EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00100014659 (Gene tree)
Gene ID: -
Gene Symbol: PARN
Alias: DAN
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 170987 bases
Position: chrJH168449.1:176223-347209
Accession: 101715275
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100019887	R3H	PF01424.22	9.2e-06	1	1
ENSHGLP00100019888	RNA_bind	PF08675.11	2.8e-32	1	1
ENSHGLP00100019887	RNA_bind	PF08675.11	3.4e-32	1	1
ENSHGLP00100019887	CAF1	PF04857.20	1.4e-89	1	1
ENSHGLP00100019888	CAF1	PF04857.20	8e-79	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100020099	-	4693	-	ENSHGLP00100019887	637 (aa)	XP_004855897	A0A0P6JER7
ENSHGLT00100020100	-	1758	-	ENSHGLP00100019888	585 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100014659's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100014659's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100014659	PARN	100	90.923	ENSG00000140694	PARN	100	98.305	Homo_sapiens
ENSHGLG00100014659	PARN	100	88.889	ENSAMEG00000011208	PARN	100	88.889	Ailuropoda_melanoleuca
ENSHGLG00100014659	PARN	83	75.187	ENSACIG00000000619	parn	83	75.187	Amphilophus_citrinellus
ENSHGLG00100014659	PARN	94	69.920	ENSAOCG00000003465	parn	90	69.920	Amphiprion_ocellaris
ENSHGLG00100014659	PARN	74	76.956	ENSAPEG00000010661	parn	91	76.956	Amphiprion_percula
ENSHGLG00100014659	PARN	99	68.356	ENSATEG00000004661	parn	84	73.469	Anabas_testudineus
ENSHGLG00100014659	PARN	99	82.120	ENSAPLG00000013914	PARN	99	82.120	Anas_platyrhynchos
ENSHGLG00100014659	PARN	100	75.692	ENSACAG00000004973	PARN	100	76.570	Anolis_carolinensis
ENSHGLG00100014659	PARN	100	89.358	ENSANAG00000031516	PARN	100	98.305	Aotus_nancymaae
ENSHGLG00100014659	PARN	91	73.459	ENSACLG00000004742	parn	84	73.459	Astatotilapia_calliptera
ENSHGLG00100014659	PARN	91	70.466	ENSAMXG00000012390	parn	93	70.466	Astyanax_mexicanus
ENSHGLG00100014659	PARN	100	87.461	ENSBTAG00000018097	PARN	100	89.775	Bos_taurus
ENSHGLG00100014659	PARN	100	90.297	ENSCJAG00000015866	PARN	100	98.305	Callithrix_jacchus
ENSHGLG00100014659	PARN	100	88.871	ENSCAFG00000018795	PARN	100	88.871	Canis_familiaris
ENSHGLG00100014659	PARN	100	89.185	ENSCAFG00020024126	PARN	100	89.185	Canis_lupus_dingo
ENSHGLG00100014659	PARN	100	90.282	ENSCHIG00000018143	PARN	100	90.282	Capra_hircus
ENSHGLG00100014659	PARN	73	64.241	ENSCAPG00000007984	PARN	78	64.241	Cavia_aperea
ENSHGLG00100014659	PARN	100	93.878	ENSCPOG00000002263	PARN	100	93.878	Cavia_porcellus
ENSHGLG00100014659	PARN	100	90.141	ENSCCAG00000030367	PARN	100	98.305	Cebus_capucinus
ENSHGLG00100014659	PARN	100	81.534	ENSCATG00000041368	PARN	100	98.305	Cercocebus_atys
ENSHGLG00100014659	PARN	52	35.172	ENSCATG00000033196	PNLDC1	70	35.172	Cercocebus_atys
ENSHGLG00100014659	PARN	100	93.721	ENSCLAG00000015406	PARN	99	93.721	Chinchilla_lanigera
ENSHGLG00100014659	PARN	100	90.767	ENSCSAG00000008142	PARN	100	90.767	Chlorocebus_sabaeus
ENSHGLG00100014659	PARN	99	72.583	ENSCHOG00000007014	PARN	100	72.583	Choloepus_hoffmanni
ENSHGLG00100014659	PARN	88	82.888	ENSCPBG00000006609	PARN	97	82.900	Chrysemys_picta_bellii
ENSHGLG00100014659	PARN	80	44.090	ENSCING00000010142	-	99	44.090	Ciona_intestinalis
ENSHGLG00100014659	PARN	100	79.331	ENSCANG00000028849	-	100	98.305	Colobus_angolensis_palliatus
ENSHGLG00100014659	PARN	100	85.312	ENSCGRG00001012096	Parn	100	85.312	Cricetulus_griseus_chok1gshd
ENSHGLG00100014659	PARN	100	85.312	ENSCGRG00000004939	Parn	100	85.312	Cricetulus_griseus_crigri
ENSHGLG00100014659	PARN	96	69.118	ENSCSEG00000002064	parn	100	65.158	Cynoglossus_semilaevis
ENSHGLG00100014659	PARN	83	77.612	ENSCVAG00000014848	parn	79	77.612	Cyprinodon_variegatus
ENSHGLG00100014659	PARN	100	63.664	ENSDARG00000102634	parn	100	63.359	Danio_rerio
ENSHGLG00100014659	PARN	100	88.871	ENSDNOG00000000833	PARN	98	92.043	Dasypus_novemcinctus
ENSHGLG00100014659	PARN	74	90.494	ENSETEG00000014828	-	78	90.494	Echinops_telfairi
ENSHGLG00100014659	PARN	100	89.185	ENSEASG00005011400	PARN	100	89.185	Equus_asinus_asinus
ENSHGLG00100014659	PARN	100	89.028	ENSECAG00000017792	PARN	100	89.028	Equus_caballus
ENSHGLG00100014659	PARN	86	82.805	ENSEEUG00000010370	PARN	86	82.805	Erinaceus_europaeus
ENSHGLG00100014659	PARN	90	71.256	ENSELUG00000013139	parn	75	71.256	Esox_lucius
ENSHGLG00100014659	PARN	100	89.969	ENSFCAG00000044961	PARN	100	94.915	Felis_catus
ENSHGLG00100014659	PARN	99	81.616	ENSFALG00000003911	PARN	98	81.616	Ficedula_albicollis
ENSHGLG00100014659	PARN	58	31.414	ENSFALG00000012081	PNLDC1	69	31.414	Ficedula_albicollis
ENSHGLG00100014659	PARN	100	94.976	ENSFDAG00000009234	PARN	100	94.976	Fukomys_damarensis
ENSHGLG00100014659	PARN	92	66.113	ENSFHEG00000013738	parn	92	77.966	Fundulus_heteroclitus
ENSHGLG00100014659	PARN	83	75.933	ENSGMOG00000003231	parn	97	75.933	Gadus_morhua
ENSHGLG00100014659	PARN	100	80.220	ENSGALG00000003091	PARN	100	80.220	Gallus_gallus
ENSHGLG00100014659	PARN	90	73.368	ENSGAFG00000011061	parn	84	72.727	Gambusia_affinis
ENSHGLG00100014659	PARN	100	67.337	ENSGACG00000019501	parn	100	67.802	Gasterosteus_aculeatus
ENSHGLG00100014659	PARN	55	74.221	ENSGAGG00000023281	PARN	83	77.607	Gopherus_agassizii
ENSHGLG00100014659	PARN	97	91.143	ENSGGOG00000025224	PARN	100	98.305	Gorilla_gorilla
ENSHGLG00100014659	PARN	91	73.459	ENSHBUG00000017906	parn	90	76.164	Haplochromis_burtoni
ENSHGLG00100014659	PARN	100	100.000	ENSHGLG00000010886	PARN	100	100.000	Heterocephalus_glaber_female
ENSHGLG00100014659	PARN	87	70.390	ENSHCOG00000008683	parn	97	70.390	Hippocampus_comes
ENSHGLG00100014659	PARN	90	61.224	ENSIPUG00000012401	parn	85	61.039	Ictalurus_punctatus
ENSHGLG00100014659	PARN	100	90.267	ENSSTOG00000007519	PARN	100	90.267	Ictidomys_tridecemlineatus
ENSHGLG00100014659	PARN	100	86.207	ENSJJAG00000023049	Parn	100	86.207	Jaculus_jaculus
ENSHGLG00100014659	PARN	91	73.162	ENSKMAG00000009462	parn	83	73.162	Kryptolebias_marmoratus
ENSHGLG00100014659	PARN	91	72.542	ENSLBEG00000009167	parn	90	72.542	Labrus_bergylta
ENSHGLG00100014659	PARN	79	78.571	ENSLACG00000004207	PARN	100	77.594	Latimeria_chalumnae
ENSHGLG00100014659	PARN	97	72.123	ENSLOCG00000000715	parn	89	72.123	Lepisosteus_oculatus
ENSHGLG00100014659	PARN	100	89.342	ENSLAFG00000015036	PARN	100	89.342	Loxodonta_africana
ENSHGLG00100014659	PARN	100	85.781	ENSMFAG00000044852	PARN	100	98.305	Macaca_fascicularis
ENSHGLG00100014659	PARN	100	90.610	ENSMMUG00000018849	PARN	100	98.305	Macaca_mulatta
ENSHGLG00100014659	PARN	100	90.767	ENSMNEG00000045108	PARN	100	98.305	Macaca_nemestrina
ENSHGLG00100014659	PARN	100	90.610	ENSMLEG00000031743	PARN	100	98.305	Mandrillus_leucophaeus
ENSHGLG00100014659	PARN	90	73.057	ENSMAMG00000006939	parn	82	73.057	Mastacembelus_armatus
ENSHGLG00100014659	PARN	91	73.459	ENSMZEG00005013590	parn	90	75.746	Maylandia_zebra
ENSHGLG00100014659	PARN	95	80.395	ENSMGAG00000001004	PARN	95	80.395	Meleagris_gallopavo
ENSHGLG00100014659	PARN	100	79.321	ENSMAUG00000008025	Parn	100	79.321	Mesocricetus_auratus
ENSHGLG00100014659	PARN	100	90.909	ENSMICG00000016053	PARN	100	96.610	Microcebus_murinus
ENSHGLG00100014659	PARN	78	90.081	ENSMOCG00000022211	Parn	100	90.081	Microtus_ochrogaster
ENSHGLG00100014659	PARN	83	75.327	ENSMMOG00000011333	parn	87	75.327	Mola_mola
ENSHGLG00100014659	PARN	78	91.935	ENSMODG00000004915	PARN	99	91.935	Monodelphis_domestica
ENSHGLG00100014659	PARN	95	67.727	ENSMALG00000019426	parn	91	78.026	Monopterus_albus
ENSHGLG00100014659	PARN	100	85.266	MGP_CAROLIEiJ_G0020466	Parn	100	85.266	Mus_caroli
ENSHGLG00100014659	PARN	100	84.953	ENSMUSG00000022685	Parn	100	91.463	Mus_musculus
ENSHGLG00100014659	PARN	100	84.639	MGP_PahariEiJ_G0016172	Parn	100	84.639	Mus_pahari
ENSHGLG00100014659	PARN	100	84.953	MGP_SPRETEiJ_G0021361	Parn	100	84.953	Mus_spretus
ENSHGLG00100014659	PARN	100	89.342	ENSMPUG00000014464	PARN	100	89.342	Mustela_putorius_furo
ENSHGLG00100014659	PARN	77	91.700	ENSMLUG00000005414	PARN	100	91.700	Myotis_lucifugus
ENSHGLG00100014659	PARN	91	71.256	ENSNBRG00000006805	parn	98	71.256	Neolamprologus_brichardi
ENSHGLG00100014659	PARN	100	90.767	ENSNLEG00000010241	PARN	100	98.305	Nomascus_leucogenys
ENSHGLG00100014659	PARN	99	60.063	ENSMEUG00000008178	-	100	60.063	Notamacropus_eugenii
ENSHGLG00100014659	PARN	99	84.786	ENSOPRG00000012187	PARN	100	84.786	Ochotona_princeps
ENSHGLG00100014659	PARN	100	85.469	ENSODEG00000001617	PARN	100	85.469	Octodon_degus
ENSHGLG00100014659	PARN	100	68.502	ENSONIG00000000151	parn	100	68.654	Oreochromis_niloticus
ENSHGLG00100014659	PARN	59	80.688	ENSOANG00000020155	-	97	80.688	Ornithorhynchus_anatinus
ENSHGLG00100014659	PARN	99	89.873	ENSOCUG00000000322	PARN	99	89.873	Oryctolagus_cuniculus
ENSHGLG00100014659	PARN	98	68.262	ENSORLG00020010313	parn	85	71.966	Oryzias_latipes_hni
ENSHGLG00100014659	PARN	98	67.943	ENSORLG00015000300	parn	85	71.624	Oryzias_latipes_hsok
ENSHGLG00100014659	PARN	99	66.769	ENSOMEG00000019555	parn	97	67.873	Oryzias_melastigma
ENSHGLG00100014659	PARN	77	91.919	ENSOGAG00000014626	PARN	100	91.919	Otolemur_garnettii
ENSHGLG00100014659	PARN	77	95.142	ENSOARG00000007574	PARN	100	95.142	Ovis_aries
ENSHGLG00100014659	PARN	100	90.923	ENSPPAG00000031438	PARN	100	98.305	Pan_paniscus
ENSHGLG00100014659	PARN	100	89.812	ENSPPRG00000018583	PARN	100	94.915	Panthera_pardus
ENSHGLG00100014659	PARN	100	89.812	ENSPTIG00000012135	PARN	100	94.915	Panthera_tigris_altaica
ENSHGLG00100014659	PARN	100	90.610	ENSPTRG00000007792	PARN	100	98.305	Pan_troglodytes
ENSHGLG00100014659	PARN	100	87.637	ENSPANG00000020099	PARN	100	98.305	Papio_anubis
ENSHGLG00100014659	PARN	99	65.062	ENSPKIG00000022807	parn	99	64.651	Paramormyrops_kingsleyae
ENSHGLG00100014659	PARN	97	82.154	ENSPSIG00000014804	PARN	100	80.763	Pelodiscus_sinensis
ENSHGLG00100014659	PARN	81	76.070	ENSPMGG00000014431	parn	77	72.383	Periophthalmus_magnuspinnatus
ENSHGLG00100014659	PARN	100	83.099	ENSPEMG00000018439	Parn	100	83.099	Peromyscus_maniculatus_bairdii
ENSHGLG00100014659	PARN	81	66.859	ENSPMAG00000003956	parn	98	66.859	Petromyzon_marinus
ENSHGLG00100014659	PARN	66	84.161	ENSPCIG00000001259	PARN	91	89.831	Phascolarctos_cinereus
ENSHGLG00100014659	PARN	91	73.070	ENSPFOG00000012823	parn	84	72.635	Poecilia_formosa
ENSHGLG00100014659	PARN	91	73.242	ENSPLAG00000006395	parn	84	72.804	Poecilia_latipinna
ENSHGLG00100014659	PARN	91	73.242	ENSPMEG00000007711	parn	84	72.973	Poecilia_mexicana
ENSHGLG00100014659	PARN	91	72.899	ENSPREG00000000147	parn	84	72.635	Poecilia_reticulata
ENSHGLG00100014659	PARN	100	90.172	ENSPPYG00000007123	PARN	100	90.172	Pongo_abelii
ENSHGLG00100014659	PARN	95	78.678	ENSPCAG00000001741	PARN	100	78.678	Procavia_capensis
ENSHGLG00100014659	PARN	100	88.088	ENSPCOG00000019292	PARN	100	96.610	Propithecus_coquereli
ENSHGLG00100014659	PARN	99	85.578	ENSPVAG00000002547	PARN	100	85.578	Pteropus_vampyrus
ENSHGLG00100014659	PARN	91	73.459	ENSPNYG00000006835	parn	90	73.184	Pundamilia_nyererei
ENSHGLG00100014659	PARN	78	74.950	ENSPNAG00000018905	parn	83	74.950	Pygocentrus_nattereri
ENSHGLG00100014659	PARN	100	81.860	ENSRNOG00000002912	Parn	97	89.796	Rattus_norvegicus
ENSHGLG00100014659	PARN	52	86.486	ENSRBIG00000018726	PARN	100	86.486	Rhinopithecus_bieti
ENSHGLG00100014659	PARN	52	86.486	ENSRROG00000011162	-	100	86.486	Rhinopithecus_roxellana
ENSHGLG00100014659	PARN	100	88.576	ENSSBOG00000034726	PARN	100	98.305	Saimiri_boliviensis_boliviensis
ENSHGLG00100014659	PARN	65	91.367	ENSSHAG00000008493	PARN	93	91.367	Sarcophilus_harrisii
ENSHGLG00100014659	PARN	96	70.540	ENSSFOG00015014165	parn	88	76.083	Scleropages_formosus
ENSHGLG00100014659	PARN	90	71.157	ENSSMAG00000000685	parn	100	58.529	Scophthalmus_maximus
ENSHGLG00100014659	PARN	91	71.959	ENSSDUG00000014555	parn	84	71.959	Seriola_dumerili
ENSHGLG00100014659	PARN	91	76.298	ENSSARG00000014339	PARN	100	76.298	Sorex_araneus
ENSHGLG00100014659	PARN	100	82.915	ENSSPUG00000007719	PARN	100	82.915	Sphenodon_punctatus
ENSHGLG00100014659	PARN	94	70.720	ENSSPAG00000007095	parn	91	70.720	Stegastes_partitus
ENSHGLG00100014659	PARN	100	88.401	ENSSSCG00000007878	PARN	89	88.401	Sus_scrofa
ENSHGLG00100014659	PARN	55	31.944	ENSTGUG00000011418	PNLDC1	68	31.944	Taeniopygia_guttata
ENSHGLG00100014659	PARN	99	81.487	ENSTGUG00000004971	PARN	99	81.487	Taeniopygia_guttata
ENSHGLG00100014659	PARN	100	67.337	ENSTNIG00000008252	parn	100	67.647	Tetraodon_nigroviridis
ENSHGLG00100014659	PARN	91	75.993	ENSTBEG00000010407	PARN	100	75.993	Tupaia_belangeri
ENSHGLG00100014659	PARN	99	84.945	ENSTTRG00000002843	PARN	100	84.945	Tursiops_truncatus
ENSHGLG00100014659	PARN	68	81.651	ENSUAMG00000008283	PARN	90	81.651	Ursus_americanus
ENSHGLG00100014659	PARN	100	89.342	ENSUMAG00000004527	PARN	100	89.342	Ursus_maritimus
ENSHGLG00100014659	PARN	96	86.482	ENSVPAG00000008968	PARN	100	86.482	Vicugna_pacos
ENSHGLG00100014659	PARN	100	89.342	ENSVVUG00000019509	PARN	100	89.342	Vulpes_vulpes
ENSHGLG00100014659	PARN	100	73.125	ENSXETG00000010994	parn	100	81.559	Xenopus_tropicalis
ENSHGLG00100014659	PARN	90	69.430	ENSXCOG00000015990	parn	96	68.866	Xiphophorus_couchianus
ENSHGLG00100014659	PARN	92	72.175	ENSXMAG00000014783	parn	84	72.175	Xiphophorus_maculatus