EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100012597 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 85071 bases
Position: chrJH167152.1:260014-345084
Accession: 29318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100017086	Ago_hook	PF10427.9	1.1e-21	1	1
ENSHGLP00100017086	RRM_1	PF00076.22	0.00025	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100017269	TNRC6C-201	5682	-	ENSHGLP00100017086	1894 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100012597's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100012597's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100012597	TNRC6C	98	35.686	ENSHGLG00100018108	TNRC6B	97	34.633
ENSHGLG00100012597	TNRC6C	98	39.445	ENSHGLG00100012496	-	97	39.395

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100012597	TNRC6C	99	89.854	ENSG00000078687	TNRC6C	100	91.461	Homo_sapiens
ENSHGLG00100012597	TNRC6C	71	54.585	ENSAPOG00000019749	tnrc6c1	98	50.189	Acanthochromis_polyacanthus
ENSHGLG00100012597	TNRC6C	93	85.558	ENSAMEG00000013756	TNRC6C	99	85.449	Ailuropoda_melanoleuca
ENSHGLG00100012597	TNRC6C	93	46.805	ENSACIG00000008075	tnrc6c1	98	51.710	Amphilophus_citrinellus
ENSHGLG00100012597	TNRC6C	67	68.871	ENSAOCG00000023968	tnrc6c1	99	48.948	Amphiprion_ocellaris
ENSHGLG00100012597	TNRC6C	71	54.397	ENSAPEG00000009020	tnrc6c1	99	49.601	Amphiprion_percula
ENSHGLG00100012597	TNRC6C	99	83.204	ENSAPLG00000005456	TNRC6C	100	82.550	Anas_platyrhynchos
ENSHGLG00100012597	TNRC6C	99	82.990	ENSACAG00000016198	TNRC6C	98	83.021	Anolis_carolinensis
ENSHGLG00100012597	TNRC6C	99	89.537	ENSANAG00000021554	TNRC6C	100	91.338	Aotus_nancymaae
ENSHGLG00100012597	TNRC6C	90	50.543	ENSACLG00000000424	tnrc6c1	98	51.256	Astatotilapia_calliptera
ENSHGLG00100012597	TNRC6C	99	85.314	ENSBTAG00000018658	TNRC6C	100	87.390	Bos_taurus
ENSHGLG00100012597	TNRC6C	99	89.745	ENSCJAG00000019431	TNRC6C	100	91.279	Callithrix_jacchus
ENSHGLG00100012597	TNRC6C	99	87.669	ENSCAFG00000005224	TNRC6C	99	87.513	Canis_familiaris
ENSHGLG00100012597	TNRC6C	99	89.936	ENSCAFG00020006661	TNRC6C	100	88.850	Canis_lupus_dingo
ENSHGLG00100012597	TNRC6C	99	86.787	ENSCHIG00000026004	TNRC6C	100	86.557	Capra_hircus
ENSHGLG00100012597	TNRC6C	89	90.704	ENSTSYG00000005403	TNRC6C	100	90.704	Carlito_syrichta
ENSHGLG00100012597	TNRC6C	98	88.289	ENSCAPG00000007307	TNRC6C	99	88.128	Cavia_aperea
ENSHGLG00100012597	TNRC6C	99	92.663	ENSCPOG00000000467	TNRC6C	100	92.943	Cavia_porcellus
ENSHGLG00100012597	TNRC6C	99	90.109	ENSCCAG00000030524	TNRC6C	100	91.750	Cebus_capucinus
ENSHGLG00100012597	TNRC6C	99	90.005	ENSCATG00000033135	TNRC6C	100	91.691	Cercocebus_atys
ENSHGLG00100012597	TNRC6C	99	95.008	ENSCLAG00000011139	TNRC6C	99	94.949	Chinchilla_lanigera
ENSHGLG00100012597	TNRC6C	99	89.537	ENSCSAG00000005167	TNRC6C	99	89.328	Chlorocebus_sabaeus
ENSHGLG00100012597	TNRC6C	70	89.623	ENSCHOG00000000088	TNRC6C	75	88.413	Choloepus_hoffmanni
ENSHGLG00100012597	TNRC6C	93	86.436	ENSCPBG00000027960	TNRC6C	100	86.623	Chrysemys_picta_bellii
ENSHGLG00100012597	TNRC6C	99	89.537	ENSCANG00000041771	TNRC6C	100	91.102	Colobus_angolensis_palliatus
ENSHGLG00100012597	TNRC6C	99	89.877	ENSCGRG00001022686	Tnrc6c	100	89.020	Cricetulus_griseus_chok1gshd
ENSHGLG00100012597	TNRC6C	99	89.877	ENSCGRG00000018041	Tnrc6c	100	89.020	Cricetulus_griseus_crigri
ENSHGLG00100012597	TNRC6C	62	38.828	ENSCSEG00000012744	tnrc6c1	98	45.078	Cynoglossus_semilaevis
ENSHGLG00100012597	TNRC6C	99	51.857	ENSDARG00000076847	tnrc6c1	99	52.838	Danio_rerio
ENSHGLG00100012597	TNRC6C	99	85.774	ENSDNOG00000003247	TNRC6C	99	85.409	Dasypus_novemcinctus
ENSHGLG00100012597	TNRC6C	98	86.354	ENSDORG00000004558	Tnrc6c	100	87.375	Dipodomys_ordii
ENSHGLG00100012597	TNRC6C	82	82.022	ENSETEG00000005527	TNRC6C	90	81.504	Echinops_telfairi
ENSHGLG00100012597	TNRC6C	89	90.496	ENSEASG00005004799	TNRC6C	100	90.201	Equus_asinus_asinus
ENSHGLG00100012597	TNRC6C	99	89.824	ENSECAG00000012486	TNRC6C	99	89.558	Equus_caballus
ENSHGLG00100012597	TNRC6C	88	89.002	ENSEEUG00000010008	TNRC6C	96	89.002	Erinaceus_europaeus
ENSHGLG00100012597	TNRC6C	99	85.655	ENSFCAG00000028358	TNRC6C	100	87.824	Felis_catus
ENSHGLG00100012597	TNRC6C	89	82.938	ENSFALG00000000848	TNRC6C	100	82.712	Ficedula_albicollis
ENSHGLG00100012597	TNRC6C	92	95.181	ENSFDAG00000010368	TNRC6C	100	95.525	Fukomys_damarensis
ENSHGLG00100012597	TNRC6C	93	50.169	ENSFHEG00000002936	tnrc6c1	99	46.202	Fundulus_heteroclitus
ENSHGLG00100012597	TNRC6C	93	85.343	ENSGALG00000001725	TNRC6C	100	87.360	Gallus_gallus
ENSHGLG00100012597	TNRC6C	99	47.638	ENSGAFG00000019019	tnrc6c1	100	49.116	Gambusia_affinis
ENSHGLG00100012597	TNRC6C	93	85.649	ENSGAGG00000022043	TNRC6C	99	85.513	Gopherus_agassizii
ENSHGLG00100012597	TNRC6C	99	89.334	ENSGGOG00000011304	TNRC6C	100	90.695	Gorilla_gorilla
ENSHGLG00100012597	TNRC6C	95	50.644	ENSHBUG00000010846	tnrc6c1	98	51.472	Haplochromis_burtoni
ENSHGLG00100012597	TNRC6C	100	99.315	ENSHGLG00000004809	TNRC6C	100	99.315	Heterocephalus_glaber_female
ENSHGLG00100012597	TNRC6C	99	52.266	ENSIPUG00000000818	tnrc6c1	98	52.878	Ictalurus_punctatus
ENSHGLG00100012597	TNRC6C	99	91.136	ENSSTOG00000009101	TNRC6C	100	91.008	Ictidomys_tridecemlineatus
ENSHGLG00100012597	TNRC6C	99	88.907	ENSJJAG00000017055	Tnrc6c	99	88.747	Jaculus_jaculus
ENSHGLG00100012597	TNRC6C	71	53.648	ENSKMAG00000021023	tnrc6c1	100	49.771	Kryptolebias_marmoratus
ENSHGLG00100012597	TNRC6C	92	74.659	ENSLACG00000015283	TNRC6C	100	74.716	Latimeria_chalumnae
ENSHGLG00100012597	TNRC6C	100	56.312	ENSLOCG00000013377	tnrc6c1	99	56.216	Lepisosteus_oculatus
ENSHGLG00100012597	TNRC6C	99	89.862	ENSLAFG00000011122	TNRC6C	99	89.527	Loxodonta_africana
ENSHGLG00100012597	TNRC6C	99	89.984	ENSMFAG00000043943	TNRC6C	100	91.691	Macaca_fascicularis
ENSHGLG00100012597	TNRC6C	99	89.652	ENSMMUG00000011924	TNRC6C	100	91.691	Macaca_mulatta
ENSHGLG00100012597	TNRC6C	99	90.005	ENSMNEG00000030405	TNRC6C	100	91.632	Macaca_nemestrina
ENSHGLG00100012597	TNRC6C	99	90.109	ENSMLEG00000033436	TNRC6C	100	91.750	Mandrillus_leucophaeus
ENSHGLG00100012597	TNRC6C	95	53.084	ENSMAMG00000023613	tnrc6c1	100	49.721	Mastacembelus_armatus
ENSHGLG00100012597	TNRC6C	95	50.508	ENSMZEG00005010920	tnrc6c1	98	51.256	Maylandia_zebra
ENSHGLG00100012597	TNRC6C	99	77.882	ENSMGAG00000003906	TNRC6C	100	77.726	Meleagris_gallopavo
ENSHGLG00100012597	TNRC6C	89	90.389	ENSMAUG00000021618	Tnrc6c	100	90.673	Mesocricetus_auratus
ENSHGLG00100012597	TNRC6C	99	90.265	ENSMICG00000003952	TNRC6C	100	91.986	Microcebus_murinus
ENSHGLG00100012597	TNRC6C	99	90.817	ENSMOCG00000015879	Tnrc6c	100	91.112	Microtus_ochrogaster
ENSHGLG00100012597	TNRC6C	70	55.118	ENSMMOG00000005203	tnrc6c1	100	50.169	Mola_mola
ENSHGLG00100012597	TNRC6C	99	85.722	ENSMODG00000001785	TNRC6C	99	85.191	Monodelphis_domestica
ENSHGLG00100012597	TNRC6C	99	90.489	MGP_CAROLIEiJ_G0017465	Tnrc6c	100	90.482	Mus_caroli
ENSHGLG00100012597	TNRC6C	99	90.383	ENSMUSG00000025571	Tnrc6c	100	90.424	Mus_musculus
ENSHGLG00100012597	TNRC6C	99	90.542	MGP_PahariEiJ_G0018593	Tnrc6c	100	90.596	Mus_pahari
ENSHGLG00100012597	TNRC6C	99	90.436	MGP_SPRETEiJ_G0018309	Tnrc6c	100	90.482	Mus_spretus
ENSHGLG00100012597	TNRC6C	99	85.135	ENSMPUG00000013348	TNRC6C	98	85.432	Mustela_putorius_furo
ENSHGLG00100012597	TNRC6C	99	81.485	ENSMLUG00000014431	TNRC6C	98	81.156	Myotis_lucifugus
ENSHGLG00100012597	TNRC6C	99	91.015	ENSNGAG00000012203	Tnrc6c	99	90.909	Nannospalax_galili
ENSHGLG00100012597	TNRC6C	90	51.509	ENSNBRG00000005344	tnrc6c1	98	52.296	Neolamprologus_brichardi
ENSHGLG00100012597	TNRC6C	98	87.774	ENSNLEG00000000047	TNRC6C	99	87.409	Nomascus_leucogenys
ENSHGLG00100012597	TNRC6C	89	79.789	ENSMEUG00000005104	TNRC6C	100	79.496	Notamacropus_eugenii
ENSHGLG00100012597	TNRC6C	89	94.802	ENSODEG00000012499	TNRC6C	100	94.920	Octodon_degus
ENSHGLG00100012597	TNRC6C	87	53.140	ENSONIG00000002210	tnrc6c1	99	54.252	Oreochromis_niloticus
ENSHGLG00100012597	TNRC6C	99	62.172	ENSOANG00000009758	-	100	62.087	Ornithorhynchus_anatinus
ENSHGLG00100012597	TNRC6C	85	78.907	ENSOCUG00000006122	TNRC6C	96	76.200	Oryctolagus_cuniculus
ENSHGLG00100012597	TNRC6C	93	47.165	ENSORLG00000009837	tnrc6c1	100	65.428	Oryzias_latipes
ENSHGLG00100012597	TNRC6C	93	46.194	ENSORLG00020016510	tnrc6c1	100	48.222	Oryzias_latipes_hni
ENSHGLG00100012597	TNRC6C	76	42.222	ENSORLG00015000171	tnrc6c1	98	43.478	Oryzias_latipes_hsok
ENSHGLG00100012597	TNRC6C	93	47.349	ENSOMEG00000000357	tnrc6c1	99	48.097	Oryzias_melastigma
ENSHGLG00100012597	TNRC6C	89	89.030	ENSOGAG00000007197	TNRC6C	100	89.030	Otolemur_garnettii
ENSHGLG00100012597	TNRC6C	95	82.710	ENSOARG00000006041	TNRC6C	97	82.924	Ovis_aries
ENSHGLG00100012597	TNRC6C	99	89.823	ENSPPAG00000027160	TNRC6C	100	91.397	Pan_paniscus
ENSHGLG00100012597	TNRC6C	99	85.759	ENSPPRG00000018881	TNRC6C	100	87.941	Panthera_pardus
ENSHGLG00100012597	TNRC6C	90	76.812	ENSPTIG00000008791	TNRC6C	90	82.480	Panthera_tigris_altaica
ENSHGLG00100012597	TNRC6C	99	89.901	ENSPTRG00000009699	TNRC6C	100	91.397	Pan_troglodytes
ENSHGLG00100012597	TNRC6C	99	90.057	ENSPANG00000019994	TNRC6C	100	91.854	Papio_anubis
ENSHGLG00100012597	TNRC6C	52	61.174	ENSPKIG00000005428	tnrc6c1	100	50.000	Paramormyrops_kingsleyae
ENSHGLG00100012597	TNRC6C	92	84.897	ENSPSIG00000018069	TNRC6C	100	84.211	Pelodiscus_sinensis
ENSHGLG00100012597	TNRC6C	58	54.783	ENSPMGG00000022911	tnrc6c1	97	61.134	Periophthalmus_magnuspinnatus
ENSHGLG00100012597	TNRC6C	99	90.552	ENSPEMG00000009785	Tnrc6c	99	90.861	Peromyscus_maniculatus_bairdii
ENSHGLG00100012597	TNRC6C	51	85.082	ENSPCIG00000017421	-	99	85.082	Phascolarctos_cinereus
ENSHGLG00100012597	TNRC6C	97	47.783	ENSPFOG00000012560	tnrc6c1	97	53.367	Poecilia_formosa
ENSHGLG00100012597	TNRC6C	89	48.671	ENSPLAG00000021055	tnrc6c1	100	49.310	Poecilia_latipinna
ENSHGLG00100012597	TNRC6C	99	89.912	ENSPPYG00000008679	TNRC6C	98	89.693	Pongo_abelii
ENSHGLG00100012597	TNRC6C	86	90.995	ENSPCAG00000012510	TNRC6C	94	89.336	Procavia_capensis
ENSHGLG00100012597	TNRC6C	89	92.339	ENSPCOG00000021451	TNRC6C	100	92.280	Propithecus_coquereli
ENSHGLG00100012597	TNRC6C	88	88.111	ENSPVAG00000002008	TNRC6C	95	88.266	Pteropus_vampyrus
ENSHGLG00100012597	TNRC6C	90	50.068	ENSPNYG00000014477	tnrc6c1	99	51.617	Pundamilia_nyererei
ENSHGLG00100012597	TNRC6C	89	90.153	ENSRNOG00000022395	Tnrc6c	100	90.153	Rattus_norvegicus
ENSHGLG00100012597	TNRC6C	99	89.875	ENSRBIG00000027777	TNRC6C	100	91.514	Rhinopithecus_bieti
ENSHGLG00100012597	TNRC6C	99	89.849	ENSRROG00000042912	TNRC6C	100	91.456	Rhinopithecus_roxellana
ENSHGLG00100012597	TNRC6C	99	89.864	ENSSBOG00000023981	TNRC6C	100	89.267	Saimiri_boliviensis_boliviensis
ENSHGLG00100012597	TNRC6C	61	55.839	ENSSFOG00015004735	-	99	61.640	Scleropages_formosus
ENSHGLG00100012597	TNRC6C	93	47.893	ENSSMAG00000012761	tnrc6c1	99	50.228	Scophthalmus_maximus
ENSHGLG00100012597	TNRC6C	71	54.795	ENSSDUG00000002366	tnrc6c1	99	50.456	Seriola_dumerili
ENSHGLG00100012597	TNRC6C	71	53.361	ENSSLDG00000025613	tnrc6c1	100	49.752	Seriola_lalandi_dorsalis
ENSHGLG00100012597	TNRC6C	84	88.362	ENSSARG00000006816	TNRC6C	91	88.106	Sorex_araneus
ENSHGLG00100012597	TNRC6C	79	84.434	ENSSPUG00000007341	TNRC6C	98	83.530	Sphenodon_punctatus
ENSHGLG00100012597	TNRC6C	70	53.173	ENSSPAG00000014977	tnrc6c1	98	48.624	Stegastes_partitus
ENSHGLG00100012597	TNRC6C	89	85.360	ENSSSCG00000034373	TNRC6C	100	86.179	Sus_scrofa
ENSHGLG00100012597	TNRC6C	92	86.613	ENSTGUG00000007733	TNRC6C	100	86.327	Taeniopygia_guttata
ENSHGLG00100012597	TNRC6C	70	53.319	ENSTRUG00000011685	tnrc6c1	100	48.460	Takifugu_rubripes
ENSHGLG00100012597	TNRC6C	88	54.206	ENSTNIG00000005273	tnrc6c1	100	58.252	Tetraodon_nigroviridis
ENSHGLG00100012597	TNRC6C	57	89.453	ENSTBEG00000005046	TNRC6C	95	89.453	Tupaia_belangeri
ENSHGLG00100012597	TNRC6C	92	89.416	ENSTTRG00000010828	TNRC6C	99	89.016	Tursiops_truncatus
ENSHGLG00100012597	TNRC6C	99	87.513	ENSUMAG00000013614	TNRC6C	99	87.527	Ursus_maritimus
ENSHGLG00100012597	TNRC6C	89	90.501	ENSVVUG00000015268	TNRC6C	100	90.265	Vulpes_vulpes
ENSHGLG00100012597	TNRC6C	89	74.254	ENSXETG00000019470	tnrc6c	100	73.903	Xenopus_tropicalis
ENSHGLG00100012597	TNRC6C	99	47.535	ENSXMAG00000025971	tnrc6c1	99	50.449	Xiphophorus_maculatus