EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100014550 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RAB6A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 66316 bases
Position: chrJH166727.1:1854732-1921047
Accession: 101716700
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100019736	MMR_HSR1	PF01926.23	5e-05	1	1
ENSHGLP00100019737	MMR_HSR1	PF01926.23	5.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100019945	-	3094	XM_013065021	ENSHGLP00100019737	207 (aa)	XP_012920475	G5ASA2
ENSHGLT00100019944	-	3094	XM_013065020	ENSHGLP00100019736	207 (aa)	XP_012920474	-

Gene Model

Click here to download ENSHGLG00100014550's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100014550's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100014550	-	93	31.088	ENSHGLG00100010073	-	96	31.088
ENSHGLG00100014550	-	74	38.312	ENSHGLG00100011237	RAB11A	71	38.312
ENSHGLG00100014550	-	76	32.911	ENSHGLG00100018619	-	83	32.911
ENSHGLG00100014550	-	76	32.278	ENSHGLG00100008637	KRAS	83	32.278
ENSHGLG00100014550	-	74	34.416	ENSHGLG00100017177	-	71	32.370
ENSHGLG00100014550	-	100	89.904	ENSHGLG00100016679	RAB6B	100	89.904
ENSHGLG00100014550	-	74	35.714	ENSHGLG00100016830	RAB25	72	35.714
ENSHGLG00100014550	-	76	39.623	ENSHGLG00100000180	RAB39B	75	39.623
ENSHGLG00100014550	-	93	31.156	ENSHGLG00100019815	-	96	31.156
ENSHGLG00100014550	-	77	41.250	ENSHGLG00100012063	RAB15	77	41.250
ENSHGLG00100014550	-	98	36.493	ENSHGLG00100008816	-	92	36.493
ENSHGLG00100014550	-	85	33.523	ENSHGLG00100009117	-	87	33.523
ENSHGLG00100014550	-	86	33.696	ENSHGLG00100003290	RERG	90	33.696
ENSHGLG00100014550	-	94	36.893	ENSHGLG00100010554	RAB14	95	36.893
ENSHGLG00100014550	-	80	45.181	ENSHGLG00100012955	RAB5B	77	45.181
ENSHGLG00100014550	-	76	42.405	ENSHGLG00100013608	RAB13	78	42.405
ENSHGLG00100014550	-	74	35.404	ENSHGLG00100003190	RAB9B	79	35.404
ENSHGLG00100014550	-	94	38.384	ENSHGLG00100007994	RAB1A	95	38.384
ENSHGLG00100014550	-	75	32.919	ENSHGLG00100001635	-	69	32.919
ENSHGLG00100014550	-	97	35.096	ENSHGLG00100008802	RAB7A	100	35.096
ENSHGLG00100014550	-	77	40.741	ENSHGLG00100017982	RAB34	63	40.741
ENSHGLG00100014550	-	73	34.868	ENSHGLG00100015502	-	74	34.868
ENSHGLG00100014550	-	79	36.310	ENSHGLG00100018262	RAB24	82	37.725
ENSHGLG00100014550	-	95	38.537	ENSHGLG00100000293	RAB33A	86	38.537
ENSHGLG00100014550	-	93	37.879	ENSHGLG00100006292	RAB1B	97	37.879
ENSHGLG00100014550	-	74	38.961	ENSHGLG00100003638	RAB11B	71	38.961
ENSHGLG00100014550	-	95	35.821	ENSHGLG00100013089	-	97	35.821
ENSHGLG00100014550	-	74	39.610	ENSHGLG00100005945	-	65	39.610
ENSHGLG00100014550	-	76	31.176	ENSHGLG00100011809	RASL11A	70	31.176
ENSHGLG00100014550	-	79	39.157	ENSHGLG00100015609	RAB36	62	39.157
ENSHGLG00100014550	-	81	31.361	ENSHGLG00100015232	MRAS	76	32.704
ENSHGLG00100014550	-	81	41.667	ENSHGLG00100001213	RAB30	83	41.667
ENSHGLG00100014550	-	98	40.284	ENSHGLG00100007553	RAB5A	95	40.284
ENSHGLG00100014550	-	88	30.319	ENSHGLG00100016281	-	83	30.319
ENSHGLG00100014550	-	76	40.764	ENSHGLG00100011330	RAB31	80	40.764
ENSHGLG00100014550	-	94	35.294	ENSHGLG00100002929	RAB33B	86	36.275
ENSHGLG00100014550	-	76	43.038	ENSHGLG00100015803	RAB2A	83	40.000
ENSHGLG00100014550	-	82	42.353	ENSHGLG00100012557	-	78	42.353
ENSHGLG00100014550	-	54	35.714	ENSHGLG00100018197	-	72	31.579
ENSHGLG00100014550	-	76	32.278	ENSHGLG00100012888	HRAS	83	32.278

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100014550	-	100	98.077	ENSG00000175582	RAB6A	100	98.286	Homo_sapiens
ENSHGLG00100014550	-	99	88.406	ENSAPOG00000005731	rab6a	98	88.406	Acanthochromis_polyacanthus
ENSHGLG00100014550	-	100	98.558	ENSAMEG00000017285	RAB6A	82	98.558	Ailuropoda_melanoleuca
ENSHGLG00100014550	-	100	95.673	ENSACIG00000014605	rab6a	100	95.673	Amphilophus_citrinellus
ENSHGLG00100014550	-	100	94.231	ENSAOCG00000012277	-	100	94.231	Amphiprion_ocellaris
ENSHGLG00100014550	-	99	88.406	ENSATEG00000015992	rab41	98	88.406	Anabas_testudineus
ENSHGLG00100014550	-	100	95.192	ENSATEG00000012459	-	100	95.192	Anabas_testudineus
ENSHGLG00100014550	-	98	88.177	ENSACAG00000015304	-	96	87.864	Anolis_carolinensis
ENSHGLG00100014550	-	100	98.558	ENSANAG00000036364	RAB6A	100	98.558	Aotus_nancymaae
ENSHGLG00100014550	-	99	88.406	ENSACLG00000019423	rab41	98	88.406	Astatotilapia_calliptera
ENSHGLG00100014550	-	100	96.635	ENSAMXG00000032547	rab6a	100	96.635	Astyanax_mexicanus
ENSHGLG00100014550	-	99	82.212	ENSAMXG00000033216	rab41	98	82.212	Astyanax_mexicanus
ENSHGLG00100014550	-	100	98.558	ENSBTAG00000000025	RAB6A	100	98.558	Bos_taurus
ENSHGLG00100014550	-	98	75.728	WBGene00004269	rab-6.1	99	75.728	Caenorhabditis_elegans
ENSHGLG00100014550	-	100	98.558	ENSCJAG00000039039	RAB6A	100	98.558	Callithrix_jacchus
ENSHGLG00100014550	-	100	98.077	ENSCAFG00000028870	RAB6A	100	98.077	Canis_familiaris
ENSHGLG00100014550	-	100	98.558	ENSCAFG00020002206	RAB6A	100	98.558	Canis_lupus_dingo
ENSHGLG00100014550	-	100	98.558	ENSCHIG00000023957	RAB6A	100	98.558	Capra_hircus
ENSHGLG00100014550	-	100	98.077	ENSTSYG00000013951	RAB6A	100	98.077	Carlito_syrichta
ENSHGLG00100014550	-	100	98.558	ENSCATG00000012428	RAB6A	100	98.558	Cercocebus_atys
ENSHGLG00100014550	-	100	99.038	ENSCLAG00000015536	RAB6A	100	99.038	Chinchilla_lanigera
ENSHGLG00100014550	-	100	98.558	ENSCSAG00000004062	RAB6A	100	98.558	Chlorocebus_sabaeus
ENSHGLG00100014550	-	100	87.500	ENSCHOG00000000992	RAB6A	100	87.500	Choloepus_hoffmanni
ENSHGLG00100014550	-	100	97.596	ENSCPBG00000000041	RAB6A	100	97.596	Chrysemys_picta_bellii
ENSHGLG00100014550	-	98	85.990	ENSCING00000002960	-	99	85.990	Ciona_intestinalis
ENSHGLG00100014550	-	98	85.990	ENSCSAVG00000009128	-	99	85.990	Ciona_savignyi
ENSHGLG00100014550	-	100	98.558	ENSCANG00000029094	RAB6A	100	98.558	Colobus_angolensis_palliatus
ENSHGLG00100014550	-	100	98.558	ENSCGRG00001018153	Rab6a	100	98.558	Cricetulus_griseus_chok1gshd
ENSHGLG00100014550	-	99	88.889	ENSCSEG00000004941	rab41	98	88.889	Cynoglossus_semilaevis
ENSHGLG00100014550	-	100	95.673	ENSCVAG00000022249	rab6a	100	95.673	Cyprinodon_variegatus
ENSHGLG00100014550	-	99	87.923	ENSCVAG00000001618	rab41	98	87.923	Cyprinodon_variegatus
ENSHGLG00100014550	-	100	97.115	ENSDARG00000103714	rab6a	100	97.115	Danio_rerio
ENSHGLG00100014550	-	99	88.406	ENSDARG00000029885	rab41	98	88.406	Danio_rerio
ENSHGLG00100014550	-	100	98.077	ENSDNOG00000042746	RAB6A	100	98.077	Dasypus_novemcinctus
ENSHGLG00100014550	-	100	99.038	ENSDORG00000027784	Rab6a	100	99.038	Dipodomys_ordii
ENSHGLG00100014550	-	99	86.473	FBgn0015797	Rab6	99	86.473	Drosophila_melanogaster
ENSHGLG00100014550	-	100	72.596	ENSETEG00000009412	-	100	72.596	Echinops_telfairi
ENSHGLG00100014550	-	100	98.558	ENSEASG00005017944	RAB6A	100	98.558	Equus_asinus_asinus
ENSHGLG00100014550	-	100	98.558	ENSECAG00000022694	-	100	98.558	Equus_caballus
ENSHGLG00100014550	-	100	96.635	ENSELUG00000008876	rab6a	100	96.635	Esox_lucius
ENSHGLG00100014550	-	100	98.558	ENSFCAG00000023834	RAB6A	100	98.558	Felis_catus
ENSHGLG00100014550	-	100	97.596	ENSFALG00000008011	RAB6A	100	97.596	Ficedula_albicollis
ENSHGLG00100014550	-	100	99.038	ENSFDAG00000010948	-	100	99.038	Fukomys_damarensis
ENSHGLG00100014550	-	99	88.406	ENSGMOG00000004095	rab41	98	88.406	Gadus_morhua
ENSHGLG00100014550	-	99	91.748	ENSGALG00000026278	-	98	91.748	Gallus_gallus
ENSHGLG00100014550	-	100	98.077	ENSGALG00000017320	RAB6A	100	98.077	Gallus_gallus
ENSHGLG00100014550	-	99	87.440	ENSGAFG00000019872	rab41	98	87.440	Gambusia_affinis
ENSHGLG00100014550	-	100	95.673	ENSGAFG00000006356	rab6a	100	95.673	Gambusia_affinis
ENSHGLG00100014550	-	100	95.192	ENSGACG00000020356	rab6a	100	95.192	Gasterosteus_aculeatus
ENSHGLG00100014550	-	99	88.406	ENSGACG00000017153	rab41	98	88.406	Gasterosteus_aculeatus
ENSHGLG00100014550	-	100	97.596	ENSGAGG00000021701	RAB6A	100	97.596	Gopherus_agassizii
ENSHGLG00100014550	-	100	98.077	ENSGGOG00000010610	RAB6A	100	98.077	Gorilla_gorilla
ENSHGLG00100014550	-	100	95.192	ENSHBUG00000000890	rab6a	100	95.192	Haplochromis_burtoni
ENSHGLG00100014550	-	100	99.038	ENSHGLG00000008829	-	100	99.038	Heterocephalus_glaber_female
ENSHGLG00100014550	-	100	93.750	ENSHCOG00000006550	-	100	93.750	Hippocampus_comes
ENSHGLG00100014550	-	99	88.406	ENSHCOG00000004404	rab41	98	88.406	Hippocampus_comes
ENSHGLG00100014550	-	99	87.923	ENSIPUG00000019382	rab41	98	87.923	Ictalurus_punctatus
ENSHGLG00100014550	-	100	94.231	ENSIPUG00000021740	rab6a	100	94.231	Ictalurus_punctatus
ENSHGLG00100014550	-	100	98.558	ENSSTOG00000023497	RAB6A	100	98.558	Ictidomys_tridecemlineatus
ENSHGLG00100014550	-	80	99.398	ENSKMAG00000013146	-	86	99.398	Kryptolebias_marmoratus
ENSHGLG00100014550	-	100	93.750	ENSLBEG00000003748	rab6a	100	93.750	Labrus_bergylta
ENSHGLG00100014550	-	99	91.748	ENSLACG00000013980	rab41	98	91.748	Latimeria_chalumnae
ENSHGLG00100014550	-	100	93.750	ENSLACG00000005168	RAB6A	100	93.750	Latimeria_chalumnae
ENSHGLG00100014550	-	99	88.889	ENSLOCG00000015191	rab41	98	88.889	Lepisosteus_oculatus
ENSHGLG00100014550	-	100	98.558	ENSMFAG00000041027	RAB6A	100	98.558	Macaca_fascicularis
ENSHGLG00100014550	-	100	98.558	ENSMNEG00000029216	RAB6A	100	98.558	Macaca_nemestrina
ENSHGLG00100014550	-	100	98.558	ENSMLEG00000038771	RAB6A	100	98.558	Mandrillus_leucophaeus
ENSHGLG00100014550	-	99	87.440	ENSMAMG00000020859	rab41	98	87.440	Mastacembelus_armatus
ENSHGLG00100014550	-	100	95.192	ENSMAMG00000012488	rab6a	100	95.192	Mastacembelus_armatus
ENSHGLG00100014550	-	100	95.192	ENSMZEG00005023181	rab6a	100	95.192	Maylandia_zebra
ENSHGLG00100014550	-	100	98.558	ENSMICG00000031565	RAB6A	100	98.558	Microcebus_murinus
ENSHGLG00100014550	-	100	98.558	ENSMOCG00000014387	Rab6a	100	98.558	Microtus_ochrogaster
ENSHGLG00100014550	-	92	89.005	ENSMMOG00000001992	rab41	87	89.005	Mola_mola
ENSHGLG00100014550	-	100	90.865	ENSMMOG00000016209	rab6a	100	90.865	Mola_mola
ENSHGLG00100014550	-	100	97.596	ENSMODG00000007600	RAB6A	100	97.596	Monodelphis_domestica
ENSHGLG00100014550	-	99	88.406	ENSMALG00000010549	rab41	98	88.406	Monopterus_albus
ENSHGLG00100014550	-	100	94.712	ENSMALG00000020364	-	100	94.712	Monopterus_albus
ENSHGLG00100014550	-	100	98.558	MGP_CAROLIEiJ_G0030051	Rab6a	100	98.558	Mus_caroli
ENSHGLG00100014550	-	100	98.558	ENSMUSG00000030704	Rab6a	100	98.558	Mus_musculus
ENSHGLG00100014550	-	100	98.558	MGP_PahariEiJ_G0013273	Rab6a	100	98.558	Mus_pahari
ENSHGLG00100014550	-	100	98.558	MGP_SPRETEiJ_G0031162	Rab6a	100	98.558	Mus_spretus
ENSHGLG00100014550	-	100	98.558	ENSMPUG00000009724	RAB6A	100	98.558	Mustela_putorius_furo
ENSHGLG00100014550	-	100	98.077	ENSNGAG00000014566	Rab6a	100	98.077	Nannospalax_galili
ENSHGLG00100014550	-	100	95.192	ENSNBRG00000016716	rab6a	100	95.192	Neolamprologus_brichardi
ENSHGLG00100014550	-	99	88.406	ENSNBRG00000022702	rab41	98	88.406	Neolamprologus_brichardi
ENSHGLG00100014550	-	100	98.558	ENSNLEG00000017098	RAB6A	100	98.558	Nomascus_leucogenys
ENSHGLG00100014550	-	100	97.596	ENSMEUG00000010026	RAB6A	100	97.596	Notamacropus_eugenii
ENSHGLG00100014550	-	91	98.942	ENSOPRG00000010355	RAB6A	100	98.942	Ochotona_princeps
ENSHGLG00100014550	-	100	99.038	ENSODEG00000005942	RAB6A	100	99.038	Octodon_degus
ENSHGLG00100014550	-	100	95.192	ENSONIG00000004394	rab6a	100	95.192	Oreochromis_niloticus
ENSHGLG00100014550	-	100	98.558	ENSOCUG00000009297	RAB6A	100	98.558	Oryctolagus_cuniculus
ENSHGLG00100014550	-	100	94.231	ENSORLG00000026197	rab6a	100	94.231	Oryzias_latipes
ENSHGLG00100014550	-	100	86.512	ENSORLG00000000937	-	100	86.512	Oryzias_latipes
ENSHGLG00100014550	-	99	87.440	ENSORLG00020000604	rab41	98	87.440	Oryzias_latipes_hni
ENSHGLG00100014550	-	100	94.231	ENSORLG00020001816	rab6a	100	94.231	Oryzias_latipes_hni
ENSHGLG00100014550	-	100	94.231	ENSORLG00015006162	rab6a	100	94.231	Oryzias_latipes_hsok
ENSHGLG00100014550	-	100	94.231	ENSOMEG00000004379	-	100	94.231	Oryzias_melastigma
ENSHGLG00100014550	-	100	97.596	ENSOGAG00000027043	RAB6A	100	97.596	Otolemur_garnettii
ENSHGLG00100014550	-	100	98.558	ENSOARG00000007994	RAB6A	100	98.558	Ovis_aries
ENSHGLG00100014550	-	100	98.077	ENSPPAG00000011436	RAB6A	100	98.077	Pan_paniscus
ENSHGLG00100014550	-	100	98.558	ENSPPRG00000009543	RAB6A	100	98.558	Panthera_pardus
ENSHGLG00100014550	-	100	98.077	ENSPTRG00000044137	RAB6A	100	98.077	Pan_troglodytes
ENSHGLG00100014550	-	100	98.558	ENSPANG00000014356	RAB6A	100	98.558	Papio_anubis
ENSHGLG00100014550	-	99	87.864	ENSPKIG00000018584	rab41	98	87.864	Paramormyrops_kingsleyae
ENSHGLG00100014550	-	100	93.750	ENSPMGG00000010067	-	100	93.750	Periophthalmus_magnuspinnatus
ENSHGLG00100014550	-	100	95.673	ENSPFOG00000019509	rab6a	100	95.673	Poecilia_formosa
ENSHGLG00100014550	-	100	95.673	ENSPLAG00000019570	rab6a	100	95.673	Poecilia_latipinna
ENSHGLG00100014550	-	99	88.406	ENSPLAG00000000376	rab41	98	88.406	Poecilia_latipinna
ENSHGLG00100014550	-	99	88.406	ENSPMEG00000014170	rab41	98	88.406	Poecilia_mexicana
ENSHGLG00100014550	-	100	95.673	ENSPMEG00000003369	rab6a	100	95.673	Poecilia_mexicana
ENSHGLG00100014550	-	100	95.673	ENSPREG00000021505	rab6a	100	95.673	Poecilia_reticulata
ENSHGLG00100014550	-	100	98.077	ENSPPYG00000003663	RAB6A	100	98.077	Pongo_abelii
ENSHGLG00100014550	-	90	98.930	ENSPCAG00000006752	RAB6A	100	98.930	Procavia_capensis
ENSHGLG00100014550	-	100	98.558	ENSPCOG00000021991	RAB6A	100	98.558	Propithecus_coquereli
ENSHGLG00100014550	-	100	98.558	ENSPVAG00000017342	RAB6A	100	98.558	Pteropus_vampyrus
ENSHGLG00100014550	-	99	88.406	ENSPNYG00000013288	rab41	98	88.406	Pundamilia_nyererei
ENSHGLG00100014550	-	100	95.192	ENSPNYG00000020556	rab6a	100	95.192	Pundamilia_nyererei
ENSHGLG00100014550	-	99	89.372	ENSPNAG00000021737	rab41	98	89.372	Pygocentrus_nattereri
ENSHGLG00100014550	-	100	98.558	ENSRNOG00000018176	Rab6a	100	98.558	Rattus_norvegicus
ENSHGLG00100014550	-	100	98.558	ENSRBIG00000030390	RAB6A	100	98.558	Rhinopithecus_bieti
ENSHGLG00100014550	-	100	98.558	ENSRROG00000042103	RAB6A	100	98.558	Rhinopithecus_roxellana
ENSHGLG00100014550	-	100	83.173	ENSSBOG00000028389	RAB6A	100	83.173	Saimiri_boliviensis_boliviensis
ENSHGLG00100014550	-	100	96.635	ENSSFOG00015002077	rab6a	100	96.635	Scleropages_formosus
ENSHGLG00100014550	-	98	88.177	ENSSFOG00015004941	rab41	96	87.864	Scleropages_formosus
ENSHGLG00100014550	-	99	88.406	ENSSMAG00000015774	rab41	98	88.406	Scophthalmus_maximus
ENSHGLG00100014550	-	100	90.385	ENSSMAG00000017205	-	100	90.385	Scophthalmus_maximus
ENSHGLG00100014550	-	100	95.673	ENSSDUG00000013496	-	100	95.673	Seriola_dumerili
ENSHGLG00100014550	-	100	95.673	ENSSLDG00000015289	-	100	95.673	Seriola_lalandi_dorsalis
ENSHGLG00100014550	-	99	88.406	ENSSLDG00000022282	rab41	98	88.406	Seriola_lalandi_dorsalis
ENSHGLG00100014550	-	99	91.262	ENSSPUG00000001533	-	98	91.262	Sphenodon_punctatus
ENSHGLG00100014550	-	100	97.115	ENSSPUG00000017301	RAB6A	100	97.115	Sphenodon_punctatus
ENSHGLG00100014550	-	100	92.788	ENSSPAG00000001067	-	100	92.788	Stegastes_partitus
ENSHGLG00100014550	-	99	88.406	ENSSPAG00000006001	rab41	98	88.406	Stegastes_partitus
ENSHGLG00100014550	-	100	98.558	ENSSSCG00000014828	RAB6A	100	98.558	Sus_scrofa
ENSHGLG00100014550	-	100	97.596	ENSTGUG00000013470	RAB6A	100	97.596	Taeniopygia_guttata
ENSHGLG00100014550	-	99	88.406	ENSTRUG00000009223	rab41	98	88.406	Takifugu_rubripes
ENSHGLG00100014550	-	100	94.712	ENSTRUG00000023252	rab6a	100	94.712	Takifugu_rubripes
ENSHGLG00100014550	-	100	98.077	ENSTTRG00000005374	RAB6A	100	98.077	Tursiops_truncatus
ENSHGLG00100014550	-	100	95.169	ENSUMAG00000010248	RAB6A	100	95.169	Ursus_maritimus
ENSHGLG00100014550	-	100	98.558	ENSVVUG00000024550	RAB6A	100	98.558	Vulpes_vulpes
ENSHGLG00100014550	-	91	96.296	ENSXETG00000023200	rab6a	100	96.296	Xenopus_tropicalis
ENSHGLG00100014550	-	100	78.846	ENSXETG00000031363	-	100	78.846	Xenopus_tropicalis
ENSHGLG00100014550	-	100	95.673	ENSXCOG00000006259	rab6a	100	95.673	Xiphophorus_couchianus
ENSHGLG00100014550	-	100	95.673	ENSXMAG00000011903	rab6a	100	95.673	Xiphophorus_maculatus