EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00100013799 (Gene tree)
Gene ID: -
Gene Symbol: SF3A1
Alias: PRPF21|Prp21|SAP114|SF3a120
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 25952 bases
Position: chrJH166403.1:201476-227427
Accession: 101716117
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100018710	PRP21_like_P	PF12230.8	4.9e-52	1	1
ENSHGLP00100018710	Surp	PF01805.20	6.5e-46	1	2
ENSHGLP00100018710	Surp	PF01805.20	6.5e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100018905	-	2512	-	ENSHGLP00100018710	793 (aa)	XP_004843497	G5APV2

Gene Model

Click here to download ENSHGLG00100013799's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100013799's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100013799	SF3A1	100	98.865	ENSG00000099995	SF3A1	100	98.865	Homo_sapiens
ENSHGLG00100013799	SF3A1	100	83.396	ENSAPOG00000020465	sf3a1	99	84.783	Acanthochromis_polyacanthus
ENSHGLG00100013799	SF3A1	100	98.616	ENSAMEG00000007737	SF3A1	100	98.616	Ailuropoda_melanoleuca
ENSHGLG00100013799	SF3A1	100	84.403	ENSACIG00000020672	sf3a1	99	85.038	Amphilophus_citrinellus
ENSHGLG00100013799	SF3A1	100	83.125	ENSAOCG00000003060	sf3a1	99	84.783	Amphiprion_ocellaris
ENSHGLG00100013799	SF3A1	100	83.250	ENSAPEG00000010735	sf3a1	99	84.910	Amphiprion_percula
ENSHGLG00100013799	SF3A1	96	85.807	ENSATEG00000021201	sf3a1	98	85.090	Anabas_testudineus
ENSHGLG00100013799	SF3A1	95	94.055	ENSAPLG00000009057	SF3A1	99	93.161	Anas_platyrhynchos
ENSHGLG00100013799	SF3A1	100	85.961	ENSACAG00000009415	SF3A1	100	87.315	Anolis_carolinensis
ENSHGLG00100013799	SF3A1	100	98.865	ENSANAG00000032045	SF3A1	100	98.865	Aotus_nancymaae
ENSHGLG00100013799	SF3A1	100	84.230	ENSACLG00000012622	sf3a1	99	85.275	Astatotilapia_calliptera
ENSHGLG00100013799	SF3A1	99	83.609	ENSAMXG00000005382	sf3a1	99	84.170	Astyanax_mexicanus
ENSHGLG00100013799	SF3A1	100	99.243	ENSBTAG00000003390	SF3A1	100	99.243	Bos_taurus
ENSHGLG00100013799	SF3A1	84	43.447	WBGene00004188	prp-21	94	43.321	Caenorhabditis_elegans
ENSHGLG00100013799	SF3A1	100	98.991	ENSCJAG00000010370	SF3A1	100	98.991	Callithrix_jacchus
ENSHGLG00100013799	SF3A1	100	98.991	ENSCAFG00000012559	SF3A1	100	98.991	Canis_familiaris
ENSHGLG00100013799	SF3A1	100	98.991	ENSCAFG00020000838	SF3A1	100	98.991	Canis_lupus_dingo
ENSHGLG00100013799	SF3A1	100	99.117	ENSCHIG00000018642	SF3A1	100	99.117	Capra_hircus
ENSHGLG00100013799	SF3A1	100	99.496	ENSTSYG00000004739	SF3A1	100	99.496	Carlito_syrichta
ENSHGLG00100013799	SF3A1	94	81.709	ENSCAPG00000015414	SF3A1	98	81.709	Cavia_aperea
ENSHGLG00100013799	SF3A1	100	99.496	ENSCPOG00000014589	SF3A1	100	99.496	Cavia_porcellus
ENSHGLG00100013799	SF3A1	100	98.865	ENSCCAG00000032006	SF3A1	100	98.865	Cebus_capucinus
ENSHGLG00100013799	SF3A1	100	99.117	ENSCATG00000029241	SF3A1	100	99.117	Cercocebus_atys
ENSHGLG00100013799	SF3A1	100	98.991	ENSCLAG00000006508	SF3A1	100	98.991	Chinchilla_lanigera
ENSHGLG00100013799	SF3A1	100	98.991	ENSCSAG00000009470	SF3A1	100	98.991	Chlorocebus_sabaeus
ENSHGLG00100013799	SF3A1	61	99.083	ENSCHOG00000005201	SF3A1	69	99.083	Choloepus_hoffmanni
ENSHGLG00100013799	SF3A1	100	91.058	ENSCPBG00000007595	SF3A1	100	91.184	Chrysemys_picta_bellii
ENSHGLG00100013799	SF3A1	94	52.249	ENSCING00000008526	-	66	58.046	Ciona_intestinalis
ENSHGLG00100013799	SF3A1	96	51.613	ENSCSAVG00000005608	-	92	62.712	Ciona_savignyi
ENSHGLG00100013799	SF3A1	100	98.991	ENSCANG00000033564	SF3A1	100	98.991	Colobus_angolensis_palliatus
ENSHGLG00100013799	SF3A1	100	98.865	ENSCGRG00001008933	Sf3a1	100	98.865	Cricetulus_griseus_chok1gshd
ENSHGLG00100013799	SF3A1	100	98.865	ENSCGRG00000006127	Sf3a1	100	98.865	Cricetulus_griseus_crigri
ENSHGLG00100013799	SF3A1	99	82.107	ENSCSEG00000010792	sf3a1	99	82.074	Cynoglossus_semilaevis
ENSHGLG00100013799	SF3A1	100	82.893	ENSCVAG00000004560	sf3a1	99	83.077	Cyprinodon_variegatus
ENSHGLG00100013799	SF3A1	100	82.412	ENSDARG00000041887	sf3a1	97	84.746	Danio_rerio
ENSHGLG00100013799	SF3A1	100	98.742	ENSDNOG00000010629	SF3A1	100	98.742	Dasypus_novemcinctus
ENSHGLG00100013799	SF3A1	100	99.243	ENSDORG00000005613	Sf3a1	100	99.243	Dipodomys_ordii
ENSHGLG00100013799	SF3A1	79	61.682	FBgn0266917	Sf3a1	85	60.000	Drosophila_melanogaster
ENSHGLG00100013799	SF3A1	84	97.006	ENSETEG00000017194	SF3A1	100	94.729	Echinops_telfairi
ENSHGLG00100013799	SF3A1	100	65.059	ENSEBUG00000001285	sf3a1	96	67.327	Eptatretus_burgeri
ENSHGLG00100013799	SF3A1	100	99.369	ENSEASG00005010254	SF3A1	100	99.369	Equus_asinus_asinus
ENSHGLG00100013799	SF3A1	100	99.369	ENSECAG00000023962	SF3A1	100	99.369	Equus_caballus
ENSHGLG00100013799	SF3A1	73	95.082	ENSEEUG00000003159	SF3A1	82	95.082	Erinaceus_europaeus
ENSHGLG00100013799	SF3A1	100	82.456	ENSELUG00000022578	sf3a1	98	82.821	Esox_lucius
ENSHGLG00100013799	SF3A1	100	99.117	ENSFCAG00000011932	SF3A1	100	99.117	Felis_catus
ENSHGLG00100013799	SF3A1	95	92.989	ENSFALG00000006944	SF3A1	100	91.688	Ficedula_albicollis
ENSHGLG00100013799	SF3A1	100	99.622	ENSFDAG00000009560	SF3A1	100	99.622	Fukomys_damarensis
ENSHGLG00100013799	SF3A1	100	84.151	ENSFHEG00000010866	sf3a1	99	84.359	Fundulus_heteroclitus
ENSHGLG00100013799	SF3A1	100	81.108	ENSGMOG00000016024	sf3a1	99	80.485	Gadus_morhua
ENSHGLG00100013799	SF3A1	95	94.048	ENSGALG00000007937	SF3A1	100	92.191	Gallus_gallus
ENSHGLG00100013799	SF3A1	100	83.019	ENSGAFG00000009111	sf3a1	99	83.333	Gambusia_affinis
ENSHGLG00100013799	SF3A1	100	82.116	ENSGACG00000011893	sf3a1	97	83.508	Gasterosteus_aculeatus
ENSHGLG00100013799	SF3A1	96	91.196	ENSGAGG00000000762	SF3A1	99	91.327	Gopherus_agassizii
ENSHGLG00100013799	SF3A1	100	98.865	ENSGGOG00000012631	SF3A1	100	98.865	Gorilla_gorilla
ENSHGLG00100013799	SF3A1	100	84.230	ENSHBUG00000015795	sf3a1	99	85.275	Haplochromis_burtoni
ENSHGLG00100013799	SF3A1	100	100.000	ENSHGLG00000007907	SF3A1	100	100.000	Heterocephalus_glaber_female
ENSHGLG00100013799	SF3A1	100	80.252	ENSHCOG00000015423	sf3a1	99	80.645	Hippocampus_comes
ENSHGLG00100013799	SF3A1	96	82.552	ENSIPUG00000002470	sf3a1	98	82.812	Ictalurus_punctatus
ENSHGLG00100013799	SF3A1	100	99.496	ENSSTOG00000013892	SF3A1	100	99.496	Ictidomys_tridecemlineatus
ENSHGLG00100013799	SF3A1	100	99.118	ENSJJAG00000022566	Sf3a1	100	99.118	Jaculus_jaculus
ENSHGLG00100013799	SF3A1	100	82.767	ENSKMAG00000002400	sf3a1	99	83.846	Kryptolebias_marmoratus
ENSHGLG00100013799	SF3A1	100	82.516	ENSLBEG00000022974	sf3a1	99	83.097	Labrus_bergylta
ENSHGLG00100013799	SF3A1	100	87.077	ENSLACG00000003565	SF3A1	97	88.411	Latimeria_chalumnae
ENSHGLG00100013799	SF3A1	100	85.088	ENSLOCG00000008251	sf3a1	97	86.883	Lepisosteus_oculatus
ENSHGLG00100013799	SF3A1	100	98.739	ENSLAFG00000000448	SF3A1	100	98.739	Loxodonta_africana
ENSHGLG00100013799	SF3A1	98	62.038	ENSLAFG00000026032	-	98	62.038	Loxodonta_africana
ENSHGLG00100013799	SF3A1	100	98.865	ENSMFAG00000031979	SF3A1	100	98.865	Macaca_fascicularis
ENSHGLG00100013799	SF3A1	100	98.865	ENSMMUG00000005547	SF3A1	100	98.865	Macaca_mulatta
ENSHGLG00100013799	SF3A1	100	98.739	ENSMNEG00000037229	SF3A1	100	98.739	Macaca_nemestrina
ENSHGLG00100013799	SF3A1	100	98.991	ENSMLEG00000041908	SF3A1	100	98.991	Mandrillus_leucophaeus
ENSHGLG00100013799	SF3A1	97	85.640	ENSMAMG00000006460	sf3a1	97	85.770	Mastacembelus_armatus
ENSHGLG00100013799	SF3A1	100	84.230	ENSMZEG00005009633	sf3a1	99	85.275	Maylandia_zebra
ENSHGLG00100013799	SF3A1	95	94.048	ENSMGAG00000001330	SF3A1	99	93.152	Meleagris_gallopavo
ENSHGLG00100013799	SF3A1	92	95.219	ENSMAUG00000020317	Sf3a1	94	95.219	Mesocricetus_auratus
ENSHGLG00100013799	SF3A1	100	98.739	ENSMICG00000010038	SF3A1	100	98.739	Microcebus_murinus
ENSHGLG00100013799	SF3A1	100	98.739	ENSMOCG00000008438	Sf3a1	100	98.739	Microtus_ochrogaster
ENSHGLG00100013799	SF3A1	100	81.635	ENSMMOG00000015588	sf3a1	98	82.111	Mola_mola
ENSHGLG00100013799	SF3A1	100	97.856	ENSMODG00000009270	SF3A1	100	97.856	Monodelphis_domestica
ENSHGLG00100013799	SF3A1	100	84.277	ENSMALG00000000148	sf3a1	99	86.240	Monopterus_albus
ENSHGLG00100013799	SF3A1	100	98.235	MGP_CAROLIEiJ_G0016029	Sf3a1	100	98.235	Mus_caroli
ENSHGLG00100013799	SF3A1	100	98.235	ENSMUSG00000002129	Sf3a1	100	98.235	Mus_musculus
ENSHGLG00100013799	SF3A1	100	98.235	MGP_PahariEiJ_G0016862	Sf3a1	100	98.235	Mus_pahari
ENSHGLG00100013799	SF3A1	100	98.235	MGP_SPRETEiJ_G0016870	Sf3a1	100	98.235	Mus_spretus
ENSHGLG00100013799	SF3A1	100	98.991	ENSMPUG00000013144	SF3A1	100	98.991	Mustela_putorius_furo
ENSHGLG00100013799	SF3A1	100	99.243	ENSMLUG00000002139	SF3A1	100	99.243	Myotis_lucifugus
ENSHGLG00100013799	SF3A1	100	98.991	ENSNGAG00000016977	Sf3a1	100	98.991	Nannospalax_galili
ENSHGLG00100013799	SF3A1	100	83.645	ENSNBRG00000016642	sf3a1	96	86.693	Neolamprologus_brichardi
ENSHGLG00100013799	SF3A1	100	98.991	ENSNLEG00000003686	SF3A1	100	98.991	Nomascus_leucogenys
ENSHGLG00100013799	SF3A1	96	88.158	ENSMEUG00000008741	SF3A1	100	88.158	Notamacropus_eugenii
ENSHGLG00100013799	SF3A1	100	98.487	ENSOPRG00000016636	SF3A1	100	98.487	Ochotona_princeps
ENSHGLG00100013799	SF3A1	100	99.243	ENSODEG00000002571	SF3A1	100	99.243	Octodon_degus
ENSHGLG00100013799	SF3A1	100	83.980	ENSONIG00000010848	sf3a1	99	84.655	Oreochromis_niloticus
ENSHGLG00100013799	SF3A1	100	98.865	ENSOCUG00000007633	SF3A1	100	98.865	Oryctolagus_cuniculus
ENSHGLG00100013799	SF3A1	96	81.890	ENSORLG00000013050	sf3a1	99	83.445	Oryzias_latipes
ENSHGLG00100013799	SF3A1	96	82.677	ENSORLG00020003236	sf3a1	94	83.578	Oryzias_latipes_hni
ENSHGLG00100013799	SF3A1	100	82.264	ENSORLG00015017411	sf3a1	99	83.871	Oryzias_latipes_hsok
ENSHGLG00100013799	SF3A1	100	82.642	ENSOMEG00000013362	sf3a1	99	83.484	Oryzias_melastigma
ENSHGLG00100013799	SF3A1	100	98.865	ENSOGAG00000012931	SF3A1	100	98.865	Otolemur_garnettii
ENSHGLG00100013799	SF3A1	100	97.352	ENSOARG00000006849	SF3A1	100	97.352	Ovis_aries
ENSHGLG00100013799	SF3A1	100	97.856	ENSPPAG00000041790	SF3A1	100	97.856	Pan_paniscus
ENSHGLG00100013799	SF3A1	100	99.117	ENSPPRG00000004391	SF3A1	100	99.117	Panthera_pardus
ENSHGLG00100013799	SF3A1	97	99.223	ENSPTIG00000000844	SF3A1	100	99.223	Panthera_tigris_altaica
ENSHGLG00100013799	SF3A1	100	98.865	ENSPTRG00000014240	SF3A1	100	98.865	Pan_troglodytes
ENSHGLG00100013799	SF3A1	100	98.991	ENSPANG00000020772	SF3A1	100	98.991	Papio_anubis
ENSHGLG00100013799	SF3A1	83	94.505	ENSPSIG00000012803	SF3A1	96	94.505	Pelodiscus_sinensis
ENSHGLG00100013799	SF3A1	96	84.293	ENSPMGG00000023096	sf3a1	100	84.293	Periophthalmus_magnuspinnatus
ENSHGLG00100013799	SF3A1	100	98.865	ENSPEMG00000009494	Sf3a1	100	98.865	Peromyscus_maniculatus_bairdii
ENSHGLG00100013799	SF3A1	69	77.858	ENSPMAG00000007139	-	90	79.511	Petromyzon_marinus
ENSHGLG00100013799	SF3A1	100	97.604	ENSPCIG00000022692	SF3A1	100	97.604	Phascolarctos_cinereus
ENSHGLG00100013799	SF3A1	100	75.126	ENSPFOG00000016768	sf3a1	93	78.776	Poecilia_formosa
ENSHGLG00100013799	SF3A1	100	83.417	ENSPLAG00000017268	sf3a1	99	83.590	Poecilia_latipinna
ENSHGLG00100013799	SF3A1	84	85.843	ENSPMEG00000019811	sf3a1	98	85.090	Poecilia_mexicana
ENSHGLG00100013799	SF3A1	100	83.543	ENSPREG00000010347	sf3a1	99	83.974	Poecilia_reticulata
ENSHGLG00100013799	SF3A1	100	98.991	ENSPPYG00000011707	SF3A1	100	98.991	Pongo_abelii
ENSHGLG00100013799	SF3A1	57	99.057	ENSPCAG00000003266	SF3A1	57	99.057	Procavia_capensis
ENSHGLG00100013799	SF3A1	100	98.991	ENSPCOG00000026630	SF3A1	100	98.991	Propithecus_coquereli
ENSHGLG00100013799	SF3A1	100	94.704	ENSPVAG00000017719	SF3A1	94	98.255	Pteropus_vampyrus
ENSHGLG00100013799	SF3A1	100	84.230	ENSPNYG00000018706	sf3a1	99	85.275	Pundamilia_nyererei
ENSHGLG00100013799	SF3A1	99	83.227	ENSPNAG00000003721	sf3a1	99	84.596	Pygocentrus_nattereri
ENSHGLG00100013799	SF3A1	100	98.613	ENSRNOG00000005218	Sf3a1	100	98.613	Rattus_norvegicus
ENSHGLG00100013799	SF3A1	100	99.117	ENSRBIG00000032167	SF3A1	100	99.117	Rhinopithecus_bieti
ENSHGLG00100013799	SF3A1	100	99.117	ENSRROG00000044908	SF3A1	100	99.117	Rhinopithecus_roxellana
ENSHGLG00100013799	SF3A1	97	94.961	ENSSBOG00000021960	SF3A1	100	99.114	Saimiri_boliviensis_boliviensis
ENSHGLG00100013799	SF3A1	97	95.213	ENSSHAG00000003666	SF3A1	98	95.213	Sarcophilus_harrisii
ENSHGLG00100013799	SF3A1	100	83.500	ENSSFOG00015004579	sf3a1	99	85.256	Scleropages_formosus
ENSHGLG00100013799	SF3A1	100	81.635	ENSSMAG00000004275	sf3a1	99	81.667	Scophthalmus_maximus
ENSHGLG00100013799	SF3A1	100	83.774	ENSSDUG00000022219	sf3a1	99	84.527	Seriola_dumerili
ENSHGLG00100013799	SF3A1	100	83.774	ENSSLDG00000012642	sf3a1	99	84.527	Seriola_lalandi_dorsalis
ENSHGLG00100013799	SF3A1	97	95.725	ENSSARG00000005960	SF3A1	100	95.725	Sorex_araneus
ENSHGLG00100013799	SF3A1	96	92.098	ENSSPUG00000018863	SF3A1	100	91.667	Sphenodon_punctatus
ENSHGLG00100013799	SF3A1	100	84.403	ENSSPAG00000011856	sf3a1	99	84.783	Stegastes_partitus
ENSHGLG00100013799	SF3A1	100	99.117	ENSSSCG00000010002	SF3A1	100	99.117	Sus_scrofa
ENSHGLG00100013799	SF3A1	95	93.931	ENSTGUG00000010547	SF3A1	99	93.385	Taeniopygia_guttata
ENSHGLG00100013799	SF3A1	100	81.509	ENSTRUG00000006118	sf3a1	97	82.222	Takifugu_rubripes
ENSHGLG00100013799	SF3A1	64	81.413	ENSTNIG00000005713	sf3a1	89	86.607	Tetraodon_nigroviridis
ENSHGLG00100013799	SF3A1	100	91.677	ENSTBEG00000012771	SF3A1	100	91.677	Tupaia_belangeri
ENSHGLG00100013799	SF3A1	100	98.866	ENSTTRG00000001535	SF3A1	100	98.866	Tursiops_truncatus
ENSHGLG00100013799	SF3A1	99	97.967	ENSUAMG00000006750	SF3A1	99	97.967	Ursus_americanus
ENSHGLG00100013799	SF3A1	99	98.087	ENSUMAG00000016665	SF3A1	99	98.087	Ursus_maritimus
ENSHGLG00100013799	SF3A1	100	98.991	ENSVVUG00000003075	SF3A1	100	98.991	Vulpes_vulpes
ENSHGLG00100013799	SF3A1	100	85.947	ENSXETG00000016144	sf3a1	100	85.445	Xenopus_tropicalis
ENSHGLG00100013799	SF3A1	100	82.767	ENSXCOG00000015653	sf3a1	99	83.077	Xiphophorus_couchianus
ENSHGLG00100013799	SF3A1	100	82.893	ENSXMAG00000002753	sf3a1	99	83.205	Xiphophorus_maculatus