EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00100014475 (Gene tree)
Gene ID: -
Gene Symbol: DDB1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 22154 bases
Position: chrJH167515.1:987313-1009466
Accession: 2717
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100019632	CPSF_A	PF03178.15	1.3e-78	1	1
ENSHGLP00100019633	CPSF_A	PF03178.15	6.7e-76	1	1
ENSHGLP00100019634	CPSF_A	PF03178.15	1.2e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100019840	DDB1-202	3282	-	ENSHGLP00100019633	1093 (aa)	-	-
ENSHGLT00100019839	DDB1-201	3393	-	ENSHGLP00100019632	1130 (aa)	-	-
ENSHGLT00100019841	DDB1-203	3282	-	ENSHGLP00100019634	1093 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100014475's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100014475's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100014475	DDB1	100	97.982	ENSG00000167986	DDB1	100	100.000	Homo_sapiens
ENSHGLG00100014475	DDB1	98	90.386	ENSAPOG00000005036	ddb1	99	90.204	Acanthochromis_polyacanthus
ENSHGLG00100014475	DDB1	100	98.070	ENSAMEG00000016518	DDB1	100	98.070	Ailuropoda_melanoleuca
ENSHGLG00100014475	DDB1	86	90.510	ENSACIG00000020624	ddb1	99	90.510	Amphilophus_citrinellus
ENSHGLG00100014475	DDB1	100	90.088	ENSAOCG00000003066	ddb1	100	90.088	Amphiprion_ocellaris
ENSHGLG00100014475	DDB1	100	90.263	ENSAPEG00000000092	ddb1	100	90.263	Amphiprion_percula
ENSHGLG00100014475	DDB1	94	90.512	ENSATEG00000020571	ddb1	97	90.512	Anabas_testudineus
ENSHGLG00100014475	DDB1	98	95.022	ENSAPLG00000007174	DDB1	99	95.022	Anas_platyrhynchos
ENSHGLG00100014475	DDB1	100	95.614	ENSACAG00000017758	DDB1	100	95.614	Anolis_carolinensis
ENSHGLG00100014475	DDB1	100	97.982	ENSANAG00000021878	DDB1	100	97.982	Aotus_nancymaae
ENSHGLG00100014475	DDB1	100	90.351	ENSACLG00000012401	ddb1	100	90.351	Astatotilapia_calliptera
ENSHGLG00100014475	DDB1	100	97.895	ENSBTAG00000021569	DDB1	93	97.895	Bos_taurus
ENSHGLG00100014475	DDB1	100	36.441	WBGene00010890	ddb-1	100	36.356	Caenorhabditis_elegans
ENSHGLG00100014475	DDB1	100	97.982	ENSCJAG00000019319	DDB1	100	97.982	Callithrix_jacchus
ENSHGLG00100014475	DDB1	100	98.070	ENSCAFG00000016264	DDB1	100	98.070	Canis_familiaris
ENSHGLG00100014475	DDB1	94	97.767	ENSCAFG00020012722	DDB1	99	97.767	Canis_lupus_dingo
ENSHGLG00100014475	DDB1	100	97.895	ENSCHIG00000014969	DDB1	100	97.895	Capra_hircus
ENSHGLG00100014475	DDB1	100	97.632	ENSTSYG00000008027	DDB1	100	97.632	Carlito_syrichta
ENSHGLG00100014475	DDB1	98	98.034	ENSCAPG00000010786	DDB1	100	98.034	Cavia_aperea
ENSHGLG00100014475	DDB1	100	98.070	ENSCPOG00000009956	DDB1	100	98.070	Cavia_porcellus
ENSHGLG00100014475	DDB1	100	97.982	ENSCCAG00000035883	DDB1	100	97.982	Cebus_capucinus
ENSHGLG00100014475	DDB1	100	95.486	ENSCATG00000044495	DDB1	100	95.486	Cercocebus_atys
ENSHGLG00100014475	DDB1	100	98.246	ENSCLAG00000004126	DDB1	100	98.246	Chinchilla_lanigera
ENSHGLG00100014475	DDB1	100	97.982	ENSCSAG00000006392	DDB1	100	97.982	Chlorocebus_sabaeus
ENSHGLG00100014475	DDB1	87	90.720	ENSCHOG00000011377	DDB1	90	90.720	Choloepus_hoffmanni
ENSHGLG00100014475	DDB1	100	96.491	ENSCPBG00000017728	DDB1	100	96.491	Chrysemys_picta_bellii
ENSHGLG00100014475	DDB1	100	61.111	ENSCING00000007437	-	100	61.024	Ciona_intestinalis
ENSHGLG00100014475	DDB1	94	59.447	ENSCSAVG00000004783	-	100	59.447	Ciona_savignyi
ENSHGLG00100014475	DDB1	100	97.982	ENSCANG00000019948	DDB1	100	97.982	Colobus_angolensis_palliatus
ENSHGLG00100014475	DDB1	100	98.158	ENSCGRG00001016599	Ddb1	100	98.158	Cricetulus_griseus_chok1gshd
ENSHGLG00100014475	DDB1	100	98.158	ENSCGRG00000013427	Ddb1	100	98.158	Cricetulus_griseus_crigri
ENSHGLG00100014475	DDB1	93	89.821	ENSCSEG00000012499	ddb1	99	88.158	Cynoglossus_semilaevis
ENSHGLG00100014475	DDB1	94	90.214	ENSCVAG00000019531	ddb1	99	90.214	Cyprinodon_variegatus
ENSHGLG00100014475	DDB1	100	87.391	ENSDARG00000074431	ddb1	100	87.391	Danio_rerio
ENSHGLG00100014475	DDB1	94	97.674	ENSDNOG00000014884	DDB1	97	97.674	Dasypus_novemcinctus
ENSHGLG00100014475	DDB1	88	100.000	ENSDORG00000000127	Ddb1	100	100.000	Dipodomys_ordii
ENSHGLG00100014475	DDB1	100	60.175	FBgn0260962	pic	100	59.965	Drosophila_melanogaster
ENSHGLG00100014475	DDB1	71	100.000	ENSETEG00000001053	-	71	100.000	Echinops_telfairi
ENSHGLG00100014475	DDB1	78	84.318	ENSEBUG00000014593	ddb1	97	84.318	Eptatretus_burgeri
ENSHGLG00100014475	DDB1	100	97.895	ENSEASG00005008184	DDB1	100	97.895	Equus_asinus_asinus
ENSHGLG00100014475	DDB1	100	97.807	ENSECAG00000012136	DDB1	100	97.807	Equus_caballus
ENSHGLG00100014475	DDB1	85	95.118	ENSEEUG00000003194	DDB1	85	95.118	Erinaceus_europaeus
ENSHGLG00100014475	DDB1	62	30.726	ENSEEUG00000015611	SF3B3	58	30.726	Erinaceus_europaeus
ENSHGLG00100014475	DDB1	100	90.088	ENSELUG00000023868	ddb1	100	90.088	Esox_lucius
ENSHGLG00100014475	DDB1	100	98.070	ENSFCAG00000029716	DDB1	100	98.070	Felis_catus
ENSHGLG00100014475	DDB1	100	95.451	ENSFALG00000011981	DDB1	100	95.451	Ficedula_albicollis
ENSHGLG00100014475	DDB1	100	98.333	ENSFDAG00000005128	DDB1	100	98.333	Fukomys_damarensis
ENSHGLG00100014475	DDB1	90	92.800	ENSFHEG00000022133	ddb1	98	92.800	Fundulus_heteroclitus
ENSHGLG00100014475	DDB1	79	94.649	ENSGMOG00000019386	ddb1	94	94.649	Gadus_morhua
ENSHGLG00100014475	DDB1	100	95.614	ENSGALG00000042333	DDB1	100	95.614	Gallus_gallus
ENSHGLG00100014475	DDB1	94	90.028	ENSGAFG00000013142	ddb1	99	90.028	Gambusia_affinis
ENSHGLG00100014475	DDB1	96	89.368	ENSGACG00000017182	ddb1	100	89.368	Gasterosteus_aculeatus
ENSHGLG00100014475	DDB1	95	96.310	ENSGAGG00000014124	DDB1	100	96.310	Gopherus_agassizii
ENSHGLG00100014475	DDB1	100	97.982	ENSGGOG00000004052	DDB1	100	97.982	Gorilla_gorilla
ENSHGLG00100014475	DDB1	100	90.351	ENSHBUG00000008873	ddb1	100	90.351	Haplochromis_burtoni
ENSHGLG00100014475	DDB1	100	98.904	ENSHGLG00000018430	DDB1	100	98.904	Heterocephalus_glaber_female
ENSHGLG00100014475	DDB1	94	89.777	ENSHCOG00000018670	ddb1	98	89.777	Hippocampus_comes
ENSHGLG00100014475	DDB1	100	89.561	ENSIPUG00000005612	DDB1	100	89.561	Ictalurus_punctatus
ENSHGLG00100014475	DDB1	100	97.982	ENSSTOG00000007552	DDB1	100	97.982	Ictidomys_tridecemlineatus
ENSHGLG00100014475	DDB1	100	97.807	ENSJJAG00000017769	Ddb1	100	97.807	Jaculus_jaculus
ENSHGLG00100014475	DDB1	94	90.121	ENSKMAG00000002315	ddb1	99	90.121	Kryptolebias_marmoratus
ENSHGLG00100014475	DDB1	85	90.155	ENSLBEG00000017065	ddb1	99	90.155	Labrus_bergylta
ENSHGLG00100014475	DDB1	100	92.294	ENSLACG00000017611	DDB1	100	92.294	Latimeria_chalumnae
ENSHGLG00100014475	DDB1	92	83.333	ENSLOCG00000000012	ddb1	100	83.333	Lepisosteus_oculatus
ENSHGLG00100014475	DDB1	100	97.982	ENSLAFG00000011513	DDB1	100	97.982	Loxodonta_africana
ENSHGLG00100014475	DDB1	100	97.982	ENSMFAG00000042035	DDB1	100	97.982	Macaca_fascicularis
ENSHGLG00100014475	DDB1	99	97.966	ENSMMUG00000002691	DDB1	99	97.966	Macaca_mulatta
ENSHGLG00100014475	DDB1	100	97.982	ENSMNEG00000031559	DDB1	100	97.982	Macaca_nemestrina
ENSHGLG00100014475	DDB1	100	97.982	ENSMLEG00000044136	DDB1	100	97.982	Mandrillus_leucophaeus
ENSHGLG00100014475	DDB1	100	90.439	ENSMAMG00000014372	ddb1	100	90.439	Mastacembelus_armatus
ENSHGLG00100014475	DDB1	100	90.263	ENSMZEG00005013835	ddb1	100	90.263	Maylandia_zebra
ENSHGLG00100014475	DDB1	94	94.879	ENSMGAG00000004990	DDB1	100	94.879	Meleagris_gallopavo
ENSHGLG00100014475	DDB1	100	98.158	ENSMAUG00000012926	Ddb1	100	98.158	Mesocricetus_auratus
ENSHGLG00100014475	DDB1	100	98.070	ENSMICG00000013703	DDB1	100	98.070	Microcebus_murinus
ENSHGLG00100014475	DDB1	100	97.895	ENSMOCG00000020499	Ddb1	100	97.895	Microtus_ochrogaster
ENSHGLG00100014475	DDB1	86	90.510	ENSMMOG00000001758	ddb1	99	90.510	Mola_mola
ENSHGLG00100014475	DDB1	100	87.543	ENSMODG00000020353	DDB1	100	87.543	Monodelphis_domestica
ENSHGLG00100014475	DDB1	100	90.351	ENSMALG00000014071	ddb1	100	90.351	Monopterus_albus
ENSHGLG00100014475	DDB1	100	98.070	MGP_CAROLIEiJ_G0022695	Ddb1	100	98.070	Mus_caroli
ENSHGLG00100014475	DDB1	100	97.895	ENSMUSG00000024740	Ddb1	100	97.895	Mus_musculus
ENSHGLG00100014475	DDB1	100	98.070	MGP_PahariEiJ_G0014189	Ddb1	100	98.070	Mus_pahari
ENSHGLG00100014475	DDB1	100	97.982	MGP_SPRETEiJ_G0023609	Ddb1	100	97.982	Mus_spretus
ENSHGLG00100014475	DDB1	100	94.737	ENSMPUG00000014200	DDB1	100	94.737	Mustela_putorius_furo
ENSHGLG00100014475	DDB1	100	97.632	ENSMLUG00000013232	DDB1	100	97.632	Myotis_lucifugus
ENSHGLG00100014475	DDB1	100	97.895	ENSNGAG00000009384	Ddb1	100	97.895	Nannospalax_galili
ENSHGLG00100014475	DDB1	100	90.439	ENSNBRG00000019581	ddb1	100	90.439	Neolamprologus_brichardi
ENSHGLG00100014475	DDB1	100	94.878	ENSNLEG00000002022	DDB1	100	94.878	Nomascus_leucogenys
ENSHGLG00100014475	DDB1	90	98.913	ENSMEUG00000001099	DDB1	91	98.913	Notamacropus_eugenii
ENSHGLG00100014475	DDB1	90	90.107	ENSOPRG00000008254	DDB1	90	90.107	Ochotona_princeps
ENSHGLG00100014475	DDB1	100	97.895	ENSODEG00000002419	DDB1	100	97.895	Octodon_degus
ENSHGLG00100014475	DDB1	100	90.439	ENSONIG00000005804	ddb1	100	90.439	Oreochromis_niloticus
ENSHGLG00100014475	DDB1	90	96.512	ENSOANG00000004897	DDB1	100	96.512	Ornithorhynchus_anatinus
ENSHGLG00100014475	DDB1	100	97.982	ENSOCUG00000001667	DDB1	100	97.982	Oryctolagus_cuniculus
ENSHGLG00100014475	DDB1	96	88.818	ENSORLG00000001399	ddb1	98	90.010	Oryzias_latipes
ENSHGLG00100014475	DDB1	96	88.726	ENSORLG00020001277	ddb1	97	88.726	Oryzias_latipes_hni
ENSHGLG00100014475	DDB1	94	89.860	ENSORLG00015002080	ddb1	99	89.860	Oryzias_latipes_hsok
ENSHGLG00100014475	DDB1	96	88.696	ENSOMEG00000006181	ddb1	99	88.696	Oryzias_melastigma
ENSHGLG00100014475	DDB1	100	97.895	ENSOGAG00000016103	DDB1	100	97.895	Otolemur_garnettii
ENSHGLG00100014475	DDB1	98	97.863	ENSOARG00000011716	DDB1	98	97.863	Ovis_aries
ENSHGLG00100014475	DDB1	100	97.982	ENSPPAG00000035343	DDB1	100	97.982	Pan_paniscus
ENSHGLG00100014475	DDB1	100	98.070	ENSPPRG00000013300	DDB1	100	98.070	Panthera_pardus
ENSHGLG00100014475	DDB1	98	98.034	ENSPTIG00000006909	DDB1	98	98.034	Panthera_tigris_altaica
ENSHGLG00100014475	DDB1	100	97.982	ENSPTRG00000003737	DDB1	100	97.982	Pan_troglodytes
ENSHGLG00100014475	DDB1	100	97.982	ENSPANG00000000242	DDB1	100	97.982	Papio_anubis
ENSHGLG00100014475	DDB1	94	90.028	ENSPKIG00000019213	ddb1	94	90.028	Paramormyrops_kingsleyae
ENSHGLG00100014475	DDB1	98	95.552	ENSPSIG00000013275	DDB1	100	95.552	Pelodiscus_sinensis
ENSHGLG00100014475	DDB1	86	90.204	ENSPMGG00000021179	ddb1	99	90.204	Periophthalmus_magnuspinnatus
ENSHGLG00100014475	DDB1	100	98.158	ENSPEMG00000012241	Ddb1	100	98.158	Peromyscus_maniculatus_bairdii
ENSHGLG00100014475	DDB1	89	85.363	ENSPMAG00000008479	ddb1	100	85.363	Petromyzon_marinus
ENSHGLG00100014475	DDB1	100	97.544	ENSPCIG00000002643	DDB1	100	97.544	Phascolarctos_cinereus
ENSHGLG00100014475	DDB1	100	89.833	ENSPFOG00000002768	ddb1	100	89.833	Poecilia_formosa
ENSHGLG00100014475	DDB1	100	89.649	ENSPLAG00000017227	ddb1	100	89.649	Poecilia_latipinna
ENSHGLG00100014475	DDB1	100	89.649	ENSPMEG00000011398	ddb1	100	89.649	Poecilia_mexicana
ENSHGLG00100014475	DDB1	94	90.140	ENSPREG00000004440	ddb1	98	90.140	Poecilia_reticulata
ENSHGLG00100014475	DDB1	100	93.106	ENSPPYG00000003193	DDB1	100	93.106	Pongo_abelii
ENSHGLG00100014475	DDB1	85	97.164	ENSPCAG00000011040	DDB1	85	97.164	Procavia_capensis
ENSHGLG00100014475	DDB1	100	96.497	ENSPCOG00000015176	DDB1	100	96.497	Propithecus_coquereli
ENSHGLG00100014475	DDB1	100	97.895	ENSPVAG00000003847	DDB1	100	97.895	Pteropus_vampyrus
ENSHGLG00100014475	DDB1	50	88.434	ENSPNYG00000010482	ddb1	100	88.434	Pundamilia_nyererei
ENSHGLG00100014475	DDB1	94	90.121	ENSPNAG00000006635	ddb1	97	90.121	Pygocentrus_nattereri
ENSHGLG00100014475	DDB1	100	98.070	ENSRNOG00000020715	Ddb1	100	98.070	Rattus_norvegicus
ENSHGLG00100014475	DDB1	100	97.982	ENSRBIG00000033611	DDB1	100	97.982	Rhinopithecus_bieti
ENSHGLG00100014475	DDB1	100	97.982	ENSRROG00000041407	DDB1	100	97.982	Rhinopithecus_roxellana
ENSHGLG00100014475	DDB1	100	97.895	ENSSBOG00000019775	DDB1	100	97.895	Saimiri_boliviensis_boliviensis
ENSHGLG00100014475	DDB1	94	95.140	ENSSHAG00000011600	DDB1	100	95.140	Sarcophilus_harrisii
ENSHGLG00100014475	DDB1	94	90.149	ENSSFOG00015011151	ddb1	97	90.149	Scleropages_formosus
ENSHGLG00100014475	DDB1	100	90.000	ENSSMAG00000009495	ddb1	100	90.000	Scophthalmus_maximus
ENSHGLG00100014475	DDB1	100	90.351	ENSSDUG00000004642	ddb1	100	90.351	Seriola_dumerili
ENSHGLG00100014475	DDB1	100	90.351	ENSSLDG00000015804	ddb1	100	90.351	Seriola_lalandi_dorsalis
ENSHGLG00100014475	DDB1	72	100.000	ENSSARG00000003290	-	72	100.000	Sorex_araneus
ENSHGLG00100014475	DDB1	100	96.316	ENSSPUG00000019338	DDB1	100	96.316	Sphenodon_punctatus
ENSHGLG00100014475	DDB1	94	90.419	ENSSPAG00000009888	ddb1	99	90.419	Stegastes_partitus
ENSHGLG00100014475	DDB1	100	97.018	ENSSSCG00000013094	DDB1	100	97.018	Sus_scrofa
ENSHGLG00100014475	DDB1	100	95.614	ENSTGUG00000006414	DDB1	100	95.614	Taeniopygia_guttata
ENSHGLG00100014475	DDB1	94	89.096	ENSTRUG00000016682	ddb1	98	89.096	Takifugu_rubripes
ENSHGLG00100014475	DDB1	88	84.915	ENSTNIG00000009565	ddb1	99	84.915	Tetraodon_nigroviridis
ENSHGLG00100014475	DDB1	94	92.288	ENSTTRG00000011055	DDB1	94	92.428	Tursiops_truncatus
ENSHGLG00100014475	DDB1	94	97.767	ENSUAMG00000017793	DDB1	93	97.767	Ursus_americanus
ENSHGLG00100014475	DDB1	94	97.767	ENSUMAG00000011788	DDB1	98	97.767	Ursus_maritimus
ENSHGLG00100014475	DDB1	90	99.020	ENSVPAG00000007963	DDB1	92	99.020	Vicugna_pacos
ENSHGLG00100014475	DDB1	100	97.982	ENSVVUG00000004987	DDB1	100	97.982	Vulpes_vulpes
ENSHGLG00100014475	DDB1	100	92.133	ENSXETG00000008820	ddb1	100	92.133	Xenopus_tropicalis
ENSHGLG00100014475	DDB1	86	90.000	ENSXCOG00000013956	ddb1	99	90.000	Xiphophorus_couchianus
ENSHGLG00100014475	DDB1	94	90.028	ENSXMAG00000000022	ddb1	99	90.028	Xiphophorus_maculatus