000019217puf60b10084.825Poecilia_formosa
ENSHGLG00100012362PUF609380.381ENSPFOG00000011118-9980.725Poecilia_formosa
ENSHGLG00100012362PUF609877.117ENSPLAG00000017025-9180.344Poecilia_latipinna
ENSHGLG00100012362PUF609184.837ENSPLAG00000010754puf60b10085.988Poecilia_latipinna
ENSHGLG00100012362PUF609877.117ENSPMEG00000009767-9180.725Poecilia_mexicana
ENSHGLG00100012362PUF609384.250ENSPMEG00000000838puf60b10085.988Poecilia_mexicana
ENSHGLG00100012362PUF609381.516ENSPREG00000005440puf60b10083.730Poecilia_reticulata
ENSHGLG00100012362PUF607497.842ENSPPYG00000018951-9597.842Pongo_abelii
ENSHGLG00100012362PUF607499.760ENSPCAG00000014837PUF6010099.760Procavia_capensis
ENSHGLG00100012362PUF6010098.759ENSPCOG00000027981PUF6010098.759Propithecus_coquereli
ENSHGLG00100012362PUF6091100.000ENSPVAG00000016167PUF6081100.000Pteropus_vampyrus
ENSHGLG00100012362PUF609382.163ENSPNYG00000004273-9982.163Pundamilia_nyererei
ENSHGLG00100012362PUF609185.413ENSPNYG00000002556puf60b10085.413Pundamilia_nyererei
ENSHGLG00100012362PUF609285.156ENSPNAG00000019909puf60a9984.961Pygocentrus_nattereri
ENSHGLG00100012362PUF609975.912ENSPNAG00000019415puf60b9077.120Pygocentrus_nattereri
ENSHGLG00100012362PUF6010099.269ENSRNOG00000009960Puf6010099.269Rattus_norvegicus
ENSHGLG00100012362PUF6010098.227ENSRBIG00000035274PUF6010098.227Rhinopithecus_bieti
ENSHGLG00100012362PUF6010098.227ENSRROG00000029360PUF6010098.227Rhinopithecus_roxellana
ENSHGLG00100012362PUF609894.384ENSSBOG00000027089PUF609897.893Saimiri_boliviensis_boliviensis
ENSHGLG00100012362PUF609096.850ENSSHAG00000006668PUF609596.850Sarcophilus_harrisii
ENSHGLG00100012362PUF609381.703ENSSFOG00015019371puf60a9887.324Scleropages_formosus
ENSHGLG00100012362PUF608886.235ENSSFOG00015019619puf60b9986.235Scleropages_formosus
ENSHGLG00100012362PUF606892.933ENSSMAG00000016381puf60b7392.933Scophthalmus_maximus
ENSHGLG00100012362PUF609280.344ENSSDUG00000007048-9880.725Seriola_dumerili
ENSHGLG00100012362PUF609383.643ENSSDUG00000009935puf60b9984.444Seriola_dumerili
ENSHGLG00100012362PUF609180.645ENSSLDG00000007366-9981.025Seriola_lalandi_dorsalis
ENSHGLG00100012362PUF609285.878ENSSLDG00000024011puf60b10083.925Seriola_lalandi_dorsalis
ENSHGLG00100012362PUF606086.431ENSSPUG00000013518PUF609485.757Sphenodon_punctatus
ENSHGLG00100012362PUF609382.810ENSSPAG00000012144puf60b10084.112Stegastes_partitus
ENSHGLG00100012362PUF609182.252ENSSPAG00000020285-10082.824Stegastes_partitus
ENSHGLG00100012362PUF609997.331ENSSSCG00000038800PUF609898.812Sus_scrofa
ENSHGLG00100012362PUF609395.402ENSTGUG00000012797-10095.402Taeniopygia_guttata
ENSHGLG00100012362PUF609180.160ENSTRUG00000008843-10080.561Takifugu_rubripes
ENSHGLG00100012362PUF609384.280ENSTRUG00000005420puf60b10082.617Takifugu_rubripes
ENSHGLG00100012362PUF609378.203ENSTNIG00000003069-10078.203Tetraodon_nigroviridis
ENSHGLG00100012362PUF609384.280ENSTNIG00000013675puf60b10084.091Tetraodon_nigroviridis
ENSHGLG00100012362PUF605796.284ENSTBEG00000002751-9996.271Tupaia_belangeri
ENSHGLG00100012362PUF607081.214ENSTBEG00000001899-10081.503Tupaia_belangeri
ENSHGLG00100012362PUF609198.837ENSTTRG00000017088PUF6010098.837Tursiops_truncatus
ENSHGLG00100012362PUF6010098.404ENSUAMG00000024917PUF6010098.404Ursus_americanus
ENSHGLG00100012362PUF609494.329ENSUMAG00000000272PUF609993.165Ursus_maritimus
ENSHGLG00100012362PUF609998.384ENSVVUG00000022527PUF6010099.612Vulpes_vulpes
ENSHGLG00100012362PUF609394.084ENSXETG00000012469puf609994.444Xenopus_tropicalis
ENSHGLG00100012362PUF609184.325ENSXCOG00000012355puf60b10085.516Xiphophorus_couchianus
ENSHGLG00100012362PUF609380.709ENSXMAG00000010507-9979.921Xiphophorus_maculatus
ENSHGLG00100012362PUF609384.250ENSXMAG00000001862puf60b10085.988Xiphophorus_maculatus

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