EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100013879 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 11535 bases
Position: chrJH168664.1:1157921-1169455
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100018814	KH_1	PF00013.29	2e-07	1	1
ENSHGLP00100018812	KH_1	PF00013.29	2.3e-07	1	1
ENSHGLP00100018813	KH_1	PF00013.29	2.5e-07	1	1
ENSHGLP00100018812	zf-CCHC	PF00098.23	0.00013	1	1
ENSHGLP00100018814	zf-CCHC	PF00098.23	0.00014	1	1
ENSHGLP00100018813	zf-CCHC	PF00098.23	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100019008	-	1779	-	ENSHGLP00100018813	592 (aa)	-	-
ENSHGLT00100019009	-	1614	-	ENSHGLP00100018814	537 (aa)	-	-
ENSHGLT00100019007	-	1683	-	ENSHGLP00100018812	560 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100013879's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100013879's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100013879	-	80	89.252	ENSHGLG00100008076	-	86	86.916
ENSHGLG00100013879	-	90	81.526	ENSHGLG00100008255	-	92	88.222

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100013879	-	65	82.353	ENSAPOG00000012341	sf1	58	76.923	Acanthochromis_polyacanthus
ENSHGLG00100013879	-	87	98.864	ENSAMEG00000017828	SF1	75	98.864	Ailuropoda_melanoleuca
ENSHGLG00100013879	-	64	84.682	ENSACIG00000016514	sf1	61	78.780	Amphilophus_citrinellus
ENSHGLG00100013879	-	65	81.818	ENSAOCG00000010934	sf1	58	76.998	Amphiprion_ocellaris
ENSHGLG00100013879	-	65	81.818	ENSAPEG00000009498	sf1	58	76.998	Amphiprion_percula
ENSHGLG00100013879	-	65	82.086	ENSATEG00000001894	sf1	59	77.724	Anabas_testudineus
ENSHGLG00100013879	-	93	77.362	ENSANAG00000022607	-	88	89.041	Aotus_nancymaae
ENSHGLG00100013879	-	100	98.214	ENSANAG00000026664	-	98	98.214	Aotus_nancymaae
ENSHGLG00100013879	-	64	85.345	ENSACLG00000007633	sf1	61	79.562	Astatotilapia_calliptera
ENSHGLG00100013879	-	66	86.096	ENSAMXG00000003630	sf1	50	79.218	Astyanax_mexicanus
ENSHGLG00100013879	-	80	100.000	ENSBTAG00000001035	SF1	97	78.822	Bos_taurus
ENSHGLG00100013879	-	93	94.521	ENSCJAG00000002780	SF1	95	85.406	Callithrix_jacchus
ENSHGLG00100013879	-	99	88.226	ENSCAFG00000014239	SF1	95	85.406	Canis_familiaris
ENSHGLG00100013879	-	99	88.226	ENSCAFG00020014381	SF1	95	85.406	Canis_lupus_dingo
ENSHGLG00100013879	-	93	96.579	ENSCHIG00000025867	SF1	90	96.951	Capra_hircus
ENSHGLG00100013879	-	54	99.281	ENSTSYG00000033618	SF1	82	99.281	Carlito_syrichta
ENSHGLG00100013879	-	100	98.393	ENSCAPG00000010762	SF1	100	98.393	Cavia_aperea
ENSHGLG00100013879	-	93	96.177	ENSCPOG00000012290	SF1	92	96.545	Cavia_porcellus
ENSHGLG00100013879	-	80	84.753	ENSCCAG00000023781	-	83	87.354	Cebus_capucinus
ENSHGLG00100013879	-	93	94.521	ENSCCAG00000037881	SF1	93	100.000	Cebus_capucinus
ENSHGLG00100013879	-	99	88.226	ENSCATG00000011564	SF1	88	100.000	Cercocebus_atys
ENSHGLG00100013879	-	93	96.579	ENSCSAG00000007258	SF1	90	96.951	Chlorocebus_sabaeus
ENSHGLG00100013879	-	76	93.596	ENSCHOG00000006008	SF1	79	93.780	Choloepus_hoffmanni
ENSHGLG00100013879	-	80	88.785	ENSCPBG00000023763	SF1	57	86.130	Chrysemys_picta_bellii
ENSHGLG00100013879	-	65	59.946	ENSCING00000005564	-	74	60.372	Ciona_intestinalis
ENSHGLG00100013879	-	88	49.728	ENSCSAVG00000009055	-	88	55.014	Ciona_savignyi
ENSHGLG00100013879	-	99	88.226	ENSCANG00000042201	SF1	88	100.000	Colobus_angolensis_palliatus
ENSHGLG00100013879	-	100	97.500	ENSCGRG00001003677	Sf1	98	97.500	Cricetulus_griseus_chok1gshd
ENSHGLG00100013879	-	100	97.500	ENSCGRG00000001708	Sf1	100	97.500	Cricetulus_griseus_crigri
ENSHGLG00100013879	-	70	78.554	ENSCSEG00000014375	sf1	57	76.513	Cynoglossus_semilaevis
ENSHGLG00100013879	-	66	84.783	ENSCVAG00000001670	sf1	63	79.361	Cyprinodon_variegatus
ENSHGLG00100013879	-	69	80.867	ENSDARG00000008188	sf1	70	78.230	Danio_rerio
ENSHGLG00100013879	-	93	96.177	ENSDNOG00000001282	SF1	90	96.545	Dasypus_novemcinctus
ENSHGLG00100013879	-	99	88.060	ENSDORG00000016334	Sf1	95	85.240	Dipodomys_ordii
ENSHGLG00100013879	-	73	89.681	ENSETEG00000012830	SF1	62	86.130	Echinops_telfairi
ENSHGLG00100013879	-	93	96.177	ENSEASG00005018272	SF1	90	96.545	Equus_asinus_asinus
ENSHGLG00100013879	-	93	96.378	ENSECAG00000024544	SF1	90	96.748	Equus_caballus
ENSHGLG00100013879	-	73	99.237	ENSEEUG00000001058	SF1	100	99.237	Erinaceus_europaeus
ENSHGLG00100013879	-	65	81.720	ENSELUG00000013225	sf1	53	78.450	Esox_lucius
ENSHGLG00100013879	-	93	94.521	ENSFCAG00000012231	SF1	95	85.406	Felis_catus
ENSHGLG00100013879	-	100	99.286	ENSFDAG00000009833	SF1	100	99.286	Fukomys_damarensis
ENSHGLG00100013879	-	66	81.481	ENSFHEG00000022656	sf1	59	77.197	Fundulus_heteroclitus
ENSHGLG00100013879	-	56	88.308	ENSGMOG00000007469	sf1	59	88.308	Gadus_morhua
ENSHGLG00100013879	-	66	84.182	ENSGAFG00000019284	sf1	76	80.392	Gambusia_affinis
ENSHGLG00100013879	-	65	81.616	ENSGACG00000000826	sf1	66	76.355	Gasterosteus_aculeatus
ENSHGLG00100013879	-	80	88.785	ENSGAGG00000021691	SF1	59	88.785	Gopherus_agassizii
ENSHGLG00100013879	-	65	83.200	ENSHBUG00000011598	sf1	59	78.657	Haplochromis_burtoni
ENSHGLG00100013879	-	100	100.000	ENSHGLG00000009541	SF1	98	100.000	Heterocephalus_glaber_female
ENSHGLG00100013879	-	66	81.365	ENSHCOG00000011388	sf1	58	76.755	Hippocampus_comes
ENSHGLG00100013879	-	100	82.531	ENSSTOG00000024353	-	98	83.422	Ictidomys_tridecemlineatus
ENSHGLG00100013879	-	99	87.894	ENSSTOG00000009790	-	96	85.075	Ictidomys_tridecemlineatus
ENSHGLG00100013879	-	99	87.894	ENSJJAG00000011788	Sf1	95	85.075	Jaculus_jaculus
ENSHGLG00100013879	-	65	84.874	ENSKMAG00000005854	sf1	61	78.450	Kryptolebias_marmoratus
ENSHGLG00100013879	-	96	61.863	ENSLBEG00000019836	sf1	63	78.208	Labrus_bergylta
ENSHGLG00100013879	-	73	78.986	ENSLACG00000018493	SF1	73	79.024	Latimeria_chalumnae
ENSHGLG00100013879	-	66	84.840	ENSLOCG00000002130	sf1	58	79.753	Lepisosteus_oculatus
ENSHGLG00100013879	-	87	98.636	ENSLAFG00000007201	SF1	96	82.686	Loxodonta_africana
ENSHGLG00100013879	-	99	88.226	ENSMFAG00000033122	SF1	88	100.000	Macaca_fascicularis
ENSHGLG00100013879	-	93	96.579	ENSMMUG00000022606	SF1	99	99.506	Macaca_mulatta
ENSHGLG00100013879	-	92	97.154	ENSMNEG00000037901	SF1	88	100.000	Macaca_nemestrina
ENSHGLG00100013879	-	99	88.226	ENSMLEG00000040706	SF1	89	100.000	Mandrillus_leucophaeus
ENSHGLG00100013879	-	65	82.888	ENSMAMG00000001780	sf1	58	77.966	Mastacembelus_armatus
ENSHGLG00100013879	-	65	82.933	ENSMZEG00005009196	sf1	59	78.417	Maylandia_zebra
ENSHGLG00100013879	-	100	97.321	ENSMAUG00000014064	Sf1	98	97.321	Mesocricetus_auratus
ENSHGLG00100013879	-	93	94.521	ENSMICG00000001202	SF1	93	99.748	Microcebus_murinus
ENSHGLG00100013879	-	100	97.500	ENSMOCG00000022038	Sf1	98	97.500	Microtus_ochrogaster
ENSHGLG00100013879	-	65	82.016	ENSMMOG00000020474	sf1	59	76.601	Mola_mola
ENSHGLG00100013879	-	76	97.882	ENSMODG00000029407	SF1	92	97.882	Monodelphis_domestica
ENSHGLG00100013879	-	64	84.593	ENSMALG00000020521	sf1	67	76.812	Monopterus_albus
ENSHGLG00100013879	-	100	97.679	MGP_CAROLIEiJ_G0022607	Sf1	100	99.625	Mus_caroli
ENSHGLG00100013879	-	100	97.679	ENSMUSG00000024949	Sf1	100	99.625	Mus_musculus
ENSHGLG00100013879	-	100	97.679	MGP_PahariEiJ_G0014101	Sf1	100	99.625	Mus_pahari
ENSHGLG00100013879	-	100	97.679	MGP_SPRETEiJ_G0023518	Sf1	100	99.625	Mus_spretus
ENSHGLG00100013879	-	79	98.864	ENSMPUG00000012684	SF1	97	78.662	Mustela_putorius_furo
ENSHGLG00100013879	-	79	94.550	ENSMLUG00000029800	-	74	93.473	Myotis_lucifugus
ENSHGLG00100013879	-	79	98.864	ENSMLUG00000015217	-	97	78.662	Myotis_lucifugus
ENSHGLG00100013879	-	100	98.393	ENSNGAG00000005550	Sf1	98	98.393	Nannospalax_galili
ENSHGLG00100013879	-	64	85.345	ENSNBRG00000017606	sf1	60	79.562	Neolamprologus_brichardi
ENSHGLG00100013879	-	99	88.226	ENSNLEG00000005236	-	88	100.000	Nomascus_leucogenys
ENSHGLG00100013879	-	93	95.573	ENSMEUG00000013424	SF1	93	95.354	Notamacropus_eugenii
ENSHGLG00100013879	-	89	96.025	ENSOPRG00000005008	SF1	96	96.406	Ochotona_princeps
ENSHGLG00100013879	-	100	78.444	ENSODEG00000006102	-	98	78.444	Octodon_degus
ENSHGLG00100013879	-	65	83.200	ENSONIG00000015728	sf1	59	78.657	Oreochromis_niloticus
ENSHGLG00100013879	-	72	87.855	ENSOANG00000002909	SF1	95	87.597	Ornithorhynchus_anatinus
ENSHGLG00100013879	-	99	88.060	ENSOCUG00000026486	SF1	96	85.240	Oryctolagus_cuniculus
ENSHGLG00100013879	-	68	80.879	ENSORLG00000011853	sf1	58	76.998	Oryzias_latipes
ENSHGLG00100013879	-	68	80.879	ENSORLG00020011834	sf1	58	76.998	Oryzias_latipes_hni
ENSHGLG00100013879	-	66	80.688	ENSORLG00015012855	sf1	58	76.755	Oryzias_latipes_hsok
ENSHGLG00100013879	-	66	82.011	ENSOMEG00000005210	sf1	59	77.966	Oryzias_melastigma
ENSHGLG00100013879	-	99	88.206	ENSOGAG00000016196	SF1	95	85.382	Otolemur_garnettii
ENSHGLG00100013879	-	93	93.411	ENSOARG00000009166	SF1	92	91.082	Ovis_aries
ENSHGLG00100013879	-	99	84.692	ENSPPAG00000002799	-	95	100.000	Pan_paniscus
ENSHGLG00100013879	-	92	97.154	ENSPPRG00000013566	SF1	95	85.406	Panthera_pardus
ENSHGLG00100013879	-	100	90.536	ENSPTIG00000016141	SF1	98	89.399	Panthera_tigris_altaica
ENSHGLG00100013879	-	93	94.521	ENSPTRG00000003846	SF1	97	100.000	Pan_troglodytes
ENSHGLG00100013879	-	93	96.579	ENSPANG00000020754	SF1	88	100.000	Papio_anubis
ENSHGLG00100013879	-	61	79.580	ENSPKIG00000012116	sf1	88	74.499	Paramormyrops_kingsleyae
ENSHGLG00100013879	-	57	87.812	ENSPSIG00000003610	SF1	59	87.829	Pelodiscus_sinensis
ENSHGLG00100013879	-	100	98.214	ENSPEMG00000010463	Sf1	98	98.214	Peromyscus_maniculatus_bairdii
ENSHGLG00100013879	-	60	72.321	ENSPMAG00000008272	sf1	53	66.757	Petromyzon_marinus
ENSHGLG00100013879	-	99	85.880	ENSPCIG00000018173	SF1	94	86.711	Phascolarctos_cinereus
ENSHGLG00100013879	-	66	85.326	ENSPFOG00000013683	sf1	66	80.637	Poecilia_formosa
ENSHGLG00100013879	-	66	83.820	ENSPLAG00000018076	sf1	61	79.137	Poecilia_latipinna
ENSHGLG00100013879	-	66	83.820	ENSPMEG00000005726	sf1	62	79.376	Poecilia_mexicana
ENSHGLG00100013879	-	66	83.289	ENSPREG00000004155	sf1	59	78.657	Poecilia_reticulata
ENSHGLG00100013879	-	93	96.579	ENSPPYG00000003098	-	93	96.761	Pongo_abelii
ENSHGLG00100013879	-	93	94.129	ENSPCAG00000013631	SF1	73	96.545	Procavia_capensis
ENSHGLG00100013879	-	99	88.206	ENSPCOG00000027546	SF1	93	99.748	Propithecus_coquereli
ENSHGLG00100013879	-	93	94.129	ENSPVAG00000016938	SF1	74	96.545	Pteropus_vampyrus
ENSHGLG00100013879	-	65	82.933	ENSPNYG00000004673	sf1	59	78.417	Pundamilia_nyererei
ENSHGLG00100013879	-	65	87.252	ENSPNAG00000013072	sf1	59	79.805	Pygocentrus_nattereri
ENSHGLG00100013879	-	79	98.409	ENSRNOG00000021085	Sf1	80	96.259	Rattus_norvegicus
ENSHGLG00100013879	-	100	90.714	ENSRBIG00000042818	SF1	89	99.730	Rhinopithecus_bieti
ENSHGLG00100013879	-	100	98.393	ENSRROG00000045655	SF1	99	98.393	Rhinopithecus_roxellana
ENSHGLG00100013879	-	74	38.257	YLR116W	MSL5	61	43.182	Saccharomyces_cerevisiae
ENSHGLG00100013879	-	93	78.503	ENSSBOG00000022267	-	96	83.938	Saimiri_boliviensis_boliviensis
ENSHGLG00100013879	-	71	93.500	ENSSHAG00000006841	SF1	73	94.750	Sarcophilus_harrisii
ENSHGLG00100013879	-	70	80.653	ENSSFOG00015021978	sf1	55	76.998	Scleropages_formosus
ENSHGLG00100013879	-	72	76.247	ENSSMAG00000007549	sf1	62	76.667	Scophthalmus_maximus
ENSHGLG00100013879	-	65	81.283	ENSSDUG00000003903	sf1	61	77.240	Seriola_dumerili
ENSHGLG00100013879	-	65	81.283	ENSSLDG00000013075	sf1	59	77.240	Seriola_lalandi_dorsalis
ENSHGLG00100013879	-	93	92.169	ENSSARG00000008180	SF1	95	92.169	Sorex_araneus
ENSHGLG00100013879	-	80	85.268	ENSSPUG00000012907	SF1	74	84.821	Sphenodon_punctatus
ENSHGLG00100013879	-	65	81.818	ENSSPAG00000019060	sf1	58	76.998	Stegastes_partitus
ENSHGLG00100013879	-	93	96.378	ENSSSCG00000013021	SF1	90	96.748	Sus_scrofa
ENSHGLG00100013879	-	87	63.125	ENSTNIG00000004820	sf1	77	69.417	Tetraodon_nigroviridis
ENSHGLG00100013879	-	81	89.262	ENSTBEG00000013133	SF1	65	89.262	Tupaia_belangeri
ENSHGLG00100013879	-	80	94.626	ENSTTRG00000008857	SF1	80	94.651	Tursiops_truncatus
ENSHGLG00100013879	-	65	95.690	ENSUAMG00000011977	SF1	66	95.690	Ursus_americanus
ENSHGLG00100013879	-	100	89.464	ENSUMAG00000007268	SF1	98	89.464	Ursus_maritimus
ENSHGLG00100013879	-	61	100.000	ENSVPAG00000011912	SF1	64	100.000	Vicugna_pacos
ENSHGLG00100013879	-	93	96.579	ENSVVUG00000028585	SF1	90	96.951	Vulpes_vulpes
ENSHGLG00100013879	-	77	80.645	ENSXETG00000008434	sf1	67	81.863	Xenopus_tropicalis
ENSHGLG00100013879	-	65	85.205	ENSXCOG00000003704	sf1	75	80.941	Xiphophorus_couchianus
ENSHGLG00100013879	-	66	83.333	ENSXMAG00000007822	sf1	61	79.376	Xiphophorus_maculatus