EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00100014303 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD1
Alias: C16orf40|MGC19600|RLUCL
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 5195 bases
Position: chrJH172427.1:617317-622511
Accession: 101708919
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100019395	PseudoU_synth_2	PF00849.22	8.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100019597	RPUSD1-201	4516	-	ENSHGLP00100019395	306 (aa)	XP_004873893	G5BXU8

Gene Model

Click here to download ENSHGLG00100014303's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100014303's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100014303	RPUSD1	100	81.731	ENSG00000007376	RPUSD1	100	88.095	Homo_sapiens
ENSHGLG00100014303	RPUSD1	98	55.960	ENSAPOG00000022221	rpusd1	98	55.960	Acanthochromis_polyacanthus
ENSHGLG00100014303	RPUSD1	100	82.353	ENSAMEG00000007461	RPUSD1	100	82.353	Ailuropoda_melanoleuca
ENSHGLG00100014303	RPUSD1	98	56.863	ENSACIG00000015863	rpusd1	98	56.863	Amphilophus_citrinellus
ENSHGLG00100014303	RPUSD1	98	56.393	ENSAOCG00000021975	rpusd1	95	56.393	Amphiprion_ocellaris
ENSHGLG00100014303	RPUSD1	98	56.066	ENSAPEG00000001316	rpusd1	95	56.066	Amphiprion_percula
ENSHGLG00100014303	RPUSD1	78	67.364	ENSATEG00000002984	rpusd1	98	57.049	Anabas_testudineus
ENSHGLG00100014303	RPUSD1	78	58.468	ENSAPLG00000012316	RPUSD1	100	57.787	Anas_platyrhynchos
ENSHGLG00100014303	RPUSD1	99	67.327	ENSACAG00000008953	RPUSD1	100	67.327	Anolis_carolinensis
ENSHGLG00100014303	RPUSD1	100	83.013	ENSANAG00000024709	RPUSD1	100	83.013	Aotus_nancymaae
ENSHGLG00100014303	RPUSD1	83	64.822	ENSACLG00000013692	rpusd1	98	57.003	Astatotilapia_calliptera
ENSHGLG00100014303	RPUSD1	99	58.416	ENSAMXG00000019802	rpusd1	100	57.980	Astyanax_mexicanus
ENSHGLG00100014303	RPUSD1	100	85.065	ENSBTAG00000000179	RPUSD1	100	84.740	Bos_taurus
ENSHGLG00100014303	RPUSD1	100	83.013	ENSCJAG00000012253	RPUSD1	100	82.692	Callithrix_jacchus
ENSHGLG00100014303	RPUSD1	100	83.007	ENSCAFG00000019614	RPUSD1	100	83.333	Canis_familiaris
ENSHGLG00100014303	RPUSD1	100	83.007	ENSCAFG00020008891	RPUSD1	100	83.333	Canis_lupus_dingo
ENSHGLG00100014303	RPUSD1	100	84.416	ENSCHIG00000012872	RPUSD1	100	84.091	Capra_hircus
ENSHGLG00100014303	RPUSD1	100	84.967	ENSTSYG00000036934	RPUSD1	100	84.641	Carlito_syrichta
ENSHGLG00100014303	RPUSD1	100	96.405	ENSCAPG00000014219	RPUSD1	100	96.405	Cavia_aperea
ENSHGLG00100014303	RPUSD1	100	96.405	ENSCPOG00000034604	RPUSD1	100	96.405	Cavia_porcellus
ENSHGLG00100014303	RPUSD1	100	83.974	ENSCCAG00000034385	RPUSD1	100	83.654	Cebus_capucinus
ENSHGLG00100014303	RPUSD1	100	83.333	ENSCATG00000042983	RPUSD1	100	83.013	Cercocebus_atys
ENSHGLG00100014303	RPUSD1	100	96.405	ENSCLAG00000013966	RPUSD1	100	96.405	Chinchilla_lanigera
ENSHGLG00100014303	RPUSD1	100	83.013	ENSCSAG00000012121	RPUSD1	100	82.692	Chlorocebus_sabaeus
ENSHGLG00100014303	RPUSD1	99	63.961	ENSCPBG00000021101	RPUSD1	99	64.145	Chrysemys_picta_bellii
ENSHGLG00100014303	RPUSD1	92	86.121	ENSCANG00000028576	RPUSD1	95	88.015	Colobus_angolensis_palliatus
ENSHGLG00100014303	RPUSD1	100	85.294	ENSCGRG00001014253	Rpusd1	100	85.294	Cricetulus_griseus_chok1gshd
ENSHGLG00100014303	RPUSD1	100	85.294	ENSCGRG00000017995	Rpusd1	100	85.294	Cricetulus_griseus_crigri
ENSHGLG00100014303	RPUSD1	99	55.410	ENSCSEG00000018512	rpusd1	100	55.410	Cynoglossus_semilaevis
ENSHGLG00100014303	RPUSD1	98	54.902	ENSCVAG00000022746	rpusd1	98	55.667	Cyprinodon_variegatus
ENSHGLG00100014303	RPUSD1	99	61.056	ENSDARG00000060192	rpusd1	100	59.486	Danio_rerio
ENSHGLG00100014303	RPUSD1	100	80.323	ENSDNOG00000003721	RPUSD1	100	79.618	Dasypus_novemcinctus
ENSHGLG00100014303	RPUSD1	100	87.582	ENSDORG00000026656	Rpusd1	100	87.908	Dipodomys_ordii
ENSHGLG00100014303	RPUSD1	99	46.708	ENSEBUG00000008767	rpusd1	94	46.708	Eptatretus_burgeri
ENSHGLG00100014303	RPUSD1	100	83.544	ENSEASG00005018421	RPUSD1	76	83.544	Equus_asinus_asinus
ENSHGLG00100014303	RPUSD1	83	59.843	ENSELUG00000014307	rpusd1	88	53.770	Esox_lucius
ENSHGLG00100014303	RPUSD1	100	82.680	ENSFCAG00000010359	RPUSD1	100	82.680	Felis_catus
ENSHGLG00100014303	RPUSD1	99	66.230	ENSFALG00000003211	RPUSD1	100	66.230	Ficedula_albicollis
ENSHGLG00100014303	RPUSD1	100	97.712	ENSFDAG00000013398	RPUSD1	100	97.712	Fukomys_damarensis
ENSHGLG00100014303	RPUSD1	98	55.116	ENSFHEG00000004736	rpusd1	98	55.116	Fundulus_heteroclitus
ENSHGLG00100014303	RPUSD1	83	62.055	ENSGMOG00000010756	rpusd1	98	54.605	Gadus_morhua
ENSHGLG00100014303	RPUSD1	99	64.286	ENSGALG00000005315	RPUSD1	100	63.961	Gallus_gallus
ENSHGLG00100014303	RPUSD1	98	56.106	ENSGAFG00000009886	rpusd1	98	56.667	Gambusia_affinis
ENSHGLG00100014303	RPUSD1	82	62.948	ENSGACG00000014276	rpusd1	97	55.446	Gasterosteus_aculeatus
ENSHGLG00100014303	RPUSD1	99	63.844	ENSGAGG00000004181	RPUSD1	99	63.487	Gopherus_agassizii
ENSHGLG00100014303	RPUSD1	100	81.410	ENSGGOG00000013997	RPUSD1	100	81.410	Gorilla_gorilla
ENSHGLG00100014303	RPUSD1	83	64.427	ENSHBUG00000023728	rpusd1	98	56.678	Haplochromis_burtoni
ENSHGLG00100014303	RPUSD1	100	100.000	ENSHGLG00000002595	RPUSD1	100	100.000	Heterocephalus_glaber_female
ENSHGLG00100014303	RPUSD1	98	57.143	ENSHCOG00000002390	rpusd1	99	57.143	Hippocampus_comes
ENSHGLG00100014303	RPUSD1	99	59.868	ENSIPUG00000001570	rpusd1	99	59.868	Ictalurus_punctatus
ENSHGLG00100014303	RPUSD1	100	88.562	ENSSTOG00000004276	RPUSD1	100	88.562	Ictidomys_tridecemlineatus
ENSHGLG00100014303	RPUSD1	100	87.908	ENSJJAG00000015696	Rpusd1	100	87.908	Jaculus_jaculus
ENSHGLG00100014303	RPUSD1	98	55.116	ENSKMAG00000017287	rpusd1	98	55.629	Kryptolebias_marmoratus
ENSHGLG00100014303	RPUSD1	98	55.410	ENSLBEG00000013354	RPUSD1	98	55.410	Labrus_bergylta
ENSHGLG00100014303	RPUSD1	98	55.410	ENSLBEG00000022502	rpusd1	98	55.410	Labrus_bergylta
ENSHGLG00100014303	RPUSD1	99	60.656	ENSLACG00000008869	RPUSD1	99	60.927	Latimeria_chalumnae
ENSHGLG00100014303	RPUSD1	71	73.148	ENSLOCG00000005682	rpusd1	99	73.148	Lepisosteus_oculatus
ENSHGLG00100014303	RPUSD1	100	81.046	ENSLAFG00000002115	RPUSD1	100	80.719	Loxodonta_africana
ENSHGLG00100014303	RPUSD1	100	83.333	ENSMFAG00000003961	RPUSD1	100	83.654	Macaca_fascicularis
ENSHGLG00100014303	RPUSD1	100	83.333	ENSMMUG00000000842	RPUSD1	100	83.654	Macaca_mulatta
ENSHGLG00100014303	RPUSD1	100	83.333	ENSMNEG00000042712	RPUSD1	100	83.654	Macaca_nemestrina
ENSHGLG00100014303	RPUSD1	100	83.333	ENSMLEG00000030591	RPUSD1	100	83.654	Mandrillus_leucophaeus
ENSHGLG00100014303	RPUSD1	83	64.427	ENSMAMG00000004735	rpusd1	98	57.190	Mastacembelus_armatus
ENSHGLG00100014303	RPUSD1	83	64.822	ENSMZEG00005003214	rpusd1	98	57.003	Maylandia_zebra
ENSHGLG00100014303	RPUSD1	97	64.120	ENSMGAG00000005447	RPUSD1	99	63.787	Meleagris_gallopavo
ENSHGLG00100014303	RPUSD1	86	80.916	ENSMAUG00000019998	Rpusd1	100	80.916	Mesocricetus_auratus
ENSHGLG00100014303	RPUSD1	100	85.668	ENSMICG00000017561	RPUSD1	100	85.668	Microcebus_murinus
ENSHGLG00100014303	RPUSD1	100	87.908	ENSMOCG00000014082	Rpusd1	100	87.908	Microtus_ochrogaster
ENSHGLG00100014303	RPUSD1	80	65.714	ENSMMOG00000012569	rpusd1	99	57.667	Mola_mola
ENSHGLG00100014303	RPUSD1	100	68.571	ENSMODG00000016882	RPUSD1	100	68.710	Monodelphis_domestica
ENSHGLG00100014303	RPUSD1	98	55.882	ENSMALG00000017818	rpusd1	98	56.536	Monopterus_albus
ENSHGLG00100014303	RPUSD1	100	87.908	MGP_CAROLIEiJ_G0021244	Rpusd1	100	87.908	Mus_caroli
ENSHGLG00100014303	RPUSD1	100	87.908	ENSMUSG00000041199	Rpusd1	100	87.908	Mus_musculus
ENSHGLG00100014303	RPUSD1	100	86.364	MGP_PahariEiJ_G0023562	Rpusd1	100	86.364	Mus_pahari
ENSHGLG00100014303	RPUSD1	100	87.908	MGP_SPRETEiJ_G0022155	Rpusd1	100	87.908	Mus_spretus
ENSHGLG00100014303	RPUSD1	100	83.333	ENSMPUG00000015897	RPUSD1	100	83.007	Mustela_putorius_furo
ENSHGLG00100014303	RPUSD1	100	84.936	ENSMLUG00000001089	RPUSD1	100	84.887	Myotis_lucifugus
ENSHGLG00100014303	RPUSD1	100	87.255	ENSNGAG00000003595	Rpusd1	100	87.255	Nannospalax_galili
ENSHGLG00100014303	RPUSD1	81	64.777	ENSNBRG00000006457	rpusd1	98	57.191	Neolamprologus_brichardi
ENSHGLG00100014303	RPUSD1	55	76.571	ENSNLEG00000008424	-	100	77.143	Nomascus_leucogenys
ENSHGLG00100014303	RPUSD1	100	69.132	ENSMEUG00000016049	RPUSD1	100	67.857	Notamacropus_eugenii
ENSHGLG00100014303	RPUSD1	99	78.289	ENSOPRG00000008340	RPUSD1	99	77.303	Ochotona_princeps
ENSHGLG00100014303	RPUSD1	100	94.118	ENSODEG00000016945	RPUSD1	100	94.118	Octodon_degus
ENSHGLG00100014303	RPUSD1	83	63.241	ENSONIG00000015672	rpusd1	99	55.700	Oreochromis_niloticus
ENSHGLG00100014303	RPUSD1	99	57.003	ENSORLG00000013009	rpusd1	99	57.285	Oryzias_latipes
ENSHGLG00100014303	RPUSD1	99	56.678	ENSORLG00020010382	rpusd1	99	56.954	Oryzias_latipes_hni
ENSHGLG00100014303	RPUSD1	99	56.026	ENSORLG00015021354	rpusd1	99	56.291	Oryzias_latipes_hsok
ENSHGLG00100014303	RPUSD1	98	57.525	ENSOMEG00000021426	rpusd1	98	57.525	Oryzias_melastigma
ENSHGLG00100014303	RPUSD1	100	86.859	ENSOGAG00000003795	RPUSD1	100	86.859	Otolemur_garnettii
ENSHGLG00100014303	RPUSD1	100	84.416	ENSOARG00000014254	RPUSD1	100	84.091	Ovis_aries
ENSHGLG00100014303	RPUSD1	100	81.410	ENSPPAG00000034797	RPUSD1	100	81.410	Pan_paniscus
ENSHGLG00100014303	RPUSD1	100	82.353	ENSPPRG00000012389	RPUSD1	100	82.353	Panthera_pardus
ENSHGLG00100014303	RPUSD1	100	82.026	ENSPTIG00000008545	RPUSD1	92	82.026	Panthera_tigris_altaica
ENSHGLG00100014303	RPUSD1	100	81.410	ENSPTRG00000007565	RPUSD1	100	81.410	Pan_troglodytes
ENSHGLG00100014303	RPUSD1	100	82.692	ENSPANG00000024401	RPUSD1	100	83.013	Papio_anubis
ENSHGLG00100014303	RPUSD1	99	60.855	ENSPKIG00000018890	rpusd1	91	60.855	Paramormyrops_kingsleyae
ENSHGLG00100014303	RPUSD1	99	64.610	ENSPSIG00000013945	RPUSD1	100	64.918	Pelodiscus_sinensis
ENSHGLG00100014303	RPUSD1	98	57.860	ENSPMGG00000014950	rpusd1	98	57.860	Periophthalmus_magnuspinnatus
ENSHGLG00100014303	RPUSD1	100	86.928	ENSPEMG00000000497	Rpusd1	100	86.928	Peromyscus_maniculatus_bairdii
ENSHGLG00100014303	RPUSD1	82	56.349	ENSPMAG00000001563	rpusd1	82	56.349	Petromyzon_marinus
ENSHGLG00100014303	RPUSD1	100	69.010	ENSPCIG00000021216	-	94	69.281	Phascolarctos_cinereus
ENSHGLG00100014303	RPUSD1	98	57.191	ENSPFOG00000007946	rpusd1	98	57.191	Poecilia_formosa
ENSHGLG00100014303	RPUSD1	98	57.525	ENSPLAG00000011925	rpusd1	98	57.525	Poecilia_latipinna
ENSHGLG00100014303	RPUSD1	98	56.856	ENSPMEG00000002910	rpusd1	98	56.856	Poecilia_mexicana
ENSHGLG00100014303	RPUSD1	98	57.000	ENSPREG00000019851	rpusd1	98	57.000	Poecilia_reticulata
ENSHGLG00100014303	RPUSD1	100	67.320	ENSPCAG00000002258	RPUSD1	100	67.320	Procavia_capensis
ENSHGLG00100014303	RPUSD1	100	88.141	ENSPCOG00000022582	RPUSD1	100	87.821	Propithecus_coquereli
ENSHGLG00100014303	RPUSD1	100	81.090	ENSPVAG00000013104	RPUSD1	100	80.769	Pteropus_vampyrus
ENSHGLG00100014303	RPUSD1	98	56.856	ENSPNYG00000024076	rpusd1	98	57.191	Pundamilia_nyererei
ENSHGLG00100014303	RPUSD1	99	57.096	ENSPNAG00000013806	rpusd1	100	56.766	Pygocentrus_nattereri
ENSHGLG00100014303	RPUSD1	100	87.582	ENSRNOG00000023639	Rpusd1	100	87.582	Rattus_norvegicus
ENSHGLG00100014303	RPUSD1	100	83.013	ENSRBIG00000030238	RPUSD1	100	83.013	Rhinopithecus_bieti
ENSHGLG00100014303	RPUSD1	100	83.013	ENSRROG00000036663	RPUSD1	100	83.013	Rhinopithecus_roxellana
ENSHGLG00100014303	RPUSD1	100	84.641	ENSSBOG00000033063	RPUSD1	100	84.314	Saimiri_boliviensis_boliviensis
ENSHGLG00100014303	RPUSD1	100	68.371	ENSSHAG00000013500	RPUSD1	100	68.627	Sarcophilus_harrisii
ENSHGLG00100014303	RPUSD1	99	60.194	ENSSFOG00015014394	rpusd1	99	61.513	Scleropages_formosus
ENSHGLG00100014303	RPUSD1	98	55.663	ENSSMAG00000008045	rpusd1	91	55.663	Scophthalmus_maximus
ENSHGLG00100014303	RPUSD1	83	65.217	ENSSDUG00000001829	rpusd1	95	57.705	Seriola_dumerili
ENSHGLG00100014303	RPUSD1	83	65.217	ENSSLDG00000020853	rpusd1	95	57.705	Seriola_lalandi_dorsalis
ENSHGLG00100014303	RPUSD1	55	88.024	ENSSARG00000011187	-	100	88.024	Sorex_araneus
ENSHGLG00100014303	RPUSD1	63	52.500	ENSSPUG00000005119	-	100	52.083	Sphenodon_punctatus
ENSHGLG00100014303	RPUSD1	98	56.721	ENSSPAG00000012708	rpusd1	98	57.049	Stegastes_partitus
ENSHGLG00100014303	RPUSD1	100	83.013	ENSSSCG00000008000	RPUSD1	99	87.160	Sus_scrofa
ENSHGLG00100014303	RPUSD1	83	72.157	ENSTGUG00000015375	RPUSD1	100	72.157	Taeniopygia_guttata
ENSHGLG00100014303	RPUSD1	98	55.882	ENSTRUG00000003041	rpusd1	98	55.882	Takifugu_rubripes
ENSHGLG00100014303	RPUSD1	98	54.000	ENSTNIG00000002660	rpusd1	99	54.000	Tetraodon_nigroviridis
ENSHGLG00100014303	RPUSD1	100	84.295	ENSTTRG00000010167	RPUSD1	100	82.692	Tursiops_truncatus
ENSHGLG00100014303	RPUSD1	100	83.007	ENSUAMG00000012736	RPUSD1	100	83.007	Ursus_americanus
ENSHGLG00100014303	RPUSD1	100	83.007	ENSUMAG00000021174	RPUSD1	100	83.007	Ursus_maritimus
ENSHGLG00100014303	RPUSD1	100	83.007	ENSVVUG00000012357	RPUSD1	100	82.353	Vulpes_vulpes
ENSHGLG00100014303	RPUSD1	100	59.477	ENSXETG00000007184	rpusd1	100	59.477	Xenopus_tropicalis
ENSHGLG00100014303	RPUSD1	98	55.776	ENSXCOG00000017930	rpusd1	98	56.000	Xiphophorus_couchianus
ENSHGLG00100014303	RPUSD1	98	56.106	ENSXMAG00000024084	rpusd1	98	56.667	Xiphophorus_maculatus