EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100016220 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 67664 bases
Position: chrJH171972.1:395649-463312
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100022036	La	PF05383.17	2.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100022264	-	4355	-	ENSHGLP00100022036	738 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100016220's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100016220's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100016220	-	50	43.767	ENSHGLG00100002832	-	76	43.767
ENSHGLG00100016220	-	88	81.327	ENSHGLG00100017261	-	100	81.327
ENSHGLG00100016220	-	86	38.473	ENSHGLG00100011678	-	92	38.405
ENSHGLG00100016220	-	94	39.205	ENSHGLG00100016984	-	99	40.374

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100016220	-	100	89.310	ENSG00000107929	LARP4B	100	89.474	Homo_sapiens
ENSHGLG00100016220	-	100	55.921	ENSAPOG00000020531	LARP4B	100	56.316	Acanthochromis_polyacanthus
ENSHGLG00100016220	-	100	86.622	ENSAMEG00000001810	LARP4B	100	86.622	Ailuropoda_melanoleuca
ENSHGLG00100016220	-	86	57.822	ENSAOCG00000007887	-	79	84.768	Amphiprion_ocellaris
ENSHGLG00100016220	-	96	57.958	ENSAPEG00000002512	LARP4B	98	57.545	Amphiprion_percula
ENSHGLG00100016220	-	100	55.500	ENSATEG00000012614	LARP4B	100	55.750	Anabas_testudineus
ENSHGLG00100016220	-	100	76.831	ENSAPLG00000003813	LARP4B	98	76.831	Anas_platyrhynchos
ENSHGLG00100016220	-	100	74.533	ENSACAG00000002858	LARP4B	100	74.533	Anolis_carolinensis
ENSHGLG00100016220	-	100	88.498	ENSANAG00000007531	-	100	88.498	Aotus_nancymaae
ENSHGLG00100016220	-	100	56.929	ENSACLG00000026356	LARP4B	100	57.303	Astatotilapia_calliptera
ENSHGLG00100016220	-	92	52.891	ENSAMXG00000003335	larp4b	93	52.750	Astyanax_mexicanus
ENSHGLG00100016220	-	100	83.019	ENSBTAG00000013899	LARP4B	100	83.019	Bos_taurus
ENSHGLG00100016220	-	100	88.363	ENSCJAG00000018434	LARP4B	100	88.363	Callithrix_jacchus
ENSHGLG00100016220	-	100	86.892	ENSCAFG00020004209	LARP4B	100	86.892	Canis_lupus_dingo
ENSHGLG00100016220	-	100	82.615	ENSCHIG00000013543	LARP4B	100	82.615	Capra_hircus
ENSHGLG00100016220	-	80	92.101	ENSTSYG00000002568	LARP4B	100	92.101	Carlito_syrichta
ENSHGLG00100016220	-	96	83.333	ENSCAPG00000009725	LARP4B	97	83.053	Cavia_aperea
ENSHGLG00100016220	-	100	95.535	ENSCPOG00000009375	LARP4B	100	95.535	Cavia_porcellus
ENSHGLG00100016220	-	100	88.769	ENSCCAG00000024869	LARP4B	100	88.769	Cebus_capucinus
ENSHGLG00100016220	-	100	89.851	ENSCATG00000019750	LARP4B	100	89.851	Cercocebus_atys
ENSHGLG00100016220	-	100	95.541	ENSCLAG00000011570	LARP4B	100	95.541	Chinchilla_lanigera
ENSHGLG00100016220	-	66	90.323	ENSCHOG00000007831	-	66	90.323	Choloepus_hoffmanni
ENSHGLG00100016220	-	100	76.667	ENSCPBG00000017063	LARP4B	100	76.667	Chrysemys_picta_bellii
ENSHGLG00100016220	-	100	87.821	ENSCANG00000038021	LARP4B	100	87.821	Colobus_angolensis_palliatus
ENSHGLG00100016220	-	100	90.283	ENSCGRG00001022930	Larp4b	100	91.916	Cricetulus_griseus_chok1gshd
ENSHGLG00100016220	-	100	90.283	ENSCGRG00000006022	Larp4b	100	91.916	Cricetulus_griseus_crigri
ENSHGLG00100016220	-	100	53.633	ENSCSEG00000007342	LARP4B	100	53.765	Cynoglossus_semilaevis
ENSHGLG00100016220	-	100	55.569	ENSCVAG00000008910	LARP4B	100	55.834	Cyprinodon_variegatus
ENSHGLG00100016220	-	90	52.838	ENSDARG00000062146	larp4b	91	53.779	Danio_rerio
ENSHGLG00100016220	-	93	88.728	ENSDNOG00000045543	-	100	91.129	Dasypus_novemcinctus
ENSHGLG00100016220	-	100	90.405	ENSDORG00000009328	Larp4b	100	91.725	Dipodomys_ordii
ENSHGLG00100016220	-	85	84.192	ENSETEG00000011249	LARP4B	91	84.192	Echinops_telfairi
ENSHGLG00100016220	-	100	87.027	ENSEASG00005019068	-	100	87.027	Equus_asinus_asinus
ENSHGLG00100016220	-	100	87.162	ENSECAG00000024040	LARP4B	100	87.162	Equus_caballus
ENSHGLG00100016220	-	100	82.773	ENSEEUG00000008391	LARP4B	98	82.907	Erinaceus_europaeus
ENSHGLG00100016220	-	89	40.059	ENSELUG00000001417	-	94	39.881	Esox_lucius
ENSHGLG00100016220	-	100	55.390	ENSELUG00000008626	LARP4B	100	55.638	Esox_lucius
ENSHGLG00100016220	-	100	85.445	ENSFCAG00000000721	-	100	85.445	Felis_catus
ENSHGLG00100016220	-	100	75.600	ENSFALG00000006961	LARP4B	100	75.600	Ficedula_albicollis
ENSHGLG00100016220	-	100	97.564	ENSFDAG00000006158	LARP4B	97	97.564	Fukomys_damarensis
ENSHGLG00100016220	-	100	50.845	ENSFHEG00000013037	LARP4B	65	89.916	Fundulus_heteroclitus
ENSHGLG00100016220	-	75	64.109	ENSGMOG00000010818	-	89	64.677	Gadus_morhua
ENSHGLG00100016220	-	100	75.963	ENSGALG00000006672	LARP4B	100	75.963	Gallus_gallus
ENSHGLG00100016220	-	100	57.935	ENSGACG00000017535	LARP4B	98	58.710	Gasterosteus_aculeatus
ENSHGLG00100016220	-	91	78.216	ENSGAGG00000008598	LARP4B	100	78.216	Gopherus_agassizii
ENSHGLG00100016220	-	100	89.175	ENSGGOG00000003572	LARP4B	100	89.175	Gorilla_gorilla
ENSHGLG00100016220	-	100	56.429	ENSHBUG00000007535	LARP4B	100	56.804	Haplochromis_burtoni
ENSHGLG00100016220	-	100	99.595	ENSHGLG00000012936	LARP4B	100	100.000	Heterocephalus_glaber_female
ENSHGLG00100016220	-	99	53.796	ENSHCOG00000011581	LARP4B	89	53.665	Hippocampus_comes
ENSHGLG00100016220	-	92	51.650	ENSIPUG00000009705	larp4b	93	51.506	Ictalurus_punctatus
ENSHGLG00100016220	-	100	89.595	ENSSTOG00000000587	LARP4B	100	96.350	Ictidomys_tridecemlineatus
ENSHGLG00100016220	-	100	90.392	ENSJJAG00000020847	Larp4b	100	90.392	Jaculus_jaculus
ENSHGLG00100016220	-	100	56.391	ENSKMAG00000021674	LARP4B	100	56.892	Kryptolebias_marmoratus
ENSHGLG00100016220	-	78	62.207	ENSLBEG00000025293	-	79	62.437	Labrus_bergylta
ENSHGLG00100016220	-	91	66.667	ENSLACG00000009492	LARP4B	100	66.667	Latimeria_chalumnae
ENSHGLG00100016220	-	100	64.482	ENSLOCG00000012290	larp4b	100	65.994	Lepisosteus_oculatus
ENSHGLG00100016220	-	100	87.903	ENSLAFG00000015334	LARP4B	100	88.201	Loxodonta_africana
ENSHGLG00100016220	-	100	89.851	ENSMFAG00000001766	LARP4B	100	87.686	Macaca_fascicularis
ENSHGLG00100016220	-	100	89.851	ENSMMUG00000005279	LARP4B	100	89.851	Macaca_mulatta
ENSHGLG00100016220	-	100	89.716	ENSMNEG00000014019	LARP4B	100	87.551	Macaca_nemestrina
ENSHGLG00100016220	-	100	89.459	ENSMLEG00000035198	LARP4B	100	89.459	Mandrillus_leucophaeus
ENSHGLG00100016220	-	100	55.293	ENSMAMG00000013742	LARP4B	100	55.542	Mastacembelus_armatus
ENSHGLG00100016220	-	80	63.344	ENSMZEG00005006498	-	96	61.897	Maylandia_zebra
ENSHGLG00100016220	-	91	57.435	ENSMZEG00005014594	-	100	57.687	Maylandia_zebra
ENSHGLG00100016220	-	100	75.100	ENSMGAG00000005472	LARP4B	100	75.100	Meleagris_gallopavo
ENSHGLG00100016220	-	100	90.431	ENSMAUG00000021657	Larp4b	100	92.794	Mesocricetus_auratus
ENSHGLG00100016220	-	100	83.221	ENSMICG00000001301	LARP4B	100	83.221	Microcebus_murinus
ENSHGLG00100016220	-	90	93.750	ENSMOCG00000021452	Larp4b	100	93.750	Microtus_ochrogaster
ENSHGLG00100016220	-	85	72.414	ENSMMOG00000011253	-	89	62.197	Mola_mola
ENSHGLG00100016220	-	100	74.637	ENSMODG00000005957	LARP4B	100	74.637	Monodelphis_domestica
ENSHGLG00100016220	-	100	48.942	ENSMALG00000012432	LARP4B	100	50.331	Monopterus_albus
ENSHGLG00100016220	-	100	89.865	MGP_CAROLIEiJ_G0018216	Larp4b	100	90.000	Mus_caroli
ENSHGLG00100016220	-	100	90.027	ENSMUSG00000033499	Larp4b	100	93.146	Mus_musculus
ENSHGLG00100016220	-	100	90.541	MGP_PahariEiJ_G0019266	Larp4b	100	92.945	Mus_pahari
ENSHGLG00100016220	-	100	89.892	MGP_SPRETEiJ_G0019074	Larp4b	100	92.970	Mus_spretus
ENSHGLG00100016220	-	100	85.676	ENSMPUG00000016220	LARP4B	97	85.676	Mustela_putorius_furo
ENSHGLG00100016220	-	94	83.550	ENSMLUG00000005880	LARP4B	100	83.550	Myotis_lucifugus
ENSHGLG00100016220	-	100	89.986	ENSNGAG00000001750	Larp4b	100	89.986	Nannospalax_galili
ENSHGLG00100016220	-	84	72.414	ENSNBRG00000020018	LARP4B	88	56.270	Neolamprologus_brichardi
ENSHGLG00100016220	-	100	89.310	ENSNLEG00000013442	LARP4B	100	89.310	Nomascus_leucogenys
ENSHGLG00100016220	-	83	71.545	ENSMEUG00000013114	-	83	71.545	Notamacropus_eugenii
ENSHGLG00100016220	-	100	88.606	ENSOPRG00000003300	LARP4B	100	88.606	Ochotona_princeps
ENSHGLG00100016220	-	100	90.392	ENSODEG00000001109	LARP4B	100	94.792	Octodon_degus
ENSHGLG00100016220	-	100	58.981	ENSONIG00000017705	LARP4B	100	59.411	Oreochromis_niloticus
ENSHGLG00100016220	-	100	75.561	ENSOANG00000006100	LARP4B	100	75.694	Ornithorhynchus_anatinus
ENSHGLG00100016220	-	100	90.026	ENSOCUG00000004950	LARP4B	97	90.026	Oryctolagus_cuniculus
ENSHGLG00100016220	-	100	55.151	ENSORLG00000006080	LARP4B	100	55.276	Oryzias_latipes
ENSHGLG00100016220	-	100	54.887	ENSORLG00020020940	LARP4B	100	55.013	Oryzias_latipes_hni
ENSHGLG00100016220	-	100	55.094	ENSORLG00015020608	LARP4B	100	55.220	Oryzias_latipes_hsok
ENSHGLG00100016220	-	100	53.392	ENSOMEG00000019619	LARP4B	100	54.329	Oryzias_melastigma
ENSHGLG00100016220	-	94	85.879	ENSOGAG00000011540	LARP4B	100	85.879	Otolemur_garnettii
ENSHGLG00100016220	-	100	82.550	ENSOARG00000015320	LARP4B	98	82.550	Ovis_aries
ENSHGLG00100016220	-	100	89.310	ENSPPAG00000039232	LARP4B	100	89.310	Pan_paniscus
ENSHGLG00100016220	-	100	85.811	ENSPPRG00000009489	LARP4B	100	85.811	Panthera_pardus
ENSHGLG00100016220	-	100	85.811	ENSPTIG00000008543	LARP4B	100	85.811	Panthera_tigris_altaica
ENSHGLG00100016220	-	100	89.310	ENSPTRG00000002235	LARP4B	100	89.310	Pan_troglodytes
ENSHGLG00100016220	-	100	89.851	ENSPANG00000023546	LARP4B	100	87.686	Papio_anubis
ENSHGLG00100016220	-	99	56.380	ENSPKIG00000012368	LARP4B	99	56.250	Paramormyrops_kingsleyae
ENSHGLG00100016220	-	76	86.032	ENSPSIG00000005600	LARP4B	99	86.032	Pelodiscus_sinensis
ENSHGLG00100016220	-	93	54.077	ENSPMGG00000008261	LARP4B	87	54.077	Periophthalmus_magnuspinnatus
ENSHGLG00100016220	-	100	91.069	ENSPEMG00000014052	Larp4b	100	91.069	Peromyscus_maniculatus_bairdii
ENSHGLG00100016220	-	100	55.915	ENSPFOG00000000029	LARP4B	100	55.791	Poecilia_formosa
ENSHGLG00100016220	-	100	55.628	ENSPLAG00000002871	LARP4B	100	56.732	Poecilia_latipinna
ENSHGLG00100016220	-	100	55.955	ENSPMEG00000016361	LARP4B	100	55.831	Poecilia_mexicana
ENSHGLG00100016220	-	100	89.189	ENSPPYG00000002035	LARP4B	97	89.189	Pongo_abelii
ENSHGLG00100016220	-	100	87.821	ENSPCOG00000014688	LARP4B	100	87.821	Propithecus_coquereli
ENSHGLG00100016220	-	85	97.143	ENSPVAG00000009784	LARP4B	88	97.143	Pteropus_vampyrus
ENSHGLG00100016220	-	100	56.929	ENSPNYG00000024252	LARP4B	100	57.303	Pundamilia_nyererei
ENSHGLG00100016220	-	94	52.587	ENSPNAG00000028956	larp4b	95	52.448	Pygocentrus_nattereri
ENSHGLG00100016220	-	99	90.663	ENSRNOG00000015888	Larp4b	100	90.798	Rattus_norvegicus
ENSHGLG00100016220	-	100	89.716	ENSRBIG00000033294	LARP4B	100	89.716	Rhinopithecus_bieti
ENSHGLG00100016220	-	100	89.581	ENSRROG00000033879	LARP4B	100	89.581	Rhinopithecus_roxellana
ENSHGLG00100016220	-	100	82.950	ENSSBOG00000021109	LARP4B	100	82.950	Saimiri_boliviensis_boliviensis
ENSHGLG00100016220	-	100	77.170	ENSSHAG00000013392	LARP4B	100	77.170	Sarcophilus_harrisii
ENSHGLG00100016220	-	91	60.571	ENSSFOG00015003256	LARP4B	90	58.713	Scleropages_formosus
ENSHGLG00100016220	-	82	75.862	ENSSMAG00000005982	-	99	75.862	Scophthalmus_maximus
ENSHGLG00100016220	-	100	56.965	ENSSDUG00000006704	LARP4B	100	57.463	Seriola_dumerili
ENSHGLG00100016220	-	84	62.117	ENSSLDG00000020660	LARP4B	95	61.963	Seriola_lalandi_dorsalis
ENSHGLG00100016220	-	64	98.113	ENSSARG00000001243	-	79	98.113	Sorex_araneus
ENSHGLG00100016220	-	100	73.450	ENSSPUG00000002102	-	100	73.450	Sphenodon_punctatus
ENSHGLG00100016220	-	89	80.169	ENSSPUG00000013734	-	99	80.169	Sphenodon_punctatus
ENSHGLG00100016220	-	100	55.921	ENSSPAG00000014628	LARP4B	100	55.921	Stegastes_partitus
ENSHGLG00100016220	-	100	82.409	ENSSSCG00000011162	LARP4B	100	85.173	Sus_scrofa
ENSHGLG00100016220	-	100	75.904	ENSTGUG00000000811	-	100	75.904	Taeniopygia_guttata
ENSHGLG00100016220	-	99	56.347	ENSTNIG00000007991	LARP4B	99	55.683	Tetraodon_nigroviridis
ENSHGLG00100016220	-	100	57.328	ENSTNIG00000004571	-	98	57.364	Tetraodon_nigroviridis
ENSHGLG00100016220	-	90	89.157	ENSTTRG00000011151	LARP4B	90	89.157	Tursiops_truncatus
ENSHGLG00100016220	-	88	87.846	ENSUAMG00000016461	LARP4B	95	87.846	Ursus_americanus
ENSHGLG00100016220	-	100	87.027	ENSUMAG00000016127	LARP4B	100	87.027	Ursus_maritimus
ENSHGLG00100016220	-	51	95.506	ENSVPAG00000000128	-	73	95.506	Vicugna_pacos
ENSHGLG00100016220	-	100	86.622	ENSVVUG00000008641	LARP4B	100	86.622	Vulpes_vulpes
ENSHGLG00100016220	-	99	69.709	ENSXETG00000016882	larp4b	100	69.709	Xenopus_tropicalis
ENSHGLG00100016220	-	100	53.238	ENSXCOG00000019952	LARP4B	100	53.230	Xiphophorus_couchianus
ENSHGLG00100016220	-	100	56.140	ENSXMAG00000021533	LARP4B	100	55.820	Xiphophorus_maculatus