EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00100015169 (Gene tree)
Gene ID: -
Gene Symbol: TARBP1
Alias: TRM3|TRMT3|TRP-185
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 66253 bases
Position: chrJH165641.1:42674-108926
Accession: 11568
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100020582	SpoU_methylase	PF00588.19	4e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100020801	TARBP1-201	4332	-	ENSHGLP00100020582	1443 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100015169's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100015169's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100015169	TARBP1	99	78.551	ENSG00000059588	TARBP1	95	78.764	Homo_sapiens
ENSHGLG00100015169	TARBP1	95	45.416	ENSAPOG00000016419	si:dkey-85a20.4	85	45.442	Acanthochromis_polyacanthus
ENSHGLG00100015169	TARBP1	94	79.517	ENSAMEG00000003359	TARBP1	99	79.517	Ailuropoda_melanoleuca
ENSHGLG00100015169	TARBP1	94	45.776	ENSATEG00000020266	si:dkey-85a20.4	85	45.557	Anabas_testudineus
ENSHGLG00100015169	TARBP1	93	64.500	ENSAPLG00000007666	TARBP1	99	65.673	Anas_platyrhynchos
ENSHGLG00100015169	TARBP1	93	59.823	ENSACAG00000001142	TARBP1	86	59.508	Anolis_carolinensis
ENSHGLG00100015169	TARBP1	99	75.683	ENSANAG00000022031	TARBP1	97	75.159	Aotus_nancymaae
ENSHGLG00100015169	TARBP1	99	78.412	ENSBTAG00000004517	TARBP1	95	76.934	Bos_taurus
ENSHGLG00100015169	TARBP1	99	78.489	ENSCJAG00000018155	TARBP1	96	78.489	Callithrix_jacchus
ENSHGLG00100015169	TARBP1	96	78.348	ENSCAFG00000011533	TARBP1	99	78.490	Canis_familiaris
ENSHGLG00100015169	TARBP1	99	80.000	ENSCAFG00020027141	TARBP1	98	76.955	Canis_lupus_dingo
ENSHGLG00100015169	TARBP1	99	77.201	ENSCHIG00000011437	TARBP1	93	77.489	Capra_hircus
ENSHGLG00100015169	TARBP1	90	79.218	ENSTSYG00000010382	TARBP1	97	79.218	Carlito_syrichta
ENSHGLG00100015169	TARBP1	88	78.947	ENSCAPG00000010831	TARBP1	100	78.947	Cavia_aperea
ENSHGLG00100015169	TARBP1	100	91.304	ENSCPOG00000013995	TARBP1	94	90.355	Cavia_porcellus
ENSHGLG00100015169	TARBP1	99	78.158	ENSCCAG00000037278	TARBP1	94	78.332	Cebus_capucinus
ENSHGLG00100015169	TARBP1	99	78.141	ENSCATG00000011754	TARBP1	96	78.141	Cercocebus_atys
ENSHGLG00100015169	TARBP1	93	90.352	ENSCLAG00000003655	TARBP1	99	90.658	Chinchilla_lanigera
ENSHGLG00100015169	TARBP1	88	78.833	ENSCSAG00000010100	TARBP1	99	78.833	Chlorocebus_sabaeus
ENSHGLG00100015169	TARBP1	93	66.484	ENSCPBG00000005587	TARBP1	94	69.697	Chrysemys_picta_bellii
ENSHGLG00100015169	TARBP1	94	79.485	ENSCANG00000034343	TARBP1	99	79.485	Colobus_angolensis_palliatus
ENSHGLG00100015169	TARBP1	99	76.822	ENSCGRG00001016690	Tarbp1	97	76.822	Cricetulus_griseus_chok1gshd
ENSHGLG00100015169	TARBP1	99	76.724	ENSCGRG00000016893	Tarbp1	99	76.724	Cricetulus_griseus_crigri
ENSHGLG00100015169	TARBP1	95	41.875	ENSCSEG00000005255	si:dkey-85a20.4	81	48.991	Cynoglossus_semilaevis
ENSHGLG00100015169	TARBP1	93	45.727	ENSDARG00000079055	si:dkey-85a20.4	99	54.844	Danio_rerio
ENSHGLG00100015169	TARBP1	99	76.125	ENSDNOG00000008637	TARBP1	96	76.401	Dasypus_novemcinctus
ENSHGLG00100015169	TARBP1	89	74.614	ENSDORG00000007984	Tarbp1	100	74.691	Dipodomys_ordii
ENSHGLG00100015169	TARBP1	99	79.075	ENSEASG00005000252	TARBP1	94	79.670	Equus_asinus_asinus
ENSHGLG00100015169	TARBP1	99	79.315	ENSECAG00000023673	TARBP1	93	82.338	Equus_caballus
ENSHGLG00100015169	TARBP1	94	44.508	ENSELUG00000012193	si:dkey-85a20.4	86	44.579	Esox_lucius
ENSHGLG00100015169	TARBP1	99	76.098	ENSFCAG00000014183	TARBP1	95	75.177	Felis_catus
ENSHGLG00100015169	TARBP1	89	65.798	ENSFALG00000013565	TARBP1	99	65.649	Ficedula_albicollis
ENSHGLG00100015169	TARBP1	89	88.676	ENSFDAG00000001308	TARBP1	100	88.906	Fukomys_damarensis
ENSHGLG00100015169	TARBP1	98	37.952	ENSFHEG00000007565	si:dkey-85a20.4	80	54.902	Fundulus_heteroclitus
ENSHGLG00100015169	TARBP1	93	43.551	ENSGMOG00000004549	si:dkey-85a20.4	98	43.623	Gadus_morhua
ENSHGLG00100015169	TARBP1	91	70.948	ENSGALG00000011000	TARBP1	94	67.847	Gallus_gallus
ENSHGLG00100015169	TARBP1	94	43.625	ENSGAFG00000007387	si:dkey-85a20.4	83	43.696	Gambusia_affinis
ENSHGLG00100015169	TARBP1	94	45.409	ENSGACG00000005865	si:dkey-85a20.4	99	45.148	Gasterosteus_aculeatus
ENSHGLG00100015169	TARBP1	99	67.789	ENSGAGG00000012102	TARBP1	98	65.702	Gopherus_agassizii
ENSHGLG00100015169	TARBP1	94	77.697	ENSGGOG00000022879	TARBP1	99	77.697	Gorilla_gorilla
ENSHGLG00100015169	TARBP1	95	45.813	ENSHBUG00000008877	si:dkey-85a20.4	85	45.813	Haplochromis_burtoni
ENSHGLG00100015169	TARBP1	100	98.000	ENSHGLG00000011592	TARBP1	96	98.000	Heterocephalus_glaber_female
ENSHGLG00100015169	TARBP1	92	43.800	ENSIPUG00000005249	si:dkey-85a20.4	81	44.314	Ictalurus_punctatus
ENSHGLG00100015169	TARBP1	100	72.891	ENSSTOG00000032291	TARBP1	99	72.891	Ictidomys_tridecemlineatus
ENSHGLG00100015169	TARBP1	100	74.363	ENSJJAG00000017840	Tarbp1	99	74.363	Jaculus_jaculus
ENSHGLG00100015169	TARBP1	73	46.720	ENSKMAG00000017546	si:dkey-85a20.4	75	47.122	Kryptolebias_marmoratus
ENSHGLG00100015169	TARBP1	75	50.455	ENSLBEG00000012132	si:dkey-85a20.4	80	50.585	Labrus_bergylta
ENSHGLG00100015169	TARBP1	94	53.768	ENSLACG00000004337	TARBP1	84	53.768	Latimeria_chalumnae
ENSHGLG00100015169	TARBP1	97	49.225	ENSLOCG00000016214	si:dkey-85a20.4	86	49.225	Lepisosteus_oculatus
ENSHGLG00100015169	TARBP1	95	77.754	ENSLAFG00000011394	TARBP1	91	76.409	Loxodonta_africana
ENSHGLG00100015169	TARBP1	99	75.515	ENSMFAG00000041068	TARBP1	97	75.515	Macaca_fascicularis
ENSHGLG00100015169	TARBP1	99	75.515	ENSMMUG00000021703	TARBP1	96	75.515	Macaca_mulatta
ENSHGLG00100015169	TARBP1	99	78.211	ENSMNEG00000045002	TARBP1	96	78.211	Macaca_nemestrina
ENSHGLG00100015169	TARBP1	93	79.188	ENSMLEG00000044182	TARBP1	99	79.188	Mandrillus_leucophaeus
ENSHGLG00100015169	TARBP1	94	45.494	ENSMAMG00000021760	si:dkey-85a20.4	84	45.494	Mastacembelus_armatus
ENSHGLG00100015169	TARBP1	95	45.742	ENSMZEG00005005751	si:dkey-85a20.4	85	45.742	Maylandia_zebra
ENSHGLG00100015169	TARBP1	100	77.163	ENSMAUG00000020968	Tarbp1	96	77.163	Mesocricetus_auratus
ENSHGLG00100015169	TARBP1	99	71.614	ENSMICG00000015280	TARBP1	92	71.614	Microcebus_murinus
ENSHGLG00100015169	TARBP1	100	74.481	ENSMOCG00000004128	Tarbp1	98	74.619	Microtus_ochrogaster
ENSHGLG00100015169	TARBP1	94	43.714	ENSMMOG00000007795	si:dkey-85a20.4	85	43.714	Mola_mola
ENSHGLG00100015169	TARBP1	99	71.007	ENSMODG00000008504	TARBP1	95	69.327	Monodelphis_domestica
ENSHGLG00100015169	TARBP1	94	45.000	ENSMALG00000002916	si:dkey-85a20.4	85	45.298	Monopterus_albus
ENSHGLG00100015169	TARBP1	99	74.619	MGP_CAROLIEiJ_G0031729	Tarbp1	98	74.619	Mus_caroli
ENSHGLG00100015169	TARBP1	99	74.205	ENSMUSG00000090290	Tarbp1	97	74.341	Mus_musculus
ENSHGLG00100015169	TARBP1	99	74.879	MGP_PahariEiJ_G0023326	Tarbp1	97	74.844	Mus_pahari
ENSHGLG00100015169	TARBP1	99	74.669	MGP_SPRETEiJ_G0032846	Tarbp1	97	74.532	Mus_spretus
ENSHGLG00100015169	TARBP1	86	78.029	ENSMPUG00000002802	TARBP1	99	78.029	Mustela_putorius_furo
ENSHGLG00100015169	TARBP1	94	71.377	ENSMLUG00000002414	TARBP1	99	71.761	Myotis_lucifugus
ENSHGLG00100015169	TARBP1	99	78.607	ENSNLEG00000002518	TARBP1	94	78.820	Nomascus_leucogenys
ENSHGLG00100015169	TARBP1	64	72.128	ENSMEUG00000011370	-	62	72.128	Notamacropus_eugenii
ENSHGLG00100015169	TARBP1	78	79.699	ENSOPRG00000013822	TARBP1	70	79.699	Ochotona_princeps
ENSHGLG00100015169	TARBP1	100	91.304	ENSODEG00000005238	TARBP1	96	91.304	Octodon_degus
ENSHGLG00100015169	TARBP1	94	45.435	ENSONIG00000009789	si:dkey-85a20.4	99	45.053	Oreochromis_niloticus
ENSHGLG00100015169	TARBP1	99	79.389	ENSOCUG00000017418	TARBP1	94	79.389	Oryctolagus_cuniculus
ENSHGLG00100015169	TARBP1	95	43.657	ENSORLG00000010529	si:dkey-85a20.4	85	43.728	Oryzias_latipes
ENSHGLG00100015169	TARBP1	95	43.626	ENSORLG00020019264	si:dkey-85a20.4	85	43.768	Oryzias_latipes_hni
ENSHGLG00100015169	TARBP1	95	43.414	ENSORLG00015003276	si:dkey-85a20.4	85	43.444	Oryzias_latipes_hsok
ENSHGLG00100015169	TARBP1	99	76.835	ENSOGAG00000002379	TARBP1	94	76.835	Otolemur_garnettii
ENSHGLG00100015169	TARBP1	99	74.350	ENSOARG00000003434	TARBP1	99	74.750	Ovis_aries
ENSHGLG00100015169	TARBP1	94	79.868	ENSPPAG00000028097	TARBP1	99	79.868	Pan_paniscus
ENSHGLG00100015169	TARBP1	99	75.054	ENSPPRG00000013561	TARBP1	99	73.688	Panthera_pardus
ENSHGLG00100015169	TARBP1	92	78.657	ENSPTIG00000009281	TARBP1	99	78.657	Panthera_tigris_altaica
ENSHGLG00100015169	TARBP1	99	78.536	ENSPTRG00000002124	TARBP1	94	78.749	Pan_troglodytes
ENSHGLG00100015169	TARBP1	99	78.566	ENSPANG00000021933	TARBP1	96	78.566	Papio_anubis
ENSHGLG00100015169	TARBP1	95	47.067	ENSPKIG00000016716	si:dkey-85a20.4	85	47.067	Paramormyrops_kingsleyae
ENSHGLG00100015169	TARBP1	88	67.186	ENSPSIG00000010699	TARBP1	99	67.186	Pelodiscus_sinensis
ENSHGLG00100015169	TARBP1	99	75.116	ENSPEMG00000006888	Tarbp1	99	74.983	Peromyscus_maniculatus_bairdii
ENSHGLG00100015169	TARBP1	90	81.373	ENSPCIG00000029710	TARBP1	96	81.373	Phascolarctos_cinereus
ENSHGLG00100015169	TARBP1	95	43.750	ENSPFOG00000013020	si:dkey-85a20.4	99	43.821	Poecilia_formosa
ENSHGLG00100015169	TARBP1	95	43.808	ENSPLAG00000006044	si:dkey-85a20.4	85	43.949	Poecilia_latipinna
ENSHGLG00100015169	TARBP1	95	43.737	ENSPMEG00000017857	si:dkey-85a20.4	85	43.808	Poecilia_mexicana
ENSHGLG00100015169	TARBP1	95	44.020	ENSPREG00000022753	si:dkey-85a20.4	85	44.161	Poecilia_reticulata
ENSHGLG00100015169	TARBP1	90	78.710	ENSPPYG00000000102	TARBP1	94	78.710	Pongo_abelii
ENSHGLG00100015169	TARBP1	84	86.667	ENSPCAG00000004808	TARBP1	84	86.667	Procavia_capensis
ENSHGLG00100015169	TARBP1	99	76.512	ENSPCOG00000005666	TARBP1	96	76.512	Propithecus_coquereli
ENSHGLG00100015169	TARBP1	99	65.741	ENSPVAG00000014798	TARBP1	92	65.741	Pteropus_vampyrus
ENSHGLG00100015169	TARBP1	95	44.295	ENSPNYG00000019135	si:dkey-85a20.4	85	44.295	Pundamilia_nyererei
ENSHGLG00100015169	TARBP1	99	72.583	ENSRNOG00000053574	Tarbp1	94	72.583	Rattus_norvegicus
ENSHGLG00100015169	TARBP1	99	71.826	ENSRBIG00000043362	TARBP1	99	71.826	Rhinopithecus_bieti
ENSHGLG00100015169	TARBP1	99	77.928	ENSRROG00000029527	TARBP1	96	77.928	Rhinopithecus_roxellana
ENSHGLG00100015169	TARBP1	99	76.276	ENSSBOG00000034503	TARBP1	99	76.276	Saimiri_boliviensis_boliviensis
ENSHGLG00100015169	TARBP1	93	71.460	ENSSHAG00000000013	TARBP1	99	71.460	Sarcophilus_harrisii
ENSHGLG00100015169	TARBP1	94	45.494	ENSSFOG00015002660	si:dkey-85a20.4	97	46.142	Scleropages_formosus
ENSHGLG00100015169	TARBP1	94	46.543	ENSSMAG00000007081	si:dkey-85a20.4	83	46.614	Scophthalmus_maximus
ENSHGLG00100015169	TARBP1	95	44.057	ENSSDUG00000023566	si:dkey-85a20.4	85	44.239	Seriola_dumerili
ENSHGLG00100015169	TARBP1	94	46.431	ENSSLDG00000020200	si:dkey-85a20.4	84	46.614	Seriola_lalandi_dorsalis
ENSHGLG00100015169	TARBP1	92	76.905	ENSSARG00000012207	TARBP1	84	76.905	Sorex_araneus
ENSHGLG00100015169	TARBP1	99	61.704	ENSSPUG00000015364	TARBP1	94	61.704	Sphenodon_punctatus
ENSHGLG00100015169	TARBP1	94	45.651	ENSSPAG00000007213	si:dkey-85a20.4	84	45.651	Stegastes_partitus
ENSHGLG00100015169	TARBP1	95	82.949	ENSSSCG00000010160	TARBP1	94	81.900	Sus_scrofa
ENSHGLG00100015169	TARBP1	90	65.367	ENSTGUG00000010214	TARBP1	100	65.367	Taeniopygia_guttata
ENSHGLG00100015169	TARBP1	94	44.461	ENSTNIG00000016586	si:dkey-85a20.4	99	44.758	Tetraodon_nigroviridis
ENSHGLG00100015169	TARBP1	94	75.535	ENSTTRG00000008707	TARBP1	93	75.535	Tursiops_truncatus
ENSHGLG00100015169	TARBP1	91	78.959	ENSUMAG00000006730	TARBP1	99	78.959	Ursus_maritimus
ENSHGLG00100015169	TARBP1	78	84.000	ENSVPAG00000007665	TARBP1	79	84.000	Vicugna_pacos
ENSHGLG00100015169	TARBP1	95	79.290	ENSVVUG00000007460	TARBP1	99	78.799	Vulpes_vulpes
ENSHGLG00100015169	TARBP1	94	53.488	ENSXETG00000016224	tarbp1	99	53.488	Xenopus_tropicalis
ENSHGLG00100015169	TARBP1	85	47.885	ENSXCOG00000011779	si:dkey-85a20.4	91	47.885	Xiphophorus_couchianus
ENSHGLG00100015169	TARBP1	72	42.154	ENSXMAG00000009600	si:dkey-85a20.4	100	42.247	Xiphophorus_maculatus