EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100013261 (Gene tree)
Gene ID: -
Gene Symbol: CHD5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 44614 bases
Position: chrJH173407.1:4992290-5036903
Accession: 16816
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100017989	ResIII	PF04851.15	1.7e-08	1	1
ENSHGLP00100017990	ResIII	PF04851.15	1.8e-08	1	1
ENSHGLP00100017988	ResIII	PF04851.15	2.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100018179	CHD5-202	5676	-	ENSHGLP00100017989	1891 (aa)	-	-
ENSHGLT00100018178	CHD5-201	5745	-	ENSHGLP00100017988	1914 (aa)	-	-
ENSHGLT00100018180	CHD5-203	5814	-	ENSHGLP00100017990	1937 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100013261's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100013261's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100013261	CHD5	93	66.199	ENSHGLG00100007450	-	95	66.400
ENSHGLG00100013261	CHD5	81	60.535	ENSHGLG00100013902	CHD3	92	58.207

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100013261	CHD5	97	89.062	ENSG00000116254	CHD5	96	96.369	Homo_sapiens
ENSHGLG00100013261	CHD5	97	89.045	ENSAMEG00000009880	CHD5	100	88.786	Ailuropoda_melanoleuca
ENSHGLG00100013261	CHD5	92	72.633	ENSACIG00000012582	chd5	98	72.453	Amphilophus_citrinellus
ENSHGLG00100013261	CHD5	94	72.254	ENSAOCG00000020356	chd5	92	72.053	Amphiprion_ocellaris
ENSHGLG00100013261	CHD5	95	77.790	ENSAPLG00000015475	CHD5	98	78.190	Anas_platyrhynchos
ENSHGLG00100013261	CHD5	99	75.807	ENSACAG00000002441	CHD5	99	77.097	Anolis_carolinensis
ENSHGLG00100013261	CHD5	86	88.325	ENSANAG00000001078	CHD5	91	88.287	Aotus_nancymaae
ENSHGLG00100013261	CHD5	92	68.915	ENSACLG00000003012	chd5	96	69.227	Astatotilapia_calliptera
ENSHGLG00100013261	CHD5	85	77.815	ENSAMXG00000008921	chd5	95	81.538	Astyanax_mexicanus
ENSHGLG00100013261	CHD5	93	87.842	ENSBTAG00000040477	CHD5	100	88.962	Bos_taurus
ENSHGLG00100013261	CHD5	97	88.854	ENSCJAG00000000101	CHD5	99	88.568	Callithrix_jacchus
ENSHGLG00100013261	CHD5	91	89.133	ENSCAFG00000019545	CHD5	100	88.846	Canis_familiaris
ENSHGLG00100013261	CHD5	99	87.386	ENSCAFG00020008689	CHD5	98	87.255	Canis_lupus_dingo
ENSHGLG00100013261	CHD5	99	86.831	ENSCHIG00000015027	CHD5	99	86.941	Capra_hircus
ENSHGLG00100013261	CHD5	97	85.229	ENSTSYG00000033991	CHD5	99	84.859	Carlito_syrichta
ENSHGLG00100013261	CHD5	97	90.098	ENSCAPG00000009294	CHD5	100	90.098	Cavia_aperea
ENSHGLG00100013261	CHD5	97	89.995	ENSCPOG00000025080	CHD5	100	89.995	Cavia_porcellus
ENSHGLG00100013261	CHD5	97	88.958	ENSCCAG00000024756	CHD5	99	88.671	Cebus_capucinus
ENSHGLG00100013261	CHD5	97	88.284	ENSCATG00000043011	CHD5	99	87.951	Cercocebus_atys
ENSHGLG00100013261	CHD5	99	89.059	ENSCLAG00000010589	CHD5	99	90.427	Chinchilla_lanigera
ENSHGLG00100013261	CHD5	97	89.165	ENSCSAG00000000733	CHD5	99	88.826	Chlorocebus_sabaeus
ENSHGLG00100013261	CHD5	93	82.595	ENSCPBG00000019363	CHD5	100	84.072	Chrysemys_picta_bellii
ENSHGLG00100013261	CHD5	97	89.171	ENSCANG00000032302	CHD5	99	89.142	Colobus_angolensis_palliatus
ENSHGLG00100013261	CHD5	53	85.192	ENSCGRG00001011042	Chd5	100	85.192	Cricetulus_griseus_chok1gshd
ENSHGLG00100013261	CHD5	98	88.000	ENSCGRG00000011341	Chd5	99	87.921	Cricetulus_griseus_crigri
ENSHGLG00100013261	CHD5	95	71.808	ENSDARG00000105083	chd5	97	73.172	Danio_rerio
ENSHGLG00100013261	CHD5	94	62.481	ENSDARG00000025789	chd4b	96	63.076	Danio_rerio
ENSHGLG00100013261	CHD5	97	84.695	ENSDNOG00000046342	CHD5	99	84.695	Dasypus_novemcinctus
ENSHGLG00100013261	CHD5	97	88.722	ENSDORG00000005923	Chd5	100	88.682	Dipodomys_ordii
ENSHGLG00100013261	CHD5	99	86.207	ENSEASG00005021464	CHD5	96	95.370	Equus_asinus_asinus
ENSHGLG00100013261	CHD5	99	85.585	ENSECAG00000025043	CHD5	98	96.016	Equus_caballus
ENSHGLG00100013261	CHD5	75	98.592	ENSEEUG00000002772	CHD5	77	98.592	Erinaceus_europaeus
ENSHGLG00100013261	CHD5	94	69.776	ENSELUG00000010742	chd5	92	82.213	Esox_lucius
ENSHGLG00100013261	CHD5	97	88.434	ENSFCAG00000006319	CHD5	99	88.087	Felis_catus
ENSHGLG00100013261	CHD5	99	80.884	ENSFALG00000009740	CHD5	99	82.132	Ficedula_albicollis
ENSHGLG00100013261	CHD5	99	88.895	ENSFDAG00000012881	CHD5	98	89.012	Fukomys_damarensis
ENSHGLG00100013261	CHD5	97	81.789	ENSGALG00000000747	CHD5	99	81.870	Gallus_gallus
ENSHGLG00100013261	CHD5	55	73.291	ENSGACG00000004389	chd5	93	73.358	Gasterosteus_aculeatus
ENSHGLG00100013261	CHD5	86	96.517	ENSGAGG00000001590	CHD5	99	95.610	Gopherus_agassizii
ENSHGLG00100013261	CHD5	97	89.130	ENSGGOG00000000708	CHD5	100	88.860	Gorilla_gorilla
ENSHGLG00100013261	CHD5	92	70.477	ENSHBUG00000013453	chd5	96	70.793	Haplochromis_burtoni
ENSHGLG00100013261	CHD5	99	93.310	ENSHGLG00000018184	CHD5	100	93.417	Heterocephalus_glaber_female
ENSHGLG00100013261	CHD5	94	71.367	ENSIPUG00000005446	chd5	82	73.542	Ictalurus_punctatus
ENSHGLG00100013261	CHD5	98	88.428	ENSSTOG00000002778	CHD5	100	87.694	Ictidomys_tridecemlineatus
ENSHGLG00100013261	CHD5	97	88.924	ENSJJAG00000019072	Chd5	99	87.880	Jaculus_jaculus
ENSHGLG00100013261	CHD5	96	74.806	ENSLOCG00000004944	chd5	98	72.084	Lepisosteus_oculatus
ENSHGLG00100013261	CHD5	97	89.297	ENSLAFG00000006348	CHD5	100	89.124	Loxodonta_africana
ENSHGLG00100013261	CHD5	97	89.147	ENSMFAG00000033993	CHD5	100	88.956	Macaca_fascicularis
ENSHGLG00100013261	CHD5	98	88.564	ENSMMUG00000016838	CHD5	99	88.906	Macaca_mulatta
ENSHGLG00100013261	CHD5	97	89.269	ENSMNEG00000040044	CHD5	99	88.929	Macaca_nemestrina
ENSHGLG00100013261	CHD5	97	86.101	ENSMLEG00000039166	CHD5	100	85.889	Mandrillus_leucophaeus
ENSHGLG00100013261	CHD5	87	72.863	ENSMZEG00005000841	chd5	92	73.012	Maylandia_zebra
ENSHGLG00100013261	CHD5	99	80.771	ENSMGAG00000001055	CHD5	99	81.917	Meleagris_gallopavo
ENSHGLG00100013261	CHD5	97	85.570	ENSMICG00000017862	CHD5	99	85.346	Microcebus_murinus
ENSHGLG00100013261	CHD5	98	87.767	ENSMOCG00000011049	Chd5	99	87.818	Microtus_ochrogaster
ENSHGLG00100013261	CHD5	89	76.695	ENSMODG00000006294	CHD5	87	79.750	Monodelphis_domestica
ENSHGLG00100013261	CHD5	94	71.737	ENSMALG00000002831	chd5	96	72.264	Monopterus_albus
ENSHGLG00100013261	CHD5	98	87.448	MGP_CAROLIEiJ_G0026857	Chd5	99	88.388	Mus_caroli
ENSHGLG00100013261	CHD5	98	87.103	ENSMUSG00000005045	Chd5	99	87.940	Mus_musculus
ENSHGLG00100013261	CHD5	98	87.396	MGP_PahariEiJ_G0029205	Chd5	99	88.336	Mus_pahari
ENSHGLG00100013261	CHD5	98	87.292	MGP_SPRETEiJ_G0027850	Chd5	99	88.232	Mus_spretus
ENSHGLG00100013261	CHD5	97	85.135	ENSMPUG00000007122	CHD5	99	87.523	Mustela_putorius_furo
ENSHGLG00100013261	CHD5	98	87.436	ENSNGAG00000019812	Chd5	97	87.328	Nannospalax_galili
ENSHGLG00100013261	CHD5	97	86.667	ENSNLEG00000010320	CHD5	100	86.024	Nomascus_leucogenys
ENSHGLG00100013261	CHD5	84	89.249	ENSOPRG00000004304	CHD5	84	89.249	Ochotona_princeps
ENSHGLG00100013261	CHD5	99	89.188	ENSODEG00000010262	CHD5	100	89.995	Octodon_degus
ENSHGLG00100013261	CHD5	94	70.715	ENSONIG00000000619	chd5	94	70.805	Oreochromis_niloticus
ENSHGLG00100013261	CHD5	96	69.223	ENSOANG00000001819	CHD5	99	69.018	Ornithorhynchus_anatinus
ENSHGLG00100013261	CHD5	97	87.214	ENSOGAG00000005703	CHD5	79	88.365	Otolemur_garnettii
ENSHGLG00100013261	CHD5	98	87.150	ENSOARG00000013425	CHD5	99	86.887	Ovis_aries
ENSHGLG00100013261	CHD5	97	89.084	ENSPPAG00000034048	CHD5	100	88.814	Pan_paniscus
ENSHGLG00100013261	CHD5	97	87.811	ENSPPRG00000009453	CHD5	99	87.468	Panthera_pardus
ENSHGLG00100013261	CHD5	97	83.385	ENSPTIG00000013926	CHD5	99	83.471	Panthera_tigris_altaica
ENSHGLG00100013261	CHD5	97	89.067	ENSPTRG00000000075	CHD5	99	88.729	Pan_troglodytes
ENSHGLG00100013261	CHD5	97	89.217	ENSPANG00000006765	CHD5	99	88.877	Papio_anubis
ENSHGLG00100013261	CHD5	94	72.619	ENSPKIG00000004282	chd5	98	72.225	Paramormyrops_kingsleyae
ENSHGLG00100013261	CHD5	94	76.759	ENSPSIG00000006414	CHD5	100	77.008	Pelodiscus_sinensis
ENSHGLG00100013261	CHD5	68	87.155	ENSPEMG00000014799	Chd5	100	87.155	Peromyscus_maniculatus_bairdii
ENSHGLG00100013261	CHD5	99	84.288	ENSPCIG00000028310	CHD5	98	84.845	Phascolarctos_cinereus
ENSHGLG00100013261	CHD5	92	70.708	ENSPLAG00000005343	chd5	88	78.218	Poecilia_latipinna
ENSHGLG00100013261	CHD5	94	90.741	ENSPPYG00000001952	CHD5	100	85.353	Pongo_abelii
ENSHGLG00100013261	CHD5	97	89.373	ENSPCOG00000022930	CHD5	99	89.032	Propithecus_coquereli
ENSHGLG00100013261	CHD5	92	72.496	ENSPNYG00000003183	chd5	98	71.259	Pundamilia_nyererei
ENSHGLG00100013261	CHD5	97	88.600	ENSRNOG00000011268	Chd5	99	88.025	Rattus_norvegicus
ENSHGLG00100013261	CHD5	98	85.722	ENSRBIG00000032140	CHD5	98	87.879	Rhinopithecus_bieti
ENSHGLG00100013261	CHD5	97	89.027	ENSRROG00000041146	CHD5	99	88.797	Rhinopithecus_roxellana
ENSHGLG00100013261	CHD5	97	84.755	ENSSBOG00000001955	CHD5	99	88.593	Saimiri_boliviensis_boliviensis
ENSHGLG00100013261	CHD5	95	79.663	ENSSHAG00000018641	CHD5	99	79.694	Sarcophilus_harrisii
ENSHGLG00100013261	CHD5	96	71.421	ENSSFOG00015006296	chd5	91	87.395	Scleropages_formosus
ENSHGLG00100013261	CHD5	92	73.077	ENSSDUG00000017526	chd5	97	73.634	Seriola_dumerili
ENSHGLG00100013261	CHD5	97	73.837	ENSSPUG00000010622	CHD5	98	74.295	Sphenodon_punctatus
ENSHGLG00100013261	CHD5	98	88.098	ENSSSCG00000003366	CHD5	100	88.792	Sus_scrofa
ENSHGLG00100013261	CHD5	94	80.387	ENSTGUG00000002634	-	100	80.387	Taeniopygia_guttata
ENSHGLG00100013261	CHD5	51	72.095	ENSTNIG00000004346	chd5	99	72.410	Tetraodon_nigroviridis
ENSHGLG00100013261	CHD5	97	86.746	ENSTTRG00000010468	CHD5	99	86.546	Tursiops_truncatus
ENSHGLG00100013261	CHD5	97	88.027	ENSUAMG00000024509	CHD5	97	90.393	Ursus_americanus
ENSHGLG00100013261	CHD5	97	88.194	ENSUMAG00000024173	CHD5	98	89.940	Ursus_maritimus
ENSHGLG00100013261	CHD5	99	87.733	ENSVVUG00000026480	CHD5	94	98.000	Vulpes_vulpes
ENSHGLG00100013261	CHD5	97	72.585	ENSXETG00000002904	chd5	81	75.932	Xenopus_tropicalis
ENSHGLG00100013261	CHD5	55	83.871	ENSXCOG00000014202	chd5	95	83.871	Xiphophorus_couchianus