EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100014028 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 128268 bases
Position: chrJH173192.1:379476-507743
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100019017	RRM_1	PF00076.22	6e-37	1	3
ENSHGLP00100019017	RRM_1	PF00076.22	6e-37	2	3
ENSHGLP00100019017	RRM_1	PF00076.22	6e-37	3	3
ENSHGLP00100019015	RRM_1	PF00076.22	1.1e-36	1	3
ENSHGLP00100019015	RRM_1	PF00076.22	1.1e-36	2	3
ENSHGLP00100019015	RRM_1	PF00076.22	1.1e-36	3	3
ENSHGLP00100019016	RRM_1	PF00076.22	5.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100019213	-	1996	-	ENSHGLP00100019015	584 (aa)	-	UPI00034F412F
ENSHGLT00100019215	-	1551	-	ENSHGLP00100019017	516 (aa)	-	-
ENSHGLT00100019214	-	4400	-	ENSHGLP00100019016	158 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100014028's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100014028's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100014028	-	99	91.720	ENSHGLG00100003071	-	100	88.718
ENSHGLG00100014028	-	84	75.000	ENSHGLG00100012752	-	64	70.667
ENSHGLG00100014028	-	88	55.000	ENSHGLG00100009598	-	84	44.519
ENSHGLG00100014028	-	84	71.212	ENSHGLG00100018987	-	58	61.279
ENSHGLG00100014028	-	88	53.571	ENSHGLG00100000255	-	71	40.802
ENSHGLG00100014028	-	89	68.085	ENSHGLG00100000518	A1CF	75	57.301
ENSHGLG00100014028	-	84	67.424	ENSHGLG00100004977	-	58	63.851
ENSHGLG00100014028	-	88	59.859	ENSHGLG00100008473	-	71	45.175
ENSHGLG00100014028	-	88	56.338	ENSHGLG00100013302	SYNCRIP	79	45.638

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100014028	-	100	96.203	ENSG00000163694	RBM47	100	96.203	Homo_sapiens
ENSHGLG00100014028	-	100	80.000	ENSAPOG00000011062	rbm47	100	82.493	Acanthochromis_polyacanthus
ENSHGLG00100014028	-	100	94.304	ENSAMEG00000009672	RBM47	100	92.605	Ailuropoda_melanoleuca
ENSHGLG00100014028	-	100	83.024	ENSACIG00000011531	rbm47	100	83.024	Amphilophus_citrinellus
ENSHGLG00100014028	-	100	80.203	ENSAOCG00000022245	rbm47	100	82.493	Amphiprion_ocellaris
ENSHGLG00100014028	-	100	80.203	ENSAPEG00000018304	rbm47	100	82.493	Amphiprion_percula
ENSHGLG00100014028	-	100	76.744	ENSATEG00000018400	rbm47	100	80.977	Anabas_testudineus
ENSHGLG00100014028	-	100	88.608	ENSAPLG00000013974	RBM47	100	85.980	Anas_platyrhynchos
ENSHGLG00100014028	-	100	83.306	ENSACAG00000011833	RBM47	100	83.472	Anolis_carolinensis
ENSHGLG00100014028	-	100	96.203	ENSANAG00000029440	RBM47	100	93.717	Aotus_nancymaae
ENSHGLG00100014028	-	100	81.912	ENSACLG00000016902	rbm47	100	81.912	Astatotilapia_calliptera
ENSHGLG00100014028	-	100	75.882	ENSAMXG00000021794	rbm47	100	80.000	Astyanax_mexicanus
ENSHGLG00100014028	-	100	95.570	ENSBTAG00000002356	RBM47	100	95.270	Bos_taurus
ENSHGLG00100014028	-	100	94.937	ENSCJAG00000019385	RBM47	100	93.455	Callithrix_jacchus
ENSHGLG00100014028	-	96	92.430	ENSCAFG00000015898	RBM47	100	91.047	Canis_familiaris
ENSHGLG00100014028	-	86	93.382	ENSCAFG00020010558	RBM47	94	91.236	Canis_lupus_dingo
ENSHGLG00100014028	-	100	96.203	ENSCHIG00000026214	RBM47	100	95.608	Capra_hircus
ENSHGLG00100014028	-	78	88.318	ENSTSYG00000033612	RBM47	94	85.981	Carlito_syrichta
ENSHGLG00100014028	-	100	93.243	ENSCAPG00000008426	RBM47	100	91.216	Cavia_aperea
ENSHGLG00100014028	-	100	96.835	ENSCPOG00000014100	RBM47	100	95.946	Cavia_porcellus
ENSHGLG00100014028	-	99	65.651	ENSCCAG00000024397	-	99	64.975	Cebus_capucinus
ENSHGLG00100014028	-	100	96.203	ENSCCAG00000030129	-	100	94.241	Cebus_capucinus
ENSHGLG00100014028	-	100	96.203	ENSCATG00000042064	RBM47	100	94.241	Cercocebus_atys
ENSHGLG00100014028	-	100	97.279	ENSCLAG00000001684	RBM47	100	95.785	Chinchilla_lanigera
ENSHGLG00100014028	-	100	96.203	ENSCSAG00000017060	RBM47	100	93.266	Chlorocebus_sabaeus
ENSHGLG00100014028	-	100	93.082	ENSCHOG00000011731	RBM47	88	88.488	Choloepus_hoffmanni
ENSHGLG00100014028	-	100	90.426	ENSCPBG00000013831	RBM47	100	88.423	Chrysemys_picta_bellii
ENSHGLG00100014028	-	100	96.203	ENSCANG00000019997	RBM47	100	94.241	Colobus_angolensis_palliatus
ENSHGLG00100014028	-	100	87.763	ENSCGRG00001020102	-	99	88.564	Cricetulus_griseus_chok1gshd
ENSHGLG00100014028	-	100	93.038	ENSCGRG00001000623	-	100	90.756	Cricetulus_griseus_chok1gshd
ENSHGLG00100014028	-	100	87.380	ENSCGRG00000014760	-	99	88.032	Cricetulus_griseus_crigri
ENSHGLG00100014028	-	100	93.038	ENSCGRG00000007762	-	100	93.038	Cricetulus_griseus_crigri
ENSHGLG00100014028	-	100	78.481	ENSCSEG00000004545	rbm47	100	74.707	Cynoglossus_semilaevis
ENSHGLG00100014028	-	100	78.517	ENSCVAG00000020144	rbm47	100	80.563	Cyprinodon_variegatus
ENSHGLG00100014028	-	100	77.059	ENSDARG00000061985	rbm47	100	80.000	Danio_rerio
ENSHGLG00100014028	-	100	94.937	ENSDNOG00000046854	RBM47	100	92.542	Dasypus_novemcinctus
ENSHGLG00100014028	-	100	94.937	ENSDORG00000010144	Rbm47	100	92.462	Dipodomys_ordii
ENSHGLG00100014028	-	97	93.276	ENSETEG00000009194	RBM47	100	91.779	Echinops_telfairi
ENSHGLG00100014028	-	100	66.456	ENSEBUG00000011912	rbm47	99	69.681	Eptatretus_burgeri
ENSHGLG00100014028	-	100	95.270	ENSEASG00005008443	RBM47	100	95.270	Equus_asinus_asinus
ENSHGLG00100014028	-	100	95.270	ENSECAG00000004400	RBM47	100	95.270	Equus_caballus
ENSHGLG00100014028	-	100	91.824	ENSEEUG00000001194	RBM47	75	92.641	Erinaceus_europaeus
ENSHGLG00100014028	-	100	80.556	ENSELUG00000006148	rbm47	100	79.404	Esox_lucius
ENSHGLG00100014028	-	100	95.570	ENSFCAG00000012399	RBM47	100	93.729	Felis_catus
ENSHGLG00100014028	-	100	87.975	ENSFALG00000002861	RBM47	100	87.899	Ficedula_albicollis
ENSHGLG00100014028	-	100	95.093	ENSFDAG00000016326	RBM47	100	95.093	Fukomys_damarensis
ENSHGLG00100014028	-	100	79.747	ENSFHEG00000007938	rbm47	100	75.126	Fundulus_heteroclitus
ENSHGLG00100014028	-	100	80.000	ENSGMOG00000014802	rbm47	100	73.333	Gadus_morhua
ENSHGLG00100014028	-	100	87.975	ENSGALG00000014267	RBM47	100	89.655	Gallus_gallus
ENSHGLG00100014028	-	100	79.747	ENSGAFG00000020571	rbm47	98	81.333	Gambusia_affinis
ENSHGLG00100014028	-	100	79.284	ENSGACG00000016223	rbm47	100	79.284	Gasterosteus_aculeatus
ENSHGLG00100014028	-	100	90.426	ENSGAGG00000020051	RBM47	100	88.591	Gopherus_agassizii
ENSHGLG00100014028	-	100	96.203	ENSGGOG00000001367	RBM47	100	94.241	Gorilla_gorilla
ENSHGLG00100014028	-	100	81.912	ENSHBUG00000003520	rbm47	100	81.912	Haplochromis_burtoni
ENSHGLG00100014028	-	100	100.000	ENSHGLG00000016914	RBM47	100	100.000	Heterocephalus_glaber_female
ENSHGLG00100014028	-	100	80.625	ENSHCOG00000002074	rbm47	99	82.804	Hippocampus_comes
ENSHGLG00100014028	-	100	79.587	ENSIPUG00000004743	rbm47	100	81.067	Ictalurus_punctatus
ENSHGLG00100014028	-	100	94.304	ENSSTOG00000004727	RBM47	100	94.304	Ictidomys_tridecemlineatus
ENSHGLG00100014028	-	100	91.933	ENSJJAG00000013823	Rbm47	100	91.933	Jaculus_jaculus
ENSHGLG00100014028	-	100	82.322	ENSKMAG00000000084	rbm47	100	78.500	Kryptolebias_marmoratus
ENSHGLG00100014028	-	100	80.000	ENSLBEG00000008436	rbm47	100	78.934	Labrus_bergylta
ENSHGLG00100014028	-	100	86.076	ENSLACG00000007196	RBM47	100	81.987	Latimeria_chalumnae
ENSHGLG00100014028	-	100	85.443	ENSLOCG00000012966	rbm47	95	79.293	Lepisosteus_oculatus
ENSHGLG00100014028	-	100	94.304	ENSLAFG00000011998	RBM47	100	92.088	Loxodonta_africana
ENSHGLG00100014028	-	100	96.203	ENSMFAG00000037967	RBM47	100	94.241	Macaca_fascicularis
ENSHGLG00100014028	-	100	96.203	ENSMMUG00000012036	RBM47	100	93.782	Macaca_mulatta
ENSHGLG00100014028	-	100	96.203	ENSMNEG00000040774	RBM47	100	94.241	Macaca_nemestrina
ENSHGLG00100014028	-	100	96.203	ENSMLEG00000041432	RBM47	100	95.873	Mandrillus_leucophaeus
ENSHGLG00100014028	-	100	78.363	ENSMAMG00000019143	rbm47	100	81.959	Mastacembelus_armatus
ENSHGLG00100014028	-	100	81.912	ENSMZEG00005023659	rbm47	100	81.912	Maylandia_zebra
ENSHGLG00100014028	-	100	88.608	ENSMGAG00000012226	RBM47	100	87.625	Meleagris_gallopavo
ENSHGLG00100014028	-	100	93.038	ENSMAUG00000006493	Rbm47	100	93.038	Mesocricetus_auratus
ENSHGLG00100014028	-	100	87.288	ENSMICG00000026417	RBM47	100	88.644	Microcebus_murinus
ENSHGLG00100014028	-	100	93.671	ENSMOCG00000021170	Rbm47	100	93.671	Microtus_ochrogaster
ENSHGLG00100014028	-	100	80.670	ENSMMOG00000007260	rbm47	100	80.670	Mola_mola
ENSHGLG00100014028	-	87	82.517	ENSMODG00000015426	-	99	79.811	Monodelphis_domestica
ENSHGLG00100014028	-	100	89.241	ENSMODG00000007003	RBM47	100	88.682	Monodelphis_domestica
ENSHGLG00100014028	-	100	84.177	ENSMODG00000020561	-	100	79.153	Monodelphis_domestica
ENSHGLG00100014028	-	100	79.337	ENSMALG00000005167	rbm47	100	82.667	Monopterus_albus
ENSHGLG00100014028	-	100	92.399	MGP_CAROLIEiJ_G0027258	Rbm47	100	91.772	Mus_caroli
ENSHGLG00100014028	-	100	92.736	ENSMUSG00000070780	Rbm47	100	92.061	Mus_musculus
ENSHGLG00100014028	-	100	92.736	MGP_PahariEiJ_G0017040	Rbm47	100	92.405	Mus_pahari
ENSHGLG00100014028	-	100	92.712	MGP_SPRETEiJ_G0028253	Rbm47	100	92.203	Mus_spretus
ENSHGLG00100014028	-	100	95.570	ENSMPUG00000006177	RBM47	94	95.101	Mustela_putorius_furo
ENSHGLG00100014028	-	100	93.671	ENSMLUG00000000889	RBM47	100	91.032	Myotis_lucifugus
ENSHGLG00100014028	-	100	97.468	ENSNGAG00000003325	Rbm47	100	92.256	Nannospalax_galili
ENSHGLG00100014028	-	100	82.171	ENSNBRG00000015092	rbm47	100	82.171	Neolamprologus_brichardi
ENSHGLG00100014028	-	100	96.203	ENSNLEG00000017151	RBM47	100	94.241	Nomascus_leucogenys
ENSHGLG00100014028	-	89	92.908	ENSMEUG00000009516	-	99	85.480	Notamacropus_eugenii
ENSHGLG00100014028	-	85	94.191	ENSOPRG00000016507	-	75	94.191	Ochotona_princeps
ENSHGLG00100014028	-	100	96.599	ENSODEG00000004873	RBM47	100	95.770	Octodon_degus
ENSHGLG00100014028	-	100	80.513	ENSONIG00000009061	rbm47	100	80.769	Oreochromis_niloticus
ENSHGLG00100014028	-	100	85.042	ENSOANG00000008978	RBM47	100	85.714	Ornithorhynchus_anatinus
ENSHGLG00100014028	-	100	93.909	ENSOCUG00000012034	RBM47	100	93.909	Oryctolagus_cuniculus
ENSHGLG00100014028	-	100	82.447	ENSORLG00000005847	rbm47	100	82.447	Oryzias_latipes
ENSHGLG00100014028	-	100	82.447	ENSORLG00020005154	rbm47	100	82.447	Oryzias_latipes_hni
ENSHGLG00100014028	-	100	82.713	ENSORLG00015000066	rbm47	100	82.713	Oryzias_latipes_hsok
ENSHGLG00100014028	-	100	82.400	ENSOMEG00000010730	rbm47	100	82.400	Oryzias_melastigma
ENSHGLG00100014028	-	100	87.975	ENSOGAG00000025193	-	100	85.908	Otolemur_garnettii
ENSHGLG00100014028	-	100	96.203	ENSOGAG00000029367	-	100	95.439	Otolemur_garnettii
ENSHGLG00100014028	-	100	87.119	ENSOARG00000012711	RBM47	100	86.780	Ovis_aries
ENSHGLG00100014028	-	100	96.203	ENSPPAG00000029763	RBM47	100	93.390	Pan_paniscus
ENSHGLG00100014028	-	100	95.570	ENSPPRG00000012873	RBM47	100	93.211	Panthera_pardus
ENSHGLG00100014028	-	85	91.000	ENSPTIG00000017046	RBM47	100	90.800	Panthera_tigris_altaica
ENSHGLG00100014028	-	100	96.203	ENSPTRG00000016006	RBM47	100	94.241	Pan_troglodytes
ENSHGLG00100014028	-	100	96.203	ENSPANG00000005980	RBM47	100	94.241	Papio_anubis
ENSHGLG00100014028	-	90	84.507	ENSPKIG00000005037	rbm47	100	80.418	Paramormyrops_kingsleyae
ENSHGLG00100014028	-	100	76.923	ENSPKIG00000013431	RBM47	98	80.720	Paramormyrops_kingsleyae
ENSHGLG00100014028	-	100	89.241	ENSPSIG00000017516	RBM47	97	89.583	Pelodiscus_sinensis
ENSHGLG00100014028	-	100	79.747	ENSPMGG00000018540	rbm47	100	82.667	Periophthalmus_magnuspinnatus
ENSHGLG00100014028	-	100	93.671	ENSPEMG00000011088	Rbm47	100	92.167	Peromyscus_maniculatus_bairdii
ENSHGLG00100014028	-	100	77.889	ENSPFOG00000007997	rbm47	100	79.188	Poecilia_formosa
ENSHGLG00100014028	-	100	79.114	ENSPLAG00000002072	rbm47	100	79.843	Poecilia_latipinna
ENSHGLG00100014028	-	100	81.333	ENSPMEG00000017492	rbm47	100	81.333	Poecilia_mexicana
ENSHGLG00100014028	-	100	79.747	ENSPREG00000008456	rbm47	100	80.105	Poecilia_reticulata
ENSHGLG00100014028	-	98	82.289	ENSPPYG00000014688	RBM47	100	79.831	Pongo_abelii
ENSHGLG00100014028	-	100	95.570	ENSPCAG00000011879	RBM47	81	94.987	Procavia_capensis
ENSHGLG00100014028	-	100	90.662	ENSPCOG00000023451	RBM47	100	90.323	Propithecus_coquereli
ENSHGLG00100014028	-	100	94.937	ENSPVAG00000003812	RBM47	100	92.424	Pteropus_vampyrus
ENSHGLG00100014028	-	100	81.912	ENSPNYG00000022868	rbm47	100	81.912	Pundamilia_nyererei
ENSHGLG00100014028	-	100	75.882	ENSPNAG00000007940	rbm47	100	79.897	Pygocentrus_nattereri
ENSHGLG00100014028	-	100	93.038	ENSRNOG00000002408	Rbm47	100	92.230	Rattus_norvegicus
ENSHGLG00100014028	-	100	96.203	ENSRBIG00000039601	RBM47	100	94.503	Rhinopithecus_bieti
ENSHGLG00100014028	-	100	96.203	ENSRROG00000044696	RBM47	100	94.503	Rhinopithecus_roxellana
ENSHGLG00100014028	-	100	95.570	ENSSBOG00000028475	RBM47	100	95.031	Saimiri_boliviensis_boliviensis
ENSHGLG00100014028	-	100	90.506	ENSSHAG00000017576	RBM47	100	90.169	Sarcophilus_harrisii
ENSHGLG00100014028	-	100	80.380	ENSSFOG00015024101	RBM47	100	72.651	Scleropages_formosus
ENSHGLG00100014028	-	100	75.148	ENSSFOG00015012445	rbm47	100	80.879	Scleropages_formosus
ENSHGLG00100014028	-	100	74.419	ENSSMAG00000009744	rbm47	100	79.434	Scophthalmus_maximus
ENSHGLG00100014028	-	100	81.646	ENSSDUG00000022684	rbm47	100	82.933	Seriola_dumerili
ENSHGLG00100014028	-	100	81.646	ENSSLDG00000003109	rbm47	100	82.933	Seriola_lalandi_dorsalis
ENSHGLG00100014028	-	100	94.304	ENSSARG00000001735	RBM47	84	93.750	Sorex_araneus
ENSHGLG00100014028	-	100	85.443	ENSSPUG00000007515	RBM47	100	87.566	Sphenodon_punctatus
ENSHGLG00100014028	-	100	82.500	ENSSPAG00000001257	rbm47	100	83.554	Stegastes_partitus
ENSHGLG00100014028	-	100	95.093	ENSSSCG00000008796	RBM47	100	94.407	Sus_scrofa
ENSHGLG00100014028	-	100	87.975	ENSTGUG00000008705	RBM47	100	87.374	Taeniopygia_guttata
ENSHGLG00100014028	-	94	84.564	ENSTRUG00000014050	rbm47	100	75.427	Takifugu_rubripes
ENSHGLG00100014028	-	100	76.608	ENSTNIG00000006127	rbm47	100	74.877	Tetraodon_nigroviridis
ENSHGLG00100014028	-	100	93.671	ENSTBEG00000001607	RBM47	76	88.800	Tupaia_belangeri
ENSHGLG00100014028	-	100	94.937	ENSTTRG00000002839	RBM47	100	93.559	Tursiops_truncatus
ENSHGLG00100014028	-	100	94.937	ENSUAMG00000021346	RBM47	100	93.412	Ursus_americanus
ENSHGLG00100014028	-	92	95.205	ENSVPAG00000000641	-	57	95.205	Vicugna_pacos
ENSHGLG00100014028	-	96	93.474	ENSVVUG00000014774	RBM47	100	92.047	Vulpes_vulpes
ENSHGLG00100014028	-	100	84.459	ENSXETG00000012802	rbm47	100	83.615	Xenopus_tropicalis
ENSHGLG00100014028	-	100	79.747	ENSXCOG00000000780	rbm47	100	80.423	Xiphophorus_couchianus
ENSHGLG00100014028	-	100	81.067	ENSXMAG00000009874	rbm47	100	81.067	Xiphophorus_maculatus