EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100012496 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 87160 bases
Position: chrJH169018.1:498889-586048
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100016943	Ago_hook	PF10427.9	1.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100017123	-	198	-	ENSHGLP00100016942	66 (aa)	-	-
ENSHGLT00100017124	-	5598	-	ENSHGLP00100016943	1866 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100012496's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100012496's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100012496	-	97	39.395	ENSHGLG00100012597	TNRC6C	98	39.445
ENSHGLG00100012496	-	97	36.392	ENSHGLG00100018108	TNRC6B	99	37.455

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100012496	-	100	93.445	ENSG00000090905	TNRC6A	99	93.498	Homo_sapiens
ENSHGLG00100012496	-	97	90.780	ENSAMEG00000009333	TNRC6A	99	90.780	Ailuropoda_melanoleuca
ENSHGLG00100012496	-	97	78.685	ENSAPLG00000009978	TNRC6A	99	78.685	Anas_platyrhynchos
ENSHGLG00100012496	-	99	52.606	ENSACAG00000011857	TNRC6A	99	54.658	Anolis_carolinensis
ENSHGLG00100012496	-	100	93.428	ENSANAG00000025252	TNRC6A	99	93.481	Aotus_nancymaae
ENSHGLG00100012496	-	91	56.208	ENSAMXG00000019919	tnrc6a	99	56.056	Astyanax_mexicanus
ENSHGLG00100012496	-	100	92.624	ENSBTAG00000017999	TNRC6A	99	92.671	Bos_taurus
ENSHGLG00100012496	-	100	91.210	ENSCJAG00000020677	TNRC6A	99	92.037	Callithrix_jacchus
ENSHGLG00100012496	-	100	90.579	ENSCAFG00000017531	TNRC6A	98	93.344	Canis_familiaris
ENSHGLG00100012496	-	97	94.295	ENSCAFG00020021160	TNRC6A	98	94.185	Canis_lupus_dingo
ENSHGLG00100012496	-	100	92.518	ENSCHIG00000019448	TNRC6A	99	92.255	Capra_hircus
ENSHGLG00100012496	-	100	93.221	ENSTSYG00000012711	TNRC6A	99	93.274	Carlito_syrichta
ENSHGLG00100012496	-	100	95.351	ENSCPOG00000036684	TNRC6A	99	95.351	Cavia_porcellus
ENSHGLG00100012496	-	100	93.487	ENSCCAG00000033664	TNRC6A	99	93.540	Cebus_capucinus
ENSHGLG00100012496	-	99	93.207	ENSCATG00000019284	TNRC6A	99	93.260	Cercocebus_atys
ENSHGLG00100012496	-	100	90.331	ENSCLAG00000010217	TNRC6A	99	90.541	Chinchilla_lanigera
ENSHGLG00100012496	-	100	91.249	ENSCSAG00000006561	TNRC6A	99	91.249	Chlorocebus_sabaeus
ENSHGLG00100012496	-	95	86.416	ENSCHOG00000009374	TNRC6A	94	86.416	Choloepus_hoffmanni
ENSHGLG00100012496	-	92	80.428	ENSCPBG00000001881	TNRC6A	99	80.486	Chrysemys_picta_bellii
ENSHGLG00100012496	-	100	93.642	ENSCANG00000041549	TNRC6A	99	93.747	Colobus_angolensis_palliatus
ENSHGLG00100012496	-	100	92.202	ENSCGRG00001015021	Tnrc6a	99	92.413	Cricetulus_griseus_chok1gshd
ENSHGLG00100012496	-	100	91.421	ENSCGRG00000013351	Tnrc6a	99	91.421	Cricetulus_griseus_crigri
ENSHGLG00100012496	-	92	56.331	ENSDARG00000079688	tnrc6a	99	56.363	Danio_rerio
ENSHGLG00100012496	-	97	89.295	ENSDNOG00000013989	TNRC6A	98	89.348	Dasypus_novemcinctus
ENSHGLG00100012496	-	97	82.381	ENSETEG00000014658	TNRC6A	98	82.434	Echinops_telfairi
ENSHGLG00100012496	-	100	92.989	ENSEASG00005017693	TNRC6A	99	93.147	Equus_asinus_asinus
ENSHGLG00100012496	-	100	90.647	ENSECAG00000025056	TNRC6A	98	93.482	Equus_caballus
ENSHGLG00100012496	-	97	85.060	ENSEEUG00000004530	TNRC6A	98	85.008	Erinaceus_europaeus
ENSHGLG00100012496	-	100	92.158	ENSFCAG00000025236	TNRC6A	99	92.263	Felis_catus
ENSHGLG00100012496	-	100	75.549	ENSFALG00000003757	TNRC6A	99	76.558	Ficedula_albicollis
ENSHGLG00100012496	-	92	80.809	ENSGALG00000006068	TNRC6A	99	81.272	Gallus_gallus
ENSHGLG00100012496	-	92	79.700	ENSGAGG00000023209	TNRC6A	99	80.046	Gopherus_agassizii
ENSHGLG00100012496	-	99	93.340	ENSGGOG00000005137	TNRC6A	99	93.393	Gorilla_gorilla
ENSHGLG00100012496	-	99	98.722	ENSHGLG00000012474	-	99	98.722	Heterocephalus_glaber_female
ENSHGLG00100012496	-	100	90.812	ENSSTOG00000023394	TNRC6A	98	90.812	Ictidomys_tridecemlineatus
ENSHGLG00100012496	-	97	67.158	ENSLACG00000006277	TNRC6A	99	67.737	Latimeria_chalumnae
ENSHGLG00100012496	-	99	80.134	ENSLOCG00000005517	tnrc6a	92	80.134	Lepisosteus_oculatus
ENSHGLG00100012496	-	97	92.597	ENSLAFG00000004209	TNRC6A	99	92.760	Loxodonta_africana
ENSHGLG00100012496	-	97	90.399	ENSMFAG00000003824	TNRC6A	98	90.399	Macaca_fascicularis
ENSHGLG00100012496	-	100	93.537	ENSMMUG00000020428	TNRC6A	99	93.589	Macaca_mulatta
ENSHGLG00100012496	-	100	93.048	ENSMNEG00000034854	TNRC6A	99	93.100	Macaca_nemestrina
ENSHGLG00100012496	-	97	90.215	ENSMLEG00000042737	TNRC6A	96	90.267	Mandrillus_leucophaeus
ENSHGLG00100012496	-	100	75.456	ENSMGAG00000006455	TNRC6A	99	76.116	Meleagris_gallopavo
ENSHGLG00100012496	-	100	92.402	ENSMAUG00000012750	Tnrc6a	99	92.561	Mesocricetus_auratus
ENSHGLG00100012496	-	100	94.022	ENSMICG00000030685	TNRC6A	99	94.022	Microcebus_murinus
ENSHGLG00100012496	-	100	92.340	ENSMOCG00000000152	Tnrc6a	99	92.287	Microtus_ochrogaster
ENSHGLG00100012496	-	100	77.979	ENSMODG00000016348	TNRC6A	98	78.812	Monodelphis_domestica
ENSHGLG00100012496	-	99	91.089	MGP_CAROLIEiJ_G0030425	Tnrc6a	99	90.982	Mus_caroli
ENSHGLG00100012496	-	100	91.389	ENSMUSG00000052707	Tnrc6a	99	91.337	Mus_musculus
ENSHGLG00100012496	-	99	91.378	MGP_PahariEiJ_G0013635	Tnrc6a	99	91.272	Mus_pahari
ENSHGLG00100012496	-	100	89.124	MGP_SPRETEiJ_G0031539	Tnrc6a	99	89.021	Mus_spretus
ENSHGLG00100012496	-	97	83.452	ENSMPUG00000012324	TNRC6A	99	83.015	Mustela_putorius_furo
ENSHGLG00100012496	-	97	88.347	ENSMLUG00000002701	TNRC6A	99	88.400	Myotis_lucifugus
ENSHGLG00100012496	-	100	93.042	ENSNGAG00000020702	Tnrc6a	99	93.094	Nannospalax_galili
ENSHGLG00100012496	-	97	93.845	ENSNLEG00000011851	TNRC6A	98	93.845	Nomascus_leucogenys
ENSHGLG00100012496	-	76	80.868	ENSMEUG00000015959	-	77	80.979	Notamacropus_eugenii
ENSHGLG00100012496	-	95	89.434	ENSOPRG00000005819	TNRC6A	96	90.152	Ochotona_princeps
ENSHGLG00100012496	-	99	89.631	ENSODEG00000012802	TNRC6A	99	89.685	Octodon_degus
ENSHGLG00100012496	-	88	78.733	ENSOANG00000007672	TNRC6A	99	78.701	Ornithorhynchus_anatinus
ENSHGLG00100012496	-	97	89.824	ENSOCUG00000004325	TNRC6A	99	89.824	Oryctolagus_cuniculus
ENSHGLG00100012496	-	99	91.257	ENSOGAG00000006666	TNRC6A	99	91.309	Otolemur_garnettii
ENSHGLG00100012496	-	99	89.273	ENSOARG00000017950	TNRC6A	98	93.695	Ovis_aries
ENSHGLG00100012496	-	100	93.149	ENSPPAG00000028379	TNRC6A	99	93.201	Pan_paniscus
ENSHGLG00100012496	-	100	92.158	ENSPPRG00000005861	TNRC6A	99	92.263	Panthera_pardus
ENSHGLG00100012496	-	100	91.562	ENSPTIG00000006346	TNRC6A	99	91.352	Panthera_tigris_altaica
ENSHGLG00100012496	-	99	89.574	ENSPTRG00000007898	TNRC6A	99	90.715	Pan_troglodytes
ENSHGLG00100012496	-	100	90.995	ENSPANG00000018523	TNRC6A	99	91.047	Papio_anubis
ENSHGLG00100012496	-	87	76.786	ENSPKIG00000012859	tnrc6a	98	76.786	Paramormyrops_kingsleyae
ENSHGLG00100012496	-	78	75.542	ENSPSIG00000003965	TNRC6A	99	75.610	Pelodiscus_sinensis
ENSHGLG00100012496	-	100	92.344	ENSPEMG00000016318	Tnrc6a	99	92.291	Peromyscus_maniculatus_bairdii
ENSHGLG00100012496	-	97	82.079	ENSPCIG00000012106	TNRC6A	99	82.296	Phascolarctos_cinereus
ENSHGLG00100012496	-	100	90.449	ENSPPYG00000007202	TNRC6A	99	90.449	Pongo_abelii
ENSHGLG00100012496	-	95	98.925	ENSPCAG00000008260	TNRC6A	94	98.925	Procavia_capensis
ENSHGLG00100012496	-	100	91.501	ENSPCOG00000010134	TNRC6A	99	91.501	Propithecus_coquereli
ENSHGLG00100012496	-	90	68.164	ENSPVAG00000012066	TNRC6A	99	68.682	Pteropus_vampyrus
ENSHGLG00100012496	-	100	90.738	ENSRNOG00000024737	Tnrc6a	99	90.633	Rattus_norvegicus
ENSHGLG00100012496	-	97	93.936	ENSRBIG00000014222	TNRC6A	98	93.990	Rhinopithecus_bieti
ENSHGLG00100012496	-	100	91.478	ENSRROG00000032360	TNRC6A	99	91.478	Rhinopithecus_roxellana
ENSHGLG00100012496	-	97	92.271	ENSSBOG00000036197	TNRC6A	99	92.676	Saimiri_boliviensis_boliviensis
ENSHGLG00100012496	-	92	82.800	ENSSHAG00000008811	TNRC6A	99	83.200	Sarcophilus_harrisii
ENSHGLG00100012496	-	92	57.475	ENSSFOG00015008920	tnrc6a	99	57.549	Scleropages_formosus
ENSHGLG00100012496	-	71	75.601	ENSSARG00000002479	TNRC6A	88	76.322	Sorex_araneus
ENSHGLG00100012496	-	91	77.194	ENSSPUG00000010525	TNRC6A	99	77.252	Sphenodon_punctatus
ENSHGLG00100012496	-	100	92.513	ENSSSCG00000038870	TNRC6A	99	95.316	Sus_scrofa
ENSHGLG00100012496	-	100	78.922	ENSTGUG00000006142	TNRC6A	99	79.609	Taeniopygia_guttata
ENSHGLG00100012496	-	97	89.258	ENSTBEG00000014965	TNRC6A	99	89.205	Tupaia_belangeri
ENSHGLG00100012496	-	93	89.491	ENSTTRG00000002008	TNRC6A	92	89.491	Tursiops_truncatus
ENSHGLG00100012496	-	79	94.430	ENSUAMG00000006656	-	93	94.430	Ursus_americanus
ENSHGLG00100012496	-	98	90.299	ENSUMAG00000008274	TNRC6A	99	95.012	Ursus_maritimus
ENSHGLG00100012496	-	55	84.761	ENSVPAG00000010764	-	57	84.761	Vicugna_pacos
ENSHGLG00100012496	-	99	92.800	ENSVVUG00000005380	TNRC6A	98	92.853	Vulpes_vulpes
ENSHGLG00100012496	-	95	62.681	ENSXETG00000030437	TNRC6A	99	63.087	Xenopus_tropicalis