EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100015565 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 1102 bases
Position: chrJH171309.1:240301-241402
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100021133	RRM_1	PF00076.22	2.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100021358	-	792	-	ENSHGLP00100021133	263 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100015565's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100015565's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100015565	-	60	52.121	ENSHGLG00100005230	PABPN1L	71	48.352
ENSHGLG00100015565	-	56	73.494	ENSHGLG00100018935	-	93	76.506
ENSHGLG00100015565	-	55	91.724	ENSHGLG00100006673	-	91	91.724

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100015565	-	72	81.429	ENSG00000100836	PABPN1	93	80.120	Homo_sapiens
ENSHGLG00100015565	-	64	81.915	ENSG00000258643	BCL2L2-PABPN1	56	81.915	Homo_sapiens
ENSHGLG00100015565	-	87	65.502	ENSAPOG00000016425	pabpn1	87	70.048	Acanthochromis_polyacanthus
ENSHGLG00100015565	-	64	81.915	ENSAMEG00000007048	BCL2L2-PABPN1	99	81.915	Ailuropoda_melanoleuca
ENSHGLG00100015565	-	87	64.502	ENSACIG00000021744	pabpn1	93	68.675	Amphilophus_citrinellus
ENSHGLG00100015565	-	87	65.502	ENSAOCG00000015805	pabpn1	87	70.048	Amphiprion_ocellaris
ENSHGLG00100015565	-	87	65.502	ENSAPEG00000009623	pabpn1	87	70.048	Amphiprion_percula
ENSHGLG00100015565	-	87	65.502	ENSATEG00000020531	pabpn1	87	70.048	Anabas_testudineus
ENSHGLG00100015565	-	64	77.778	ENSACAG00000006185	-	74	74.163	Anolis_carolinensis
ENSHGLG00100015565	-	68	81.313	ENSANAG00000024513	-	91	70.037	Aotus_nancymaae
ENSHGLG00100015565	-	87	64.224	ENSACLG00000016374	pabpn1	64	72.775	Astatotilapia_calliptera
ENSHGLG00100015565	-	87	66.087	ENSAMXG00000000452	pabpn1	93	70.060	Astyanax_mexicanus
ENSHGLG00100015565	-	65	80.526	ENSBTAG00000053753	-	75	76.961	Bos_taurus
ENSHGLG00100015565	-	67	82.286	ENSBTAG00000050594	-	89	69.636	Bos_taurus
ENSHGLG00100015565	-	73	80.569	ENSBTAG00000006884	PABPN1	92	68.929	Bos_taurus
ENSHGLG00100015565	-	57	53.333	WBGene00003904	pabp-2	73	54.000	Caenorhabditis_elegans
ENSHGLG00100015565	-	72	81.429	ENSCJAG00000007960	-	92	69.643	Callithrix_jacchus
ENSHGLG00100015565	-	56	78.313	ENSCJAG00000004407	-	83	78.313	Callithrix_jacchus
ENSHGLG00100015565	-	80	79.565	ENSCAFG00000011482	PABPN1	92	70.714	Canis_familiaris
ENSHGLG00100015565	-	72	81.429	ENSCAFG00020007298	-	92	69.643	Canis_lupus_dingo
ENSHGLG00100015565	-	72	81.429	ENSCAFG00020006651	-	92	69.643	Canis_lupus_dingo
ENSHGLG00100015565	-	73	81.043	ENSCHIG00000012184	PABPN1	92	69.286	Capra_hircus
ENSHGLG00100015565	-	64	81.915	ENSTSYG00000033996	BCL2L2-PABPN1	93	80.120	Carlito_syrichta
ENSHGLG00100015565	-	73	82.464	ENSCPOG00000025574	PABPN1	92	70.000	Cavia_porcellus
ENSHGLG00100015565	-	72	81.429	ENSCCAG00000033954	BCL2L2-PABPN1	92	69.643	Cebus_capucinus
ENSHGLG00100015565	-	72	81.429	ENSCATG00000038536	BCL2L2-PABPN1	92	69.643	Cercocebus_atys
ENSHGLG00100015565	-	70	64.706	ENSCLAG00000012423	PABPN1	90	59.786	Chinchilla_lanigera
ENSHGLG00100015565	-	70	79.902	ENSCSAG00000016036	PABPN1	92	68.571	Chlorocebus_sabaeus
ENSHGLG00100015565	-	70	73.529	ENSCHOG00000004798	BCL2L2-PABPN1	88	73.529	Choloepus_hoffmanni
ENSHGLG00100015565	-	56	77.108	ENSCPBG00000026060	-	93	77.108	Chrysemys_picta_bellii
ENSHGLG00100015565	-	71	52.941	ENSCING00000012468	-	87	55.838	Ciona_intestinalis
ENSHGLG00100015565	-	60	52.571	ENSCSAVG00000002001	-	93	54.140	Ciona_savignyi
ENSHGLG00100015565	-	95	60.339	ENSCANG00000030980	-	94	62.319	Colobus_angolensis_palliatus
ENSHGLG00100015565	-	64	81.915	ENSCANG00000009750	BCL2L2-PABPN1	93	80.120	Colobus_angolensis_palliatus
ENSHGLG00100015565	-	72	80.952	ENSCGRG00001019696	Pabpn1	93	79.518	Cricetulus_griseus_chok1gshd
ENSHGLG00100015565	-	55	90.345	ENSCGRG00000011102	Pabpn1	90	90.345	Cricetulus_griseus_crigri
ENSHGLG00100015565	-	87	64.629	ENSCSEG00000008774	pabpn1	91	68.396	Cynoglossus_semilaevis
ENSHGLG00100015565	-	87	61.446	ENSCVAG00000003152	pabpn1	87	69.231	Cyprinodon_variegatus
ENSHGLG00100015565	-	87	65.939	ENSDARG00000045373	pabpn1	83	75.532	Danio_rerio
ENSHGLG00100015565	-	54	57.447	ENSDARG00000087996	pabpn1l	72	61.345	Danio_rerio
ENSHGLG00100015565	-	72	81.429	ENSDNOG00000023682	PABPN1	92	69.643	Dasypus_novemcinctus
ENSHGLG00100015565	-	60	75.796	ENSDORG00000023928	-	92	74.658	Dipodomys_ordii
ENSHGLG00100015565	-	72	81.905	ENSDORG00000028966	-	92	69.643	Dipodomys_ordii
ENSHGLG00100015565	-	71	54.950	FBgn0005648	Pabp2	76	58.511	Drosophila_melanogaster
ENSHGLG00100015565	-	66	67.692	ENSEBUG00000002322	pabpn1	86	66.832	Eptatretus_burgeri
ENSHGLG00100015565	-	72	81.429	ENSEASG00005011716	PABPN1	92	69.643	Equus_asinus_asinus
ENSHGLG00100015565	-	72	80.861	ENSECAG00000011652	PABPN1	91	68.148	Equus_caballus
ENSHGLG00100015565	-	73	77.725	ENSEEUG00000012973	-	95	65.233	Erinaceus_europaeus
ENSHGLG00100015565	-	71	76.190	ENSELUG00000022654	pabpn1	86	71.635	Esox_lucius
ENSHGLG00100015565	-	72	81.429	ENSFCAG00000031922	PABPN1	92	69.643	Felis_catus
ENSHGLG00100015565	-	56	80.120	ENSFDAG00000018381	BCL2L2-PABPN1	93	80.120	Fukomys_damarensis
ENSHGLG00100015565	-	87	64.035	ENSFHEG00000007215	pabpn1	87	67.961	Fundulus_heteroclitus
ENSHGLG00100015565	-	86	64.435	ENSGMOG00000003922	pabpn1	64	76.190	Gadus_morhua
ENSHGLG00100015565	-	66	76.923	ENSGALG00000052930	-	62	75.117	Gallus_gallus
ENSHGLG00100015565	-	87	62.000	ENSGAFG00000017099	pabpn1	87	69.378	Gambusia_affinis
ENSHGLG00100015565	-	86	63.559	ENSGACG00000002167	pabpn1	88	66.364	Gasterosteus_aculeatus
ENSHGLG00100015565	-	91	61.871	ENSGGOG00000025919	-	97	67.347	Gorilla_gorilla
ENSHGLG00100015565	-	72	81.429	ENSGGOG00000022683	-	92	69.643	Gorilla_gorilla
ENSHGLG00100015565	-	78	64.286	ENSGGOG00000039675	-	99	58.608	Gorilla_gorilla
ENSHGLG00100015565	-	87	65.502	ENSHBUG00000019523	pabpn1	87	69.565	Haplochromis_burtoni
ENSHGLG00100015565	-	56	68.987	ENSHGLG00000009842	-	92	68.987	Heterocephalus_glaber_female
ENSHGLG00100015565	-	99	97.388	ENSHGLG00000018588	-	100	97.388	Heterocephalus_glaber_female
ENSHGLG00100015565	-	73	82.464	ENSHGLG00000002927	-	91	91.724	Heterocephalus_glaber_female
ENSHGLG00100015565	-	87	65.066	ENSHCOG00000004655	pabpn1	87	68.599	Hippocampus_comes
ENSHGLG00100015565	-	71	73.016	ENSIPUG00000000180	-	90	68.269	Ictalurus_punctatus
ENSHGLG00100015565	-	87	66.376	ENSIPUG00000008085	PABPN1	87	71.014	Ictalurus_punctatus
ENSHGLG00100015565	-	56	80.120	ENSSTOG00000029847	BCL2L2-PABPN1	93	80.120	Ictidomys_tridecemlineatus
ENSHGLG00100015565	-	56	80.120	ENSJJAG00000023507	Gm20521	93	80.120	Jaculus_jaculus
ENSHGLG00100015565	-	87	61.847	ENSKMAG00000018748	pabpn1	87	69.712	Kryptolebias_marmoratus
ENSHGLG00100015565	-	87	65.502	ENSLBEG00000027266	pabpn1	87	70.048	Labrus_bergylta
ENSHGLG00100015565	-	61	81.366	ENSLACG00000000646	pabpn1	86	70.732	Latimeria_chalumnae
ENSHGLG00100015565	-	86	63.445	ENSLOCG00000000796	pabpn1	70	72.589	Lepisosteus_oculatus
ENSHGLG00100015565	-	71	56.585	ENSLOCG00000004694	pabpn1l	96	57.561	Lepisosteus_oculatus
ENSHGLG00100015565	-	64	81.915	ENSMFAG00000032183	BCL2L2-PABPN1	93	80.120	Macaca_fascicularis
ENSHGLG00100015565	-	75	72.851	ENSMMUG00000014747	BCL2L2-PABPN1	99	79.310	Macaca_mulatta
ENSHGLG00100015565	-	96	56.040	ENSMMUG00000048382	-	94	57.951	Macaca_mulatta
ENSHGLG00100015565	-	96	56.618	ENSMNEG00000035750	-	98	73.571	Macaca_nemestrina
ENSHGLG00100015565	-	72	81.429	ENSMNEG00000045065	BCL2L2-PABPN1	92	69.643	Macaca_nemestrina
ENSHGLG00100015565	-	56	68.098	ENSMLEG00000034623	-	98	75.000	Mandrillus_leucophaeus
ENSHGLG00100015565	-	64	81.915	ENSMLEG00000043862	BCL2L2-PABPN1	93	80.120	Mandrillus_leucophaeus
ENSHGLG00100015565	-	87	65.939	ENSMAMG00000007979	pabpn1	65	74.468	Mastacembelus_armatus
ENSHGLG00100015565	-	87	65.502	ENSMZEG00005011904	pabpn1	64	74.468	Maylandia_zebra
ENSHGLG00100015565	-	72	80.952	ENSMAUG00000007383	Gm20521	93	69.928	Mesocricetus_auratus
ENSHGLG00100015565	-	73	81.132	ENSMICG00000010002	BCL2L2-PABPN1	92	69.286	Microcebus_murinus
ENSHGLG00100015565	-	72	80.952	ENSMOCG00000018557	Gm20521	96	85.350	Microtus_ochrogaster
ENSHGLG00100015565	-	87	65.502	ENSMMOG00000005405	pabpn1	87	70.048	Mola_mola
ENSHGLG00100015565	-	71	76.555	ENSMODG00000004535	-	91	68.345	Monodelphis_domestica
ENSHGLG00100015565	-	87	65.502	ENSMALG00000019612	pabpn1	64	74.468	Monopterus_albus
ENSHGLG00100015565	-	72	80.476	MGP_CAROLIEiJ_G0019277	Pabpn1	96	84.713	Mus_caroli
ENSHGLG00100015565	-	64	80.851	MGP_CAROLIEiJ_G0019276	Gm20521	56	80.851	Mus_caroli
ENSHGLG00100015565	-	64	80.851	ENSMUSG00000092232	Gm20521	56	80.851	Mus_musculus
ENSHGLG00100015565	-	72	80.476	ENSMUSG00000022194	Pabpn1	96	84.713	Mus_musculus
ENSHGLG00100015565	-	72	80.476	MGP_PahariEiJ_G0030295	Pabpn1	100	88.095	Mus_pahari
ENSHGLG00100015565	-	64	80.851	MGP_PahariEiJ_G0030294	Gm20521	56	80.851	Mus_pahari
ENSHGLG00100015565	-	72	80.476	MGP_SPRETEiJ_G0020166	Pabpn1	96	84.713	Mus_spretus
ENSHGLG00100015565	-	64	80.851	MGP_SPRETEiJ_G0020165	Gm20521	56	80.851	Mus_spretus
ENSHGLG00100015565	-	53	79.739	ENSMPUG00000006775	-	91	79.739	Mustela_putorius_furo
ENSHGLG00100015565	-	94	66.304	ENSMLUG00000028677	-	79	76.636	Myotis_lucifugus
ENSHGLG00100015565	-	64	80.319	ENSMLUG00000003800	-	99	80.319	Myotis_lucifugus
ENSHGLG00100015565	-	80	73.276	ENSMLUG00000012452	-	73	73.799	Myotis_lucifugus
ENSHGLG00100015565	-	64	81.915	ENSNGAG00000019529	Gm20521	56	81.915	Nannospalax_galili
ENSHGLG00100015565	-	87	65.502	ENSNBRG00000023955	pabpn1	93	68.675	Neolamprologus_brichardi
ENSHGLG00100015565	-	72	81.429	ENSNLEG00000015007	-	80	79.111	Nomascus_leucogenys
ENSHGLG00100015565	-	96	67.568	ENSNLEG00000030598	-	80	75.248	Nomascus_leucogenys
ENSHGLG00100015565	-	67	67.188	ENSOPRG00000016461	PABPN1	64	73.077	Ochotona_princeps
ENSHGLG00100015565	-	60	71.186	ENSODEG00000011555	-	89	69.880	Octodon_degus
ENSHGLG00100015565	-	72	78.000	ENSODEG00000003739	-	94	67.939	Octodon_degus
ENSHGLG00100015565	-	73	82.464	ENSODEG00000002083	BCL2L2-PABPN1	92	70.000	Octodon_degus
ENSHGLG00100015565	-	87	65.502	ENSONIG00000008112	pabpn1	64	74.468	Oreochromis_niloticus
ENSHGLG00100015565	-	73	81.517	ENSOCUG00000016174	PABPN1	95	72.481	Oryctolagus_cuniculus
ENSHGLG00100015565	-	87	65.066	ENSORLG00000027900	pabpn1	77	74.468	Oryzias_latipes
ENSHGLG00100015565	-	71	74.468	ENSORLG00020004681	pabpn1	68	69.268	Oryzias_latipes_hni
ENSHGLG00100015565	-	87	65.066	ENSORLG00015000018	pabpn1	87	70.048	Oryzias_latipes_hsok
ENSHGLG00100015565	-	87	62.397	ENSOMEG00000016618	pabpn1	73	70.647	Oryzias_melastigma
ENSHGLG00100015565	-	72	81.429	ENSOGAG00000008710	PABPN1	92	69.643	Otolemur_garnettii
ENSHGLG00100015565	-	64	81.915	ENSOARG00000019336	BCL2L2-PABPN1	52	81.915	Ovis_aries
ENSHGLG00100015565	-	56	66.265	ENSPPAG00000039421	-	93	66.265	Pan_paniscus
ENSHGLG00100015565	-	64	81.915	ENSPPAG00000028984	BCL2L2-PABPN1	91	79.739	Pan_paniscus
ENSHGLG00100015565	-	72	81.429	ENSPPRG00000010567	PABPN1	92	69.643	Panthera_pardus
ENSHGLG00100015565	-	56	80.120	ENSPTIG00000001063	BCL2L2-PABPN1	93	80.120	Panthera_tigris_altaica
ENSHGLG00100015565	-	72	81.429	ENSPTRG00000006167	BCL2L2	92	69.643	Pan_troglodytes
ENSHGLG00100015565	-	87	60.400	ENSPTRG00000047273	-	99	57.857	Pan_troglodytes
ENSHGLG00100015565	-	72	81.429	ENSPANG00000021100	BCL2L2-PABPN1	92	69.643	Papio_anubis
ENSHGLG00100015565	-	96	58.763	ENSPANG00000023326	-	98	74.286	Papio_anubis
ENSHGLG00100015565	-	57	66.887	ENSPKIG00000008340	pabpn1l	91	59.358	Paramormyrops_kingsleyae
ENSHGLG00100015565	-	78	67.317	ENSPKIG00000018052	pabpn1	91	68.075	Paramormyrops_kingsleyae
ENSHGLG00100015565	-	87	65.502	ENSPKIG00000008144	-	64	75.000	Paramormyrops_kingsleyae
ENSHGLG00100015565	-	87	65.502	ENSPMGG00000022027	pabpn1	67	74.468	Periophthalmus_magnuspinnatus
ENSHGLG00100015565	-	72	80.952	ENSPEMG00000008332	Gm20521	98	85.093	Peromyscus_maniculatus_bairdii
ENSHGLG00100015565	-	63	71.930	ENSPMAG00000006212	pabpn1	93	61.778	Petromyzon_marinus
ENSHGLG00100015565	-	71	82.258	ENSPCIG00000027751	-	92	68.571	Phascolarctos_cinereus
ENSHGLG00100015565	-	87	61.200	ENSPFOG00000010351	pabpn1	86	68.421	Poecilia_formosa
ENSHGLG00100015565	-	86	62.083	ENSPLAG00000022696	pabpn1	64	73.158	Poecilia_latipinna
ENSHGLG00100015565	-	87	61.200	ENSPMEG00000020856	pabpn1	87	68.421	Poecilia_mexicana
ENSHGLG00100015565	-	87	61.600	ENSPREG00000011278	pabpn1	87	68.900	Poecilia_reticulata
ENSHGLG00100015565	-	70	81.218	ENSPPYG00000005663	PABPN1	89	71.486	Pongo_abelii
ENSHGLG00100015565	-	70	66.834	ENSPCAG00000005902	PABPN1	91	58.582	Procavia_capensis
ENSHGLG00100015565	-	73	81.132	ENSPCOG00000028047	BCL2L2-PABPN1	92	69.286	Propithecus_coquereli
ENSHGLG00100015565	-	72	80.000	ENSPVAG00000005270	PABPN1	91	68.214	Pteropus_vampyrus
ENSHGLG00100015565	-	87	65.502	ENSPNYG00000013182	pabpn1	87	69.565	Pundamilia_nyererei
ENSHGLG00100015565	-	68	56.701	ENSPNAG00000021666	pabpn1l	94	58.031	Pygocentrus_nattereri
ENSHGLG00100015565	-	87	66.376	ENSPNAG00000023526	pabpn1	87	71.014	Pygocentrus_nattereri
ENSHGLG00100015565	-	72	80.476	ENSRNOG00000042195	Pabpn1	91	69.565	Rattus_norvegicus
ENSHGLG00100015565	-	97	60.650	ENSRBIG00000039547	-	91	60.311	Rhinopithecus_bieti
ENSHGLG00100015565	-	62	81.714	ENSRBIG00000040762	BCL2L2-PABPN1	54	82.184	Rhinopithecus_bieti
ENSHGLG00100015565	-	72	71.845	ENSRBIG00000042811	-	92	69.955	Rhinopithecus_bieti
ENSHGLG00100015565	-	72	66.667	ENSRROG00000036409	-	68	65.198	Rhinopithecus_roxellana
ENSHGLG00100015565	-	99	60.498	ENSRROG00000040409	-	91	60.700	Rhinopithecus_roxellana
ENSHGLG00100015565	-	62	81.714	ENSRROG00000045535	BCL2L2-PABPN1	93	80.120	Rhinopithecus_roxellana
ENSHGLG00100015565	-	64	76.617	ENSSBOG00000026930	BCL2L2-PABPN1	91	79.739	Saimiri_boliviensis_boliviensis
ENSHGLG00100015565	-	87	57.600	ENSSHAG00000007707	-	94	61.086	Sarcophilus_harrisii
ENSHGLG00100015565	-	74	69.444	ENSSHAG00000014841	-	99	72.093	Sarcophilus_harrisii
ENSHGLG00100015565	-	71	56.853	ENSSFOG00015015833	pabpn1l	91	57.071	Scleropages_formosus
ENSHGLG00100015565	-	87	65.066	ENSSFOG00015014718	pabpn1	91	68.396	Scleropages_formosus
ENSHGLG00100015565	-	75	70.936	ENSSFOG00015012565	pabpn1	99	66.816	Scleropages_formosus
ENSHGLG00100015565	-	87	65.502	ENSSMAG00000020157	pabpn1	87	70.048	Scophthalmus_maximus
ENSHGLG00100015565	-	87	65.502	ENSSDUG00000020582	pabpn1	64	74.468	Seriola_dumerili
ENSHGLG00100015565	-	87	65.502	ENSSLDG00000007118	pabpn1	87	70.048	Seriola_lalandi_dorsalis
ENSHGLG00100015565	-	56	75.301	ENSSPUG00000018308	-	93	75.904	Sphenodon_punctatus
ENSHGLG00100015565	-	87	65.652	ENSSPAG00000021658	pabpn1	87	69.712	Stegastes_partitus
ENSHGLG00100015565	-	59	52.903	ENSSSCG00000038472	-	90	52.055	Sus_scrofa
ENSHGLG00100015565	-	72	81.429	ENSSSCG00000002023	PABPN1	92	69.643	Sus_scrofa
ENSHGLG00100015565	-	75	65.854	ENSSSCG00000034805	-	81	62.439	Sus_scrofa
ENSHGLG00100015565	-	87	65.939	ENSTRUG00000023664	pabpn1	87	70.531	Takifugu_rubripes
ENSHGLG00100015565	-	71	75.532	ENSTNIG00000005369	pabpn1	85	75.532	Tetraodon_nigroviridis
ENSHGLG00100015565	-	72	81.429	ENSUAMG00000024460	PABPN1	92	69.751	Ursus_americanus
ENSHGLG00100015565	-	64	81.915	ENSUMAG00000014288	BCL2L2-PABPN1	56	81.915	Ursus_maritimus
ENSHGLG00100015565	-	74	72.727	ENSVVUG00000019912	BCL2L2-PABPN1	74	81.915	Vulpes_vulpes
ENSHGLG00100015565	-	67	75.258	ENSXETG00000014597	pabpn1	69	76.812	Xenopus_tropicalis
ENSHGLG00100015565	-	50	68.627	ENSXCOG00000005158	pabpn1	89	69.536	Xiphophorus_couchianus
ENSHGLG00100015565	-	87	62.000	ENSXMAG00000006196	pabpn1	87	69.378	Xiphophorus_maculatus