EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100013902 (Gene tree)
Gene ID: -
Gene Symbol: CHD3
Alias: Mi-2a|Mi2-ALPHA|ZFH
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 23441 bases
Position: chrJH168588.1:809239-832679
Accession: 1918
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100018842	ResIII	PF04851.15	1.8e-08	1	1
ENSHGLP00100018841	ResIII	PF04851.15	1.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100019039	CHD3-202	5043	-	ENSHGLP00100018842	1680 (aa)	-	-
ENSHGLT00100019038	CHD3-201	5145	-	ENSHGLP00100018841	1714 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100013902's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100013902's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100013902	CHD3	88	66.026	ENSHGLG00100007450	-	84	64.449
ENSHGLG00100013902	CHD3	92	58.207	ENSHGLG00100013261	CHD5	81	60.535

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100013902	CHD3	99	91.594	ENSG00000170004	CHD3	99	94.697	Homo_sapiens
ENSHGLG00100013902	CHD3	76	86.992	ENSAPOG00000005614	chd3	79	86.992	Acanthochromis_polyacanthus
ENSHGLG00100013902	CHD3	66	89.377	ENSAMEG00000003025	-	86	89.377	Ailuropoda_melanoleuca
ENSHGLG00100013902	CHD3	79	77.936	ENSACIG00000019671	chd3	83	87.705	Amphilophus_citrinellus
ENSHGLG00100013902	CHD3	93	85.000	ENSAOCG00000023784	chd3	81	86.585	Amphiprion_ocellaris
ENSHGLG00100013902	CHD3	93	85.000	ENSAPEG00000006341	chd3	86	79.239	Amphiprion_percula
ENSHGLG00100013902	CHD3	93	84.556	ENSATEG00000000848	chd3	79	86.640	Anabas_testudineus
ENSHGLG00100013902	CHD3	98	78.225	ENSACAG00000004276	CHD3	85	78.532	Anolis_carolinensis
ENSHGLG00100013902	CHD3	99	91.739	ENSANAG00000034323	CHD3	90	91.739	Aotus_nancymaae
ENSHGLG00100013902	CHD3	90	84.190	ENSACLG00000009222	chd3	89	67.982	Astatotilapia_calliptera
ENSHGLG00100013902	CHD3	99	90.883	ENSBTAG00000014377	CHD3	87	90.644	Bos_taurus
ENSHGLG00100013902	CHD3	99	91.594	ENSCJAG00000014766	CHD3	88	91.594	Callithrix_jacchus
ENSHGLG00100013902	CHD3	99	91.014	ENSCAFG00000016859	CHD3	88	91.014	Canis_familiaris
ENSHGLG00100013902	CHD3	95	91.014	ENSCAFG00020007422	CHD3	89	91.014	Canis_lupus_dingo
ENSHGLG00100013902	CHD3	99	91.014	ENSCHIG00000016737	CHD3	89	91.014	Capra_hircus
ENSHGLG00100013902	CHD3	99	90.870	ENSTSYG00000035658	CHD3	88	90.870	Carlito_syrichta
ENSHGLG00100013902	CHD3	97	91.159	ENSCAPG00000014864	CHD3	88	91.159	Cavia_aperea
ENSHGLG00100013902	CHD3	99	91.014	ENSCPOG00000022653	CHD3	88	91.014	Cavia_porcellus
ENSHGLG00100013902	CHD3	99	91.159	ENSCCAG00000034792	CHD3	88	91.159	Cebus_capucinus
ENSHGLG00100013902	CHD3	99	91.014	ENSCATG00000041717	CHD3	88	91.014	Cercocebus_atys
ENSHGLG00100013902	CHD3	99	92.174	ENSCLAG00000010523	CHD3	89	92.174	Chinchilla_lanigera
ENSHGLG00100013902	CHD3	99	91.159	ENSCSAG00000011122	CHD3	89	91.159	Chlorocebus_sabaeus
ENSHGLG00100013902	CHD3	77	97.561	ENSCPBG00000011966	CHD3	80	97.561	Chrysemys_picta_bellii
ENSHGLG00100013902	CHD3	99	90.870	ENSCANG00000037641	CHD3	88	90.870	Colobus_angolensis_palliatus
ENSHGLG00100013902	CHD3	99	89.634	ENSCGRG00001011306	Chd3	89	89.634	Cricetulus_griseus_chok1gshd
ENSHGLG00100013902	CHD3	94	98.473	ENSCGRG00000007878	Chd3	87	98.473	Cricetulus_griseus_crigri
ENSHGLG00100013902	CHD3	91	82.449	ENSCSEG00000004489	chd3	88	84.490	Cynoglossus_semilaevis
ENSHGLG00100013902	CHD3	86	77.612	ENSCVAG00000007293	chd3	84	77.612	Cyprinodon_variegatus
ENSHGLG00100013902	CHD3	87	86.567	ENSDARG00000021405	chd3	88	69.559	Danio_rerio
ENSHGLG00100013902	CHD3	99	91.754	ENSDNOG00000047846	CHD3	87	91.754	Dasypus_novemcinctus
ENSHGLG00100013902	CHD3	99	89.565	ENSDORG00000010713	Chd3	89	90.485	Dipodomys_ordii
ENSHGLG00100013902	CHD3	95	89.692	ENSETEG00000017733	CHD3	88	89.692	Echinops_telfairi
ENSHGLG00100013902	CHD3	74	64.264	ENSEBUG00000008310	chd3	86	65.639	Eptatretus_burgeri
ENSHGLG00100013902	CHD3	92	91.014	ENSEASG00005019360	CHD3	89	91.014	Equus_asinus_asinus
ENSHGLG00100013902	CHD3	92	91.159	ENSECAG00000010051	CHD3	89	91.159	Equus_caballus
ENSHGLG00100013902	CHD3	91	94.915	ENSEEUG00000015205	CHD3	80	96.396	Erinaceus_europaeus
ENSHGLG00100013902	CHD3	76	91.753	ENSELUG00000019499	chd3	83	91.753	Esox_lucius
ENSHGLG00100013902	CHD3	99	90.725	ENSFCAG00000009629	CHD3	85	90.725	Felis_catus
ENSHGLG00100013902	CHD3	99	93.043	ENSFDAG00000008220	CHD3	88	93.043	Fukomys_damarensis
ENSHGLG00100013902	CHD3	89	83.012	ENSGMOG00000013599	chd3	80	83.265	Gadus_morhua
ENSHGLG00100013902	CHD3	61	63.788	ENSGAFG00000004055	chd3	86	66.413	Gambusia_affinis
ENSHGLG00100013902	CHD3	99	65.401	ENSGACG00000019275	chd3	89	65.280	Gasterosteus_aculeatus
ENSHGLG00100013902	CHD3	68	95.980	ENSGAGG00000013164	CHD3	79	95.980	Gopherus_agassizii
ENSHGLG00100013902	CHD3	99	91.449	ENSGGOG00000013496	CHD3	88	91.449	Gorilla_gorilla
ENSHGLG00100013902	CHD3	99	93.913	ENSHGLG00000012017	CHD3	88	93.913	Heterocephalus_glaber_female
ENSHGLG00100013902	CHD3	94	63.839	ENSHCOG00000010170	chd3	86	65.405	Hippocampus_comes
ENSHGLG00100013902	CHD3	82	87.938	ENSIPUG00000003271	chd3	84	68.290	Ictalurus_punctatus
ENSHGLG00100013902	CHD3	99	90.870	ENSSTOG00000025907	CHD3	89	90.870	Ictidomys_tridecemlineatus
ENSHGLG00100013902	CHD3	99	89.787	ENSJJAG00000017633	Chd3	89	89.787	Jaculus_jaculus
ENSHGLG00100013902	CHD3	88	83.333	ENSKMAG00000019292	chd3	86	67.732	Kryptolebias_marmoratus
ENSHGLG00100013902	CHD3	88	78.400	ENSLBEG00000028485	chd3	82	78.862	Labrus_bergylta
ENSHGLG00100013902	CHD3	96	71.038	ENSLACG00000008031	CHD3	85	71.494	Latimeria_chalumnae
ENSHGLG00100013902	CHD3	98	70.775	ENSLOCG00000013965	chd3	86	72.895	Lepisosteus_oculatus
ENSHGLG00100013902	CHD3	89	92.035	ENSLAFG00000000572	CHD3	89	89.967	Loxodonta_africana
ENSHGLG00100013902	CHD3	99	91.014	ENSMFAG00000020113	CHD3	88	91.014	Macaca_fascicularis
ENSHGLG00100013902	CHD3	99	89.730	ENSMMUG00000022221	CHD3	88	90.668	Macaca_mulatta
ENSHGLG00100013902	CHD3	99	90.870	ENSMNEG00000001728	CHD3	88	90.870	Macaca_nemestrina
ENSHGLG00100013902	CHD3	99	91.014	ENSMLEG00000032249	CHD3	88	91.014	Mandrillus_leucophaeus
ENSHGLG00100013902	CHD3	83	70.270	ENSMAMG00000000564	chd3	83	70.270	Mastacembelus_armatus
ENSHGLG00100013902	CHD3	99	89.787	ENSMAUG00000013873	Chd3	89	87.370	Mesocricetus_auratus
ENSHGLG00100013902	CHD3	99	91.014	ENSMICG00000008741	CHD3	88	90.883	Microcebus_murinus
ENSHGLG00100013902	CHD3	99	89.787	ENSMOCG00000004848	Chd3	89	89.787	Microtus_ochrogaster
ENSHGLG00100013902	CHD3	95	67.405	ENSMMOG00000012699	chd3	88	68.211	Mola_mola
ENSHGLG00100013902	CHD3	92	85.261	ENSMODG00000007509	CHD3	88	85.625	Monodelphis_domestica
ENSHGLG00100013902	CHD3	99	88.754	MGP_CAROLIEiJ_G0016564	Chd3	89	89.184	Mus_caroli
ENSHGLG00100013902	CHD3	99	89.362	ENSMUSG00000018474	Chd3	89	89.286	Mus_musculus
ENSHGLG00100013902	CHD3	99	89.514	MGP_PahariEiJ_G0017695	Chd3	89	89.448	Mus_pahari
ENSHGLG00100013902	CHD3	99	89.514	MGP_SPRETEiJ_G0017400	Chd3	89	89.448	Mus_spretus
ENSHGLG00100013902	CHD3	86	91.462	ENSMPUG00000008861	CHD3	88	91.462	Mustela_putorius_furo
ENSHGLG00100013902	CHD3	99	90.159	ENSMLUG00000014643	-	88	90.159	Myotis_lucifugus
ENSHGLG00100013902	CHD3	99	90.145	ENSNGAG00000000773	Chd3	87	90.393	Nannospalax_galili
ENSHGLG00100013902	CHD3	83	71.130	ENSNBRG00000000636	chd3	81	71.250	Neolamprologus_brichardi
ENSHGLG00100013902	CHD3	97	89.099	ENSNLEG00000009770	CHD3	89	90.027	Nomascus_leucogenys
ENSHGLG00100013902	CHD3	84	99.474	ENSMEUG00000005852	CHD3	77	99.474	Notamacropus_eugenii
ENSHGLG00100013902	CHD3	94	88.737	ENSOPRG00000011069	CHD3	89	89.741	Ochotona_princeps
ENSHGLG00100013902	CHD3	99	91.594	ENSODEG00000017785	CHD3	88	91.594	Octodon_degus
ENSHGLG00100013902	CHD3	91	84.436	ENSONIG00000009292	chd3	89	66.972	Oreochromis_niloticus
ENSHGLG00100013902	CHD3	99	88.889	ENSOCUG00000029299	CHD3	89	89.639	Oryctolagus_cuniculus
ENSHGLG00100013902	CHD3	82	64.583	ENSORLG00000007107	chd3	80	64.583	Oryzias_latipes
ENSHGLG00100013902	CHD3	61	63.435	ENSORLG00020008387	chd3	86	64.862	Oryzias_latipes_hni
ENSHGLG00100013902	CHD3	70	86.561	ENSOMEG00000013691	chd3	83	73.629	Oryzias_melastigma
ENSHGLG00100013902	CHD3	99	91.159	ENSOGAG00000003216	CHD3	89	91.159	Otolemur_garnettii
ENSHGLG00100013902	CHD3	99	89.899	ENSOARG00000017855	CHD3	88	89.899	Ovis_aries
ENSHGLG00100013902	CHD3	99	89.189	ENSPPAG00000032886	CHD3	88	90.119	Pan_paniscus
ENSHGLG00100013902	CHD3	99	91.014	ENSPPRG00000000626	CHD3	88	91.014	Panthera_pardus
ENSHGLG00100013902	CHD3	99	91.739	ENSPTRG00000008714	CHD3	88	91.739	Pan_troglodytes
ENSHGLG00100013902	CHD3	99	91.014	ENSPANG00000023938	CHD3	88	91.014	Papio_anubis
ENSHGLG00100013902	CHD3	94	71.759	ENSPKIG00000006305	chd3	88	73.494	Paramormyrops_kingsleyae
ENSHGLG00100013902	CHD3	52	94.000	ENSPSIG00000010177	CHD3	79	94.000	Pelodiscus_sinensis
ENSHGLG00100013902	CHD3	99	89.275	ENSPEMG00000014262	Chd3	89	89.296	Peromyscus_maniculatus_bairdii
ENSHGLG00100013902	CHD3	99	86.709	ENSPCIG00000005442	CHD3	85	97.984	Phascolarctos_cinereus
ENSHGLG00100013902	CHD3	95	83.012	ENSPFOG00000012464	chd3	81	80.070	Poecilia_formosa
ENSHGLG00100013902	CHD3	86	76.190	ENSPLAG00000002887	chd3	84	78.102	Poecilia_latipinna
ENSHGLG00100013902	CHD3	57	69.914	ENSPMEG00000016725	chd3	85	64.253	Poecilia_mexicana
ENSHGLG00100013902	CHD3	89	86.957	ENSPREG00000011044	chd3	88	81.720	Poecilia_reticulata
ENSHGLG00100013902	CHD3	98	87.826	ENSPPYG00000007940	CHD3	87	87.826	Pongo_abelii
ENSHGLG00100013902	CHD3	95	92.844	ENSPCAG00000004350	CHD3	86	92.844	Procavia_capensis
ENSHGLG00100013902	CHD3	99	91.159	ENSPCOG00000020952	CHD3	88	91.027	Propithecus_coquereli
ENSHGLG00100013902	CHD3	96	90.715	ENSPVAG00000016344	CHD3	87	90.715	Pteropus_vampyrus
ENSHGLG00100013902	CHD3	95	82.014	ENSPNAG00000020393	chd3	86	80.357	Pygocentrus_nattereri
ENSHGLG00100013902	CHD3	92	89.451	ENSRNOG00000009722	Chd3	89	89.451	Rattus_norvegicus
ENSHGLG00100013902	CHD3	99	87.140	ENSRBIG00000033562	CHD3	88	88.037	Rhinopithecus_bieti
ENSHGLG00100013902	CHD3	99	91.006	ENSRROG00000029554	CHD3	90	90.668	Rhinopithecus_roxellana
ENSHGLG00100013902	CHD3	99	91.739	ENSSBOG00000020719	CHD3	88	91.739	Saimiri_boliviensis_boliviensis
ENSHGLG00100013902	CHD3	99	86.811	ENSSHAG00000014412	CHD3	89	87.293	Sarcophilus_harrisii
ENSHGLG00100013902	CHD3	86	72.213	ENSSFOG00015023123	chd3	85	67.416	Scleropages_formosus
ENSHGLG00100013902	CHD3	84	84.615	ENSSMAG00000006451	chd3	78	86.885	Scophthalmus_maximus
ENSHGLG00100013902	CHD3	61	63.594	ENSSDUG00000005792	chd3	89	65.326	Seriola_dumerili
ENSHGLG00100013902	CHD3	91	85.000	ENSSPAG00000013694	chd3	82	78.472	Stegastes_partitus
ENSHGLG00100013902	CHD3	99	90.593	ENSSSCG00000021363	CHD3	84	96.230	Sus_scrofa
ENSHGLG00100013902	CHD3	76	83.643	ENSTRUG00000014990	chd3	76	83.529	Takifugu_rubripes
ENSHGLG00100013902	CHD3	98	67.540	ENSTNIG00000012998	chd3	89	66.617	Tetraodon_nigroviridis
ENSHGLG00100013902	CHD3	69	100.000	ENSTBEG00000011454	-	67	100.000	Tupaia_belangeri
ENSHGLG00100013902	CHD3	98	93.182	ENSTTRG00000010295	CHD3	86	92.790	Tursiops_truncatus
ENSHGLG00100013902	CHD3	91	91.304	ENSUAMG00000005475	CHD3	88	91.304	Ursus_americanus
ENSHGLG00100013902	CHD3	59	100.000	ENSVPAG00000010794	-	58	100.000	Vicugna_pacos
ENSHGLG00100013902	CHD3	95	91.014	ENSVVUG00000028011	CHD3	88	91.014	Vulpes_vulpes
ENSHGLG00100013902	CHD3	97	68.267	ENSXETG00000012991	chd3	81	70.482	Xenopus_tropicalis
ENSHGLG00100013902	CHD3	55	70.581	ENSXCOG00000000809	chd3	83	71.742	Xiphophorus_couchianus
ENSHGLG00100013902	CHD3	79	85.366	ENSXMAG00000016035	chd3	83	85.366	Xiphophorus_maculatus