EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100012752 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 37027 bases
Position: chrJH173446.1:94471-131497
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100017291	DND1_DSRM	PF14709.7	5.1e-29	1	1
ENSHGLP00100017292	DND1_DSRM	PF14709.7	5.9e-29	1	1
ENSHGLP00100017290	DND1_DSRM	PF14709.7	6.6e-29	1	1
ENSHGLP00100017291	RRM_1	PF00076.22	7.8e-33	1	3
ENSHGLP00100017291	RRM_1	PF00076.22	7.8e-33	2	3
ENSHGLP00100017291	RRM_1	PF00076.22	7.8e-33	3	3
ENSHGLP00100017292	RRM_1	PF00076.22	8.9e-33	1	3
ENSHGLP00100017292	RRM_1	PF00076.22	8.9e-33	2	3
ENSHGLP00100017292	RRM_1	PF00076.22	8.9e-33	3	3
ENSHGLP00100017290	RRM_1	PF00076.22	1.3e-32	1	3
ENSHGLP00100017290	RRM_1	PF00076.22	1.3e-32	2	3
ENSHGLP00100017290	RRM_1	PF00076.22	1.3e-32	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100017476	-	1452	-	ENSHGLP00100017292	484 (aa)	-	-
ENSHGLT00100017475	-	1410	-	ENSHGLP00100017291	469 (aa)	-	-
ENSHGLT00100017474	-	1587	-	ENSHGLP00100017290	528 (aa)	-	G5C5K3

Gene Model

Click here to download ENSHGLG00100012752's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100012752's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100012752	-	64	70.667	ENSHGLG00100014028	-	84	75.000
ENSHGLG00100012752	-	58	30.286	ENSHGLG00100001107	TIA1	71	30.286
ENSHGLG00100012752	-	64	66.000	ENSHGLG00100003071	-	53	66.000
ENSHGLG00100012752	-	63	55.034	ENSHGLG00100009598	-	56	55.034
ENSHGLG00100012752	-	63	54.000	ENSHGLG00100013302	SYNCRIP	53	53.000
ENSHGLG00100012752	-	99	78.801	ENSHGLG00100018987	-	99	79.615
ENSHGLG00100012752	-	99	67.197	ENSHGLG00100000518	A1CF	93	67.524
ENSHGLG00100012752	-	60	50.352	ENSHGLG00100000255	-	50	48.322
ENSHGLG00100012752	-	94	81.136	ENSHGLG00100004977	-	97	73.592

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100012752	-	100	95.106	ENSG00000151962	RBM46	100	96.992	Homo_sapiens
ENSHGLG00100012752	-	97	65.161	ENSAPOG00000009209	rbm46	91	64.681	Acanthochromis_polyacanthus
ENSHGLG00100012752	-	99	94.861	ENSAMEG00000013290	RBM46	100	93.433	Ailuropoda_melanoleuca
ENSHGLG00100012752	-	96	60.304	ENSACIG00000014500	rbm46	88	60.521	Amphilophus_citrinellus
ENSHGLG00100012752	-	95	65.843	ENSAOCG00000001892	-	99	59.328	Amphiprion_ocellaris
ENSHGLG00100012752	-	95	65.843	ENSAPEG00000017762	rbm46	97	65.843	Amphiprion_percula
ENSHGLG00100012752	-	97	63.203	ENSATEG00000010775	rbm46	98	58.779	Anabas_testudineus
ENSHGLG00100012752	-	99	85.867	ENSAPLG00000005116	RBM46	100	85.867	Anas_platyrhynchos
ENSHGLG00100012752	-	99	88.412	ENSACAG00000015599	RBM46	100	86.278	Anolis_carolinensis
ENSHGLG00100012752	-	100	93.830	ENSANAG00000029193	RBM46	100	93.830	Aotus_nancymaae
ENSHGLG00100012752	-	95	64.317	ENSACLG00000016153	rbm46	94	59.158	Astatotilapia_calliptera
ENSHGLG00100012752	-	96	65.333	ENSAMXG00000009397	rbm46	98	65.333	Astyanax_mexicanus
ENSHGLG00100012752	-	95	62.174	ENSAMXG00000020892	-	99	59.546	Astyanax_mexicanus
ENSHGLG00100012752	-	100	94.227	ENSBTAG00000001696	RBM46	100	94.227	Bos_taurus
ENSHGLG00100012752	-	100	94.255	ENSCJAG00000001768	RBM46	100	94.255	Callithrix_jacchus
ENSHGLG00100012752	-	100	95.052	ENSCAFG00000008473	RBM46	100	95.052	Canis_familiaris
ENSHGLG00100012752	-	99	95.075	ENSCAFG00020002468	RBM46	100	93.621	Canis_lupus_dingo
ENSHGLG00100012752	-	100	94.227	ENSCHIG00000000502	RBM46	100	94.227	Capra_hircus
ENSHGLG00100012752	-	100	94.021	ENSTSYG00000010435	RBM46	100	94.021	Carlito_syrichta
ENSHGLG00100012752	-	79	89.189	ENSCAPG00000011841	-	99	89.431	Cavia_aperea
ENSHGLG00100012752	-	100	96.289	ENSCAPG00000011928	-	100	96.289	Cavia_aperea
ENSHGLG00100012752	-	99	91.379	ENSCPOG00000020396	-	95	91.579	Cavia_porcellus
ENSHGLG00100012752	-	99	92.505	ENSCPOG00000019272	-	100	91.078	Cavia_porcellus
ENSHGLG00100012752	-	100	96.289	ENSCPOG00000010284	-	100	96.289	Cavia_porcellus
ENSHGLG00100012752	-	100	95.106	ENSCCAG00000027619	-	100	95.106	Cebus_capucinus
ENSHGLG00100012752	-	99	78.870	ENSCCAG00000001323	-	99	78.526	Cebus_capucinus
ENSHGLG00100012752	-	100	94.468	ENSCATG00000040148	RBM46	100	94.468	Cercocebus_atys
ENSHGLG00100012752	-	100	96.383	ENSCLAG00000005846	-	100	96.383	Chinchilla_lanigera
ENSHGLG00100012752	-	99	92.505	ENSCLAG00000011886	-	97	89.784	Chinchilla_lanigera
ENSHGLG00100012752	-	99	94.647	ENSCSAG00000003263	RBM46	100	93.621	Chlorocebus_sabaeus
ENSHGLG00100012752	-	99	94.433	ENSCHOG00000003429	RBM46	100	92.308	Choloepus_hoffmanni
ENSHGLG00100012752	-	95	90.562	ENSCPBG00000009314	RBM46	97	90.562	Chrysemys_picta_bellii
ENSHGLG00100012752	-	100	94.639	ENSCANG00000039065	RBM46	100	94.639	Colobus_angolensis_palliatus
ENSHGLG00100012752	-	100	94.227	ENSCGRG00001016714	Rbm46	100	94.227	Cricetulus_griseus_chok1gshd
ENSHGLG00100012752	-	100	94.227	ENSCGRG00000011738	Rbm46	100	94.227	Cricetulus_griseus_crigri
ENSHGLG00100012752	-	95	58.166	ENSCSEG00000005530	rbm46	96	58.166	Cynoglossus_semilaevis
ENSHGLG00100012752	-	98	62.121	ENSCVAG00000021013	rbm46	97	61.603	Cyprinodon_variegatus
ENSHGLG00100012752	-	96	67.031	ENSDARG00000079452	rbm46	99	63.776	Danio_rerio
ENSHGLG00100012752	-	99	94.647	ENSDNOG00000016195	RBM46	100	93.246	Dasypus_novemcinctus
ENSHGLG00100012752	-	100	94.468	ENSDORG00000006405	Rbm46	100	94.468	Dipodomys_ordii
ENSHGLG00100012752	-	99	92.934	ENSETEG00000014902	RBM46	100	88.555	Echinops_telfairi
ENSHGLG00100012752	-	99	93.362	ENSEASG00005015821	RBM46	100	91.932	Equus_asinus_asinus
ENSHGLG00100012752	-	100	93.402	ENSECAG00000007649	RBM46	100	93.402	Equus_caballus
ENSHGLG00100012752	-	99	91.649	ENSEEUG00000011824	RBM46	100	90.432	Erinaceus_europaeus
ENSHGLG00100012752	-	78	71.038	ENSELUG00000008166	rbm46	98	67.692	Esox_lucius
ENSHGLG00100012752	-	100	95.052	ENSFCAG00000029812	RBM46	100	95.052	Felis_catus
ENSHGLG00100012752	-	99	84.435	ENSFALG00000013157	RBM46	95	82.402	Ficedula_albicollis
ENSHGLG00100012752	-	100	92.495	ENSFDAG00000019281	-	100	92.495	Fukomys_damarensis
ENSHGLG00100012752	-	99	89.722	ENSFDAG00000006445	-	95	89.540	Fukomys_damarensis
ENSHGLG00100012752	-	84	61.404	ENSFHEG00000013257	rbm46	87	61.404	Fundulus_heteroclitus
ENSHGLG00100012752	-	99	77.350	ENSGALG00000009278	RBM46	100	76.582	Gallus_gallus
ENSHGLG00100012752	-	63	76.846	ENSGAFG00000020245	rbm46	69	76.846	Gambusia_affinis
ENSHGLG00100012752	-	99	90.792	ENSGAGG00000002019	RBM46	95	86.573	Gopherus_agassizii
ENSHGLG00100012752	-	100	94.894	ENSGGOG00000001876	RBM46	100	94.894	Gorilla_gorilla
ENSHGLG00100012752	-	95	60.987	ENSHBUG00000009609	rbm46	91	65.871	Haplochromis_burtoni
ENSHGLG00100012752	-	99	82.618	ENSHGLG00000002940	-	100	83.301	Heterocephalus_glaber_female
ENSHGLG00100012752	-	100	92.614	ENSHGLG00000002463	-	99	99.306	Heterocephalus_glaber_female
ENSHGLG00100012752	-	94	81.136	ENSHGLG00000010742	-	97	73.592	Heterocephalus_glaber_female
ENSHGLG00100012752	-	98	49.372	ENSHCOG00000012998	rbm46	94	49.372	Hippocampus_comes
ENSHGLG00100012752	-	99	65.281	ENSIPUG00000024038	rbm46	96	65.281	Ictalurus_punctatus
ENSHGLG00100012752	-	100	94.894	ENSSTOG00000007918	RBM46	100	94.894	Ictidomys_tridecemlineatus
ENSHGLG00100012752	-	100	92.990	ENSJJAG00000003902	Rbm46	100	92.990	Jaculus_jaculus
ENSHGLG00100012752	-	99	64.301	ENSKMAG00000015127	rbm46	100	59.099	Kryptolebias_marmoratus
ENSHGLG00100012752	-	99	86.081	ENSLACG00000002062	RBM46	100	83.895	Latimeria_chalumnae
ENSHGLG00100012752	-	96	74.667	ENSLOCG00000008298	rbm46	96	75.000	Lepisosteus_oculatus
ENSHGLG00100012752	-	99	94.658	ENSLAFG00000015448	RBM46	100	94.658	Loxodonta_africana
ENSHGLG00100012752	-	100	94.894	ENSMFAG00000043485	RBM46	100	94.894	Macaca_fascicularis
ENSHGLG00100012752	-	100	94.845	ENSMMUG00000021147	RBM46	100	94.845	Macaca_mulatta
ENSHGLG00100012752	-	100	94.894	ENSMNEG00000002787	RBM46	100	94.894	Macaca_nemestrina
ENSHGLG00100012752	-	100	94.255	ENSMLEG00000029756	RBM46	100	94.255	Mandrillus_leucophaeus
ENSHGLG00100012752	-	95	65.778	ENSMAMG00000009093	rbm46	96	62.322	Mastacembelus_armatus
ENSHGLG00100012752	-	95	64.509	ENSMZEG00005027849	rbm46	97	62.292	Maylandia_zebra
ENSHGLG00100012752	-	99	77.778	ENSMGAG00000001457	RBM46	99	77.778	Meleagris_gallopavo
ENSHGLG00100012752	-	100	94.227	ENSMAUG00000009911	Rbm46	100	94.227	Mesocricetus_auratus
ENSHGLG00100012752	-	100	94.468	ENSMICG00000042747	RBM46	100	94.468	Microcebus_murinus
ENSHGLG00100012752	-	100	94.845	ENSMOCG00000001188	Rbm46	100	94.845	Microtus_ochrogaster
ENSHGLG00100012752	-	96	63.181	ENSMMOG00000011214	rbm46	97	58.509	Mola_mola
ENSHGLG00100012752	-	99	94.433	ENSMODG00000001302	RBM46	100	84.906	Monodelphis_domestica
ENSHGLG00100012752	-	94	63.431	ENSMALG00000006185	rbm46	93	63.431	Monopterus_albus
ENSHGLG00100012752	-	100	94.433	MGP_CAROLIEiJ_G0025101	Rbm46	100	94.433	Mus_caroli
ENSHGLG00100012752	-	100	94.021	ENSMUSG00000033882	Rbm46	100	94.021	Mus_musculus
ENSHGLG00100012752	-	100	94.845	MGP_PahariEiJ_G0026544	Rbm46	100	94.845	Mus_pahari
ENSHGLG00100012752	-	100	93.814	MGP_SPRETEiJ_G0026043	Rbm46	100	93.814	Mus_spretus
ENSHGLG00100012752	-	100	94.845	ENSMPUG00000005670	RBM46	100	94.845	Mustela_putorius_furo
ENSHGLG00100012752	-	99	94.231	ENSMLUG00000003221	RBM46	100	92.884	Myotis_lucifugus
ENSHGLG00100012752	-	100	94.227	ENSNGAG00000004231	Rbm46	100	94.227	Nannospalax_galili
ENSHGLG00100012752	-	95	64.574	ENSNBRG00000000273	rbm46	84	64.574	Neolamprologus_brichardi
ENSHGLG00100012752	-	100	94.681	ENSNLEG00000006184	RBM46	100	94.681	Nomascus_leucogenys
ENSHGLG00100012752	-	88	94.712	ENSMEUG00000013328	RBM46	99	94.634	Notamacropus_eugenii
ENSHGLG00100012752	-	60	93.640	ENSOPRG00000007136	RBM46	100	95.053	Ochotona_princeps
ENSHGLG00100012752	-	99	92.077	ENSODEG00000018002	-	93	92.050	Octodon_degus
ENSHGLG00100012752	-	100	94.043	ENSODEG00000000735	-	100	94.043	Octodon_degus
ENSHGLG00100012752	-	95	65.188	ENSONIG00000014096	rbm46	96	65.188	Oreochromis_niloticus
ENSHGLG00100012752	-	99	87.821	ENSOANG00000002141	RBM46	100	85.216	Ornithorhynchus_anatinus
ENSHGLG00100012752	-	99	94.647	ENSOCUG00000017859	RBM46	100	93.246	Oryctolagus_cuniculus
ENSHGLG00100012752	-	99	61.064	ENSORLG00000002429	rbm46	97	57.011	Oryzias_latipes
ENSHGLG00100012752	-	99	61.359	ENSORLG00020022154	rbm46	97	57.196	Oryzias_latipes_hni
ENSHGLG00100012752	-	98	63.399	ENSORLG00015020234	rbm46	97	60.537	Oryzias_latipes_hsok
ENSHGLG00100012752	-	95	61.369	ENSOMEG00000022580	rbm46	99	58.095	Oryzias_melastigma
ENSHGLG00100012752	-	99	95.075	ENSOGAG00000005647	RBM46	100	93.621	Otolemur_garnettii
ENSHGLG00100012752	-	100	94.021	ENSOARG00000016406	RBM46	100	94.021	Ovis_aries
ENSHGLG00100012752	-	100	94.894	ENSPPAG00000043236	RBM46	100	94.894	Pan_paniscus
ENSHGLG00100012752	-	100	94.845	ENSPPRG00000009416	RBM46	100	94.845	Panthera_pardus
ENSHGLG00100012752	-	100	94.845	ENSPTIG00000017449	RBM46	100	94.845	Panthera_tigris_altaica
ENSHGLG00100012752	-	100	94.894	ENSPTRG00000016538	RBM46	100	94.894	Pan_troglodytes
ENSHGLG00100012752	-	100	94.894	ENSPANG00000004186	RBM46	100	94.894	Papio_anubis
ENSHGLG00100012752	-	99	69.892	ENSPKIG00000015334	rbm46	92	66.919	Paramormyrops_kingsleyae
ENSHGLG00100012752	-	100	91.064	ENSPSIG00000006429	RBM46	99	88.139	Pelodiscus_sinensis
ENSHGLG00100012752	-	95	80.150	ENSPMGG00000019872	rbm46	94	80.150	Periophthalmus_magnuspinnatus
ENSHGLG00100012752	-	100	94.227	ENSPEMG00000013899	Rbm46	100	94.227	Peromyscus_maniculatus_bairdii
ENSHGLG00100012752	-	100	94.227	ENSPCIG00000029626	RBM46	100	94.227	Phascolarctos_cinereus
ENSHGLG00100012752	-	87	75.490	ENSPFOG00000001079	rbm46	75	75.490	Poecilia_formosa
ENSHGLG00100012752	-	99	62.264	ENSPLAG00000004541	rbm46	98	56.738	Poecilia_latipinna
ENSHGLG00100012752	-	97	64.693	ENSPMEG00000015724	rbm46	92	64.693	Poecilia_mexicana
ENSHGLG00100012752	-	99	62.264	ENSPREG00000014464	rbm46	98	63.482	Poecilia_reticulata
ENSHGLG00100012752	-	99	94.647	ENSPPYG00000015144	RBM46	100	93.433	Pongo_abelii
ENSHGLG00100012752	-	99	87.794	ENSPCAG00000003110	RBM46	99	86.090	Procavia_capensis
ENSHGLG00100012752	-	100	94.681	ENSPCOG00000024347	RBM46	100	94.681	Propithecus_coquereli
ENSHGLG00100012752	-	99	95.075	ENSPVAG00000008376	RBM46	100	93.246	Pteropus_vampyrus
ENSHGLG00100012752	-	95	67.174	ENSPNAG00000025312	rbm46	99	62.571	Pygocentrus_nattereri
ENSHGLG00100012752	-	99	94.218	ENSRNOG00000025823	Rbm46	100	92.683	Rattus_norvegicus
ENSHGLG00100012752	-	100	95.106	ENSRBIG00000032583	RBM46	100	95.106	Rhinopithecus_bieti
ENSHGLG00100012752	-	100	94.894	ENSRROG00000044288	RBM46	100	94.894	Rhinopithecus_roxellana
ENSHGLG00100012752	-	100	94.894	ENSSBOG00000033028	RBM46	100	94.894	Saimiri_boliviensis_boliviensis
ENSHGLG00100012752	-	99	94.433	ENSSHAG00000012596	RBM46	100	92.683	Sarcophilus_harrisii
ENSHGLG00100012752	-	98	71.179	ENSSFOG00015000087	rbm46	98	67.304	Scleropages_formosus
ENSHGLG00100012752	-	95	62.556	ENSSMAG00000017042	rbm46	93	62.556	Scophthalmus_maximus
ENSHGLG00100012752	-	97	65.801	ENSSDUG00000020645	rbm46	89	65.801	Seriola_dumerili
ENSHGLG00100012752	-	99	94.861	ENSSARG00000006520	RBM46	100	93.433	Sorex_araneus
ENSHGLG00100012752	-	99	89.103	ENSSPUG00000004773	-	98	89.103	Sphenodon_punctatus
ENSHGLG00100012752	-	99	91.006	ENSSPUG00000012525	-	100	87.500	Sphenodon_punctatus
ENSHGLG00100012752	-	96	62.168	ENSSPAG00000013697	rbm46	97	61.159	Stegastes_partitus
ENSHGLG00100012752	-	100	94.227	ENSSSCG00000008994	RBM46	100	94.227	Sus_scrofa
ENSHGLG00100012752	-	99	82.655	ENSTGUG00000005307	RBM46	100	82.655	Taeniopygia_guttata
ENSHGLG00100012752	-	97	62.445	ENSTRUG00000004237	rbm46	91	62.445	Takifugu_rubripes
ENSHGLG00100012752	-	97	61.656	ENSTNIG00000008714	rbm46	94	56.731	Tetraodon_nigroviridis
ENSHGLG00100012752	-	99	91.649	ENSTBEG00000013949	RBM46	100	89.306	Tupaia_belangeri
ENSHGLG00100012752	-	99	92.934	ENSTTRG00000001239	RBM46	100	91.557	Tursiops_truncatus
ENSHGLG00100012752	-	100	94.845	ENSUAMG00000026593	RBM46	100	94.845	Ursus_americanus
ENSHGLG00100012752	-	100	94.639	ENSUMAG00000016442	RBM46	100	94.639	Ursus_maritimus
ENSHGLG00100012752	-	100	94.845	ENSVVUG00000024957	RBM46	100	94.845	Vulpes_vulpes
ENSHGLG00100012752	-	99	55.297	ENSXETG00000032344	-	100	54.089	Xenopus_tropicalis
ENSHGLG00100012752	-	99	75.322	ENSXETG00000022412	-	99	71.617	Xenopus_tropicalis
ENSHGLG00100012752	-	78	69.648	ENSXETG00000032067	-	100	71.003	Xenopus_tropicalis
ENSHGLG00100012752	-	95	64.270	ENSXMAG00000008237	rbm46	93	62.683	Xiphophorus_maculatus