EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100012858 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 12423 bases
Position: chrJH172606.1:155313-167735
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100017435	RRM_1	PF00076.22	1.5e-09	1	1
ENSHGLP00100017434	RRM_1	PF00076.22	3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100017619	-	357	-	ENSHGLP00100017434	118 (aa)	-	-
ENSHGLT00100017620	-	385	-	ENSHGLP00100017435	93 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100012858's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100012858's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100012858	-	97	93.407	ENSHGLG00100012643	-	55	93.407
ENSHGLG00100012858	-	97	30.769	ENSHGLG00100001361	-	85	30.769
ENSHGLG00100012858	-	100	100.000	ENSHGLG00100002570	-	96	90.476

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100012858	-	100	89.362	ENSG00000198000	NOL8	93	89.362	Homo_sapiens
ENSHGLG00100012858	-	92	59.770	ENSAPOG00000008905	-	81	55.769	Acanthochromis_polyacanthus
ENSHGLG00100012858	-	92	59.770	ENSAOCG00000003570	-	96	59.770	Amphiprion_ocellaris
ENSHGLG00100012858	-	86	33.750	ENSAPEG00000020964	-	62	33.750	Amphiprion_percula
ENSHGLG00100012858	-	92	59.770	ENSAPEG00000004400	-	96	59.770	Amphiprion_percula
ENSHGLG00100012858	-	100	85.106	ENSANAG00000033271	NOL8	98	73.770	Aotus_nancymaae
ENSHGLG00100012858	-	100	61.702	ENSAMXG00000029217	-	100	57.143	Astyanax_mexicanus
ENSHGLG00100012858	-	100	87.234	ENSCJAG00000039875	NOL8	98	74.194	Callithrix_jacchus
ENSHGLG00100012858	-	100	97.872	ENSCPOG00000031767	-	100	97.872	Cavia_porcellus
ENSHGLG00100012858	-	100	78.723	ENSCCAG00000026399	NOL8	92	78.723	Cebus_capucinus
ENSHGLG00100012858	-	98	80.435	ENSCATG00000038353	-	97	70.085	Cercocebus_atys
ENSHGLG00100012858	-	100	87.234	ENSCGRG00001016459	-	100	87.234	Cricetulus_griseus_chok1gshd
ENSHGLG00100012858	-	100	87.234	ENSCGRG00000016885	-	100	87.234	Cricetulus_griseus_crigri
ENSHGLG00100012858	-	100	55.319	ENSCSEG00000012803	-	100	55.319	Cynoglossus_semilaevis
ENSHGLG00100012858	-	92	57.471	ENSCVAG00000009871	-	90	57.471	Cyprinodon_variegatus
ENSHGLG00100012858	-	100	88.298	ENSDORG00000025458	-	100	88.298	Dipodomys_ordii
ENSHGLG00100012858	-	100	86.170	ENSEASG00005013182	NOL8	95	75.806	Equus_asinus_asinus
ENSHGLG00100012858	-	100	87.234	ENSFCAG00000000818	NOL8	98	74.400	Felis_catus
ENSHGLG00100012858	-	100	97.872	ENSFDAG00000016216	-	100	97.872	Fukomys_damarensis
ENSHGLG00100012858	-	92	63.218	ENSFHEG00000017935	-	90	63.218	Fundulus_heteroclitus
ENSHGLG00100012858	-	92	60.920	ENSGAFG00000001708	-	82	60.000	Gambusia_affinis
ENSHGLG00100012858	-	73	55.072	ENSGAGG00000002984	-	90	55.072	Gopherus_agassizii
ENSHGLG00100012858	-	80	58.667	ENSGAGG00000002259	-	86	58.667	Gopherus_agassizii
ENSHGLG00100012858	-	72	55.882	ENSGAGG00000010376	-	86	55.882	Gopherus_agassizii
ENSHGLG00100012858	-	99	49.462	ENSGAGG00000001685	-	86	49.462	Gopherus_agassizii
ENSHGLG00100012858	-	89	57.143	ENSGAGG00000004839	-	83	57.143	Gopherus_agassizii
ENSHGLG00100012858	-	97	52.747	ENSGAGG00000002268	-	90	52.747	Gopherus_agassizii
ENSHGLG00100012858	-	98	47.619	ENSGGOG00000025612	NOL8	97	47.619	Gorilla_gorilla
ENSHGLG00100012858	-	98	77.174	ENSGGOG00000023838	-	98	71.717	Gorilla_gorilla
ENSHGLG00100012858	-	100	98.936	ENSHGLG00000010060	-	100	98.936	Heterocephalus_glaber_female
ENSHGLG00100012858	-	97	93.407	ENSHGLG00000001400	-	55	93.407	Heterocephalus_glaber_female
ENSHGLG00100012858	-	92	57.471	ENSHCOG00000012856	nol8	73	57.471	Hippocampus_comes
ENSHGLG00100012858	-	100	90.426	ENSJJAG00000011518	-	98	75.591	Jaculus_jaculus
ENSHGLG00100012858	-	100	80.851	ENSMFAG00000031716	-	79	78.261	Macaca_fascicularis
ENSHGLG00100012858	-	100	89.362	ENSMFAG00000034500	NOL8	93	89.362	Macaca_fascicularis
ENSHGLG00100012858	-	100	89.362	ENSMMUG00000004629	NOL8	98	76.378	Macaca_mulatta
ENSHGLG00100012858	-	100	80.851	ENSMNEG00000005430	-	79	78.261	Macaca_nemestrina
ENSHGLG00100012858	-	100	89.362	ENSMNEG00000036927	NOL8	93	89.362	Macaca_nemestrina
ENSHGLG00100012858	-	100	87.234	ENSMLEG00000037641	NOL8	93	87.234	Mandrillus_leucophaeus
ENSHGLG00100012858	-	87	80.488	ENSMLEG00000035584	-	97	64.957	Mandrillus_leucophaeus
ENSHGLG00100012858	-	100	59.574	ENSMAMG00000000989	-	100	59.574	Mastacembelus_armatus
ENSHGLG00100012858	-	100	89.362	ENSMAUG00000008173	-	100	89.362	Mesocricetus_auratus
ENSHGLG00100012858	-	100	89.362	ENSMOCG00000008757	-	100	89.362	Microtus_ochrogaster
ENSHGLG00100012858	-	92	57.471	ENSMMOG00000013534	-	86	57.471	Mola_mola
ENSHGLG00100012858	-	92	59.770	ENSMALG00000022669	-	93	58.889	Monopterus_albus
ENSHGLG00100012858	-	100	88.298	ENSMUSG00000021392	Nol8	100	88.172	Mus_musculus
ENSHGLG00100012858	-	100	89.362	ENSNGAG00000021592	-	100	89.362	Nannospalax_galili
ENSHGLG00100012858	-	92	59.551	ENSNBRG00000012679	-	69	58.889	Neolamprologus_brichardi
ENSHGLG00100012858	-	95	80.899	ENSNLEG00000028854	-	97	67.521	Nomascus_leucogenys
ENSHGLG00100012858	-	100	88.298	ENSNLEG00000016357	NOL8	93	88.298	Nomascus_leucogenys
ENSHGLG00100012858	-	100	89.362	ENSPPAG00000002204	NOL8	93	89.362	Pan_paniscus
ENSHGLG00100012858	-	100	88.298	ENSPPRG00000008693	NOL8	98	75.200	Panthera_pardus
ENSHGLG00100012858	-	100	87.234	ENSPTIG00000015402	NOL8	98	74.400	Panthera_tigris_altaica
ENSHGLG00100012858	-	100	89.362	ENSPTRG00000021109	NOL8	93	89.362	Pan_troglodytes
ENSHGLG00100012858	-	100	89.362	ENSPANG00000024725	NOL8	93	89.362	Papio_anubis
ENSHGLG00100012858	-	100	81.915	ENSPANG00000031553	-	62	73.333	Papio_anubis
ENSHGLG00100012858	-	100	80.851	ENSPANG00000033194	-	89	80.000	Papio_anubis
ENSHGLG00100012858	-	92	57.471	ENSPMGG00000014670	-	92	48.333	Periophthalmus_magnuspinnatus
ENSHGLG00100012858	-	100	89.362	ENSPEMG00000012756	Nol8	100	89.362	Peromyscus_maniculatus_bairdii
ENSHGLG00100012858	-	92	63.218	ENSPLAG00000008235	-	95	62.500	Poecilia_latipinna
ENSHGLG00100012858	-	92	63.218	ENSPMEG00000006567	-	95	62.500	Poecilia_mexicana
ENSHGLG00100012858	-	92	62.069	ENSPREG00000010175	-	93	61.111	Poecilia_reticulata
ENSHGLG00100012858	-	92	58.427	ENSPNYG00000002021	-	84	57.778	Pundamilia_nyererei
ENSHGLG00100012858	-	100	80.851	ENSRBIG00000011855	-	97	71.795	Rhinopithecus_bieti
ENSHGLG00100012858	-	100	86.170	ENSRROG00000043673	NOL8	93	86.170	Rhinopithecus_roxellana
ENSHGLG00100012858	-	100	80.851	ENSRROG00000033368	-	97	71.795	Rhinopithecus_roxellana
ENSHGLG00100012858	-	100	87.234	ENSSBOG00000024228	NOL8	93	87.234	Saimiri_boliviensis_boliviensis
ENSHGLG00100012858	-	99	59.574	ENSSMAG00000004064	-	99	59.574	Scophthalmus_maximus
ENSHGLG00100012858	-	92	59.770	ENSSLDG00000007021	-	92	59.091	Seriola_lalandi_dorsalis
ENSHGLG00100012858	-	99	53.191	ENSTRUG00000009278	nol8	83	53.191	Takifugu_rubripes
ENSHGLG00100012858	-	92	58.621	ENSXMAG00000027913	-	82	57.778	Xiphophorus_maculatus