EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100016261 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: FSHD region gene 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 24305 bases
Position: chrJH166322.1:40940-65244
Accession: 101724089
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100022087	FRG1	PF06229.12	3.6e-80	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100022315	-	1239	XM_004853066	ENSHGLP00100022087	257 (aa)	XP_004853123	G5AP73

Gene Model

Click here to download ENSHGLG00100016261's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100016261's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100016261	-	100	81.323	ENSHGLG00100010674	-	100	81.323
ENSHGLG00100016261	-	99	93.750	ENSHGLG00100021211	-	99	93.750
ENSHGLG00100016261	-	100	76.265	ENSHGLG00100015285	-	100	76.265

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100016261	-	100	96.512	ENSG00000109536	FRG1	100	98.276	Homo_sapiens
ENSHGLG00100016261	-	100	73.930	ENSAPOG00000001060	frg1	100	74.708	Acanthochromis_polyacanthus
ENSHGLG00100016261	-	100	97.674	ENSAMEG00000013503	FRG1	100	97.674	Ailuropoda_melanoleuca
ENSHGLG00100016261	-	87	75.336	ENSACIG00000022283	frg1	98	75.342	Amphilophus_citrinellus
ENSHGLG00100016261	-	87	75.785	ENSAOCG00000024240	frg1	85	75.799	Amphiprion_ocellaris
ENSHGLG00100016261	-	100	73.152	ENSAPEG00000002486	frg1	100	73.930	Amphiprion_percula
ENSHGLG00100016261	-	100	72.374	ENSATEG00000010414	frg1	100	71.984	Anabas_testudineus
ENSHGLG00100016261	-	100	87.938	ENSAPLG00000007785	-	100	87.938	Anas_platyrhynchos
ENSHGLG00100016261	-	100	82.490	ENSACAG00000006877	-	100	82.490	Anolis_carolinensis
ENSHGLG00100016261	-	100	96.498	ENSANAG00000020876	FRG1	100	96.498	Aotus_nancymaae
ENSHGLG00100016261	-	100	65.769	ENSACLG00000027065	frg1	100	65.769	Astatotilapia_calliptera
ENSHGLG00100016261	-	100	76.265	ENSAMXG00000032700	frg1	100	76.265	Astyanax_mexicanus
ENSHGLG00100016261	-	100	97.674	ENSBTAG00000007089	FRG1	100	97.674	Bos_taurus
ENSHGLG00100016261	-	99	42.857	WBGene00014177	frg-1	82	43.860	Caenorhabditis_elegans
ENSHGLG00100016261	-	100	96.498	ENSCJAG00000011272	FRG1	100	96.498	Callithrix_jacchus
ENSHGLG00100016261	-	100	97.674	ENSCAFG00000007135	FRG1	100	97.674	Canis_familiaris
ENSHGLG00100016261	-	83	97.653	ENSCAFG00020000082	-	85	97.653	Canis_lupus_dingo
ENSHGLG00100016261	-	100	97.674	ENSCHIG00000011585	-	100	97.674	Capra_hircus
ENSHGLG00100016261	-	98	68.775	ENSTSYG00000031599	-	100	67.194	Carlito_syrichta
ENSHGLG00100016261	-	92	97.046	ENSCAPG00000016056	-	97	97.046	Cavia_aperea
ENSHGLG00100016261	-	100	98.444	ENSCPOG00000022277	-	100	98.444	Cavia_porcellus
ENSHGLG00100016261	-	100	96.498	ENSCCAG00000024627	FRG1	100	96.498	Cebus_capucinus
ENSHGLG00100016261	-	100	96.512	ENSCATG00000029230	FRG1	100	96.512	Cercocebus_atys
ENSHGLG00100016261	-	100	66.148	ENSCLAG00000006068	-	100	64.591	Chinchilla_lanigera
ENSHGLG00100016261	-	100	98.444	ENSCLAG00000000370	-	100	98.444	Chinchilla_lanigera
ENSHGLG00100016261	-	100	80.620	ENSCLAG00000004960	-	100	81.008	Chinchilla_lanigera
ENSHGLG00100016261	-	99	66.929	ENSCLAG00000009263	-	100	66.929	Chinchilla_lanigera
ENSHGLG00100016261	-	100	96.512	ENSCSAG00000002899	FRG1	100	96.512	Chlorocebus_sabaeus
ENSHGLG00100016261	-	84	90.741	ENSCSAG00000017729	-	100	90.741	Chlorocebus_sabaeus
ENSHGLG00100016261	-	88	88.000	ENSCPBG00000009211	-	85	89.041	Chrysemys_picta_bellii
ENSHGLG00100016261	-	99	51.866	ENSCING00000005161	-	99	53.358	Ciona_intestinalis
ENSHGLG00100016261	-	51	54.545	ENSCSAVG00000008018	-	100	50.000	Ciona_savignyi
ENSHGLG00100016261	-	100	96.512	ENSCANG00000020991	FRG1	100	96.512	Colobus_angolensis_palliatus
ENSHGLG00100016261	-	100	93.798	ENSCGRG00001014998	Frg1	100	92.636	Cricetulus_griseus_chok1gshd
ENSHGLG00100016261	-	100	93.798	ENSCGRG00000011860	-	100	92.636	Cricetulus_griseus_crigri
ENSHGLG00100016261	-	100	76.654	ENSCGRG00000003902	-	96	76.654	Cricetulus_griseus_crigri
ENSHGLG00100016261	-	96	69.919	ENSCSEG00000015950	frg1	100	69.919	Cynoglossus_semilaevis
ENSHGLG00100016261	-	100	72.374	ENSCVAG00000009985	frg1	100	72.374	Cyprinodon_variegatus
ENSHGLG00100016261	-	100	76.265	ENSDARG00000056504	frg1	100	76.265	Danio_rerio
ENSHGLG00100016261	-	100	96.124	ENSDNOG00000014886	FRG1	100	96.124	Dasypus_novemcinctus
ENSHGLG00100016261	-	100	80.620	ENSDORG00000016190	Frg1	100	83.721	Dipodomys_ordii
ENSHGLG00100016261	-	83	52.093	FBgn0036964	FRG1	100	48.485	Drosophila_melanogaster
ENSHGLG00100016261	-	100	91.860	ENSETEG00000012349	-	100	91.085	Echinops_telfairi
ENSHGLG00100016261	-	58	52.703	ENSEBUG00000012359	FRG1	89	52.703	Eptatretus_burgeri
ENSHGLG00100016261	-	100	96.109	ENSEASG00005017497	FRG1	100	96.109	Equus_asinus_asinus
ENSHGLG00100016261	-	100	96.109	ENSECAG00000003122	FRG1	100	96.109	Equus_caballus
ENSHGLG00100016261	-	61	97.452	ENSEEUG00000000145	-	100	97.452	Erinaceus_europaeus
ENSHGLG00100016261	-	100	73.541	ENSELUG00000021712	frg1	100	73.152	Esox_lucius
ENSHGLG00100016261	-	100	97.674	ENSFCAG00000025737	FRG1	100	97.674	Felis_catus
ENSHGLG00100016261	-	87	85.650	ENSFALG00000011231	-	85	86.758	Ficedula_albicollis
ENSHGLG00100016261	-	100	86.538	ENSFDAG00000012697	-	98	92.056	Fukomys_damarensis
ENSHGLG00100016261	-	100	98.833	ENSFDAG00000000962	-	100	98.833	Fukomys_damarensis
ENSHGLG00100016261	-	100	69.650	ENSFHEG00000010540	frg1	100	70.428	Fundulus_heteroclitus
ENSHGLG00100016261	-	100	70.428	ENSGMOG00000000867	frg1	100	70.428	Gadus_morhua
ENSHGLG00100016261	-	100	85.603	ENSGALG00000013590	-	100	85.603	Gallus_gallus
ENSHGLG00100016261	-	81	70.335	ENSGAFG00000013855	frg1	100	70.335	Gambusia_affinis
ENSHGLG00100016261	-	100	71.984	ENSGACG00000016888	frg1	100	72.374	Gasterosteus_aculeatus
ENSHGLG00100016261	-	100	86.770	ENSGAGG00000025012	-	100	86.770	Gopherus_agassizii
ENSHGLG00100016261	-	69	83.708	ENSGGOG00000012888	-	90	83.708	Gorilla_gorilla
ENSHGLG00100016261	-	100	63.566	ENSGGOG00000040796	-	100	62.121	Gorilla_gorilla
ENSHGLG00100016261	-	100	71.206	ENSHBUG00000010667	frg1	100	71.595	Haplochromis_burtoni
ENSHGLG00100016261	-	99	93.750	ENSHGLG00000020943	-	99	93.750	Heterocephalus_glaber_female
ENSHGLG00100016261	-	100	80.934	ENSHGLG00000001211	-	100	80.934	Heterocephalus_glaber_female
ENSHGLG00100016261	-	100	99.611	ENSHGLG00000005601	FRG1	100	99.611	Heterocephalus_glaber_female
ENSHGLG00100016261	-	99	95.703	ENSHGLG00000020402	-	94	95.703	Heterocephalus_glaber_female
ENSHGLG00100016261	-	87	72.646	ENSHCOG00000000224	frg1	94	73.182	Hippocampus_comes
ENSHGLG00100016261	-	100	74.319	ENSIPUG00000022716	frg1	100	74.319	Ictalurus_punctatus
ENSHGLG00100016261	-	100	96.124	ENSSTOG00000002857	-	100	96.124	Ictidomys_tridecemlineatus
ENSHGLG00100016261	-	100	96.899	ENSJJAG00000020625	Frg1	100	96.899	Jaculus_jaculus
ENSHGLG00100016261	-	100	70.817	ENSKMAG00000005841	frg1	100	70.428	Kryptolebias_marmoratus
ENSHGLG00100016261	-	100	70.817	ENSLBEG00000001466	frg1	100	70.817	Labrus_bergylta
ENSHGLG00100016261	-	100	69.847	ENSLACG00000010243	frg1	100	69.084	Latimeria_chalumnae
ENSHGLG00100016261	-	100	74.708	ENSLOCG00000013868	frg1	100	77.821	Lepisosteus_oculatus
ENSHGLG00100016261	-	100	93.023	ENSLAFG00000011191	FRG1	100	94.961	Loxodonta_africana
ENSHGLG00100016261	-	100	96.512	ENSMFAG00000031178	FRG1	100	96.512	Macaca_fascicularis
ENSHGLG00100016261	-	83	86.047	ENSMFAG00000042873	-	89	86.047	Macaca_fascicularis
ENSHGLG00100016261	-	79	85.784	ENSMMUG00000047496	-	88	85.784	Macaca_mulatta
ENSHGLG00100016261	-	100	96.512	ENSMMUG00000001824	FRG1	100	96.512	Macaca_mulatta
ENSHGLG00100016261	-	96	88.664	ENSMNEG00000018620	FRG1	100	87.449	Macaca_nemestrina
ENSHGLG00100016261	-	100	96.512	ENSMLEG00000028881	FRG1	100	96.512	Mandrillus_leucophaeus
ENSHGLG00100016261	-	100	72.763	ENSMAMG00000012406	frg1	100	73.152	Mastacembelus_armatus
ENSHGLG00100016261	-	100	70.817	ENSMZEG00005007549	frg1	100	71.206	Maylandia_zebra
ENSHGLG00100016261	-	100	86.381	ENSMGAG00000011481	-	100	86.381	Meleagris_gallopavo
ENSHGLG00100016261	-	100	96.124	ENSMAUG00000000847	Frg1	100	96.124	Mesocricetus_auratus
ENSHGLG00100016261	-	100	97.287	ENSMICG00000046816	FRG1	100	97.287	Microcebus_murinus
ENSHGLG00100016261	-	100	86.822	ENSMOCG00000023000	Frg1	100	85.659	Microtus_ochrogaster
ENSHGLG00100016261	-	87	71.749	ENSMMOG00000004008	frg1	93	72.146	Mola_mola
ENSHGLG00100016261	-	100	89.147	ENSMODG00000019031	-	87	89.535	Monodelphis_domestica
ENSHGLG00100016261	-	100	72.763	ENSMALG00000018497	frg1	100	73.541	Monopterus_albus
ENSHGLG00100016261	-	100	94.186	MGP_CAROLIEiJ_G0031006	Frg1	100	93.023	Mus_caroli
ENSHGLG00100016261	-	100	94.186	ENSMUSG00000031590	Frg1	100	93.023	Mus_musculus
ENSHGLG00100016261	-	100	93.798	MGP_PahariEiJ_G0021475	Frg1	100	92.636	Mus_pahari
ENSHGLG00100016261	-	100	93.798	MGP_SPRETEiJ_G0032120	Frg1	100	92.636	Mus_spretus
ENSHGLG00100016261	-	100	97.674	ENSMPUG00000017962	FRG1	100	97.674	Mustela_putorius_furo
ENSHGLG00100016261	-	100	96.109	ENSMLUG00000023179	FRG1	100	96.109	Myotis_lucifugus
ENSHGLG00100016261	-	100	96.512	ENSNGAG00000016411	Frg1	100	96.512	Nannospalax_galili
ENSHGLG00100016261	-	81	67.943	ENSNBRG00000006806	frg1	95	66.981	Neolamprologus_brichardi
ENSHGLG00100016261	-	100	81.226	ENSNLEG00000035849	-	100	81.226	Nomascus_leucogenys
ENSHGLG00100016261	-	79	86.139	ENSNLEG00000036059	-	86	86.139	Nomascus_leucogenys
ENSHGLG00100016261	-	100	95.720	ENSNLEG00000000930	FRG1	100	95.720	Nomascus_leucogenys
ENSHGLG00100016261	-	100	80.695	ENSNLEG00000032333	-	100	80.309	Nomascus_leucogenys
ENSHGLG00100016261	-	100	68.093	ENSNLEG00000032846	-	100	89.286	Nomascus_leucogenys
ENSHGLG00100016261	-	79	84.653	ENSNLEG00000028874	-	91	84.653	Nomascus_leucogenys
ENSHGLG00100016261	-	59	93.421	ENSMEUG00000007509	-	59	93.421	Notamacropus_eugenii
ENSHGLG00100016261	-	100	78.988	ENSOPRG00000004722	-	100	79.845	Ochotona_princeps
ENSHGLG00100016261	-	100	73.930	ENSODEG00000006953	-	100	73.930	Octodon_degus
ENSHGLG00100016261	-	100	98.444	ENSODEG00000006458	-	100	98.444	Octodon_degus
ENSHGLG00100016261	-	100	70.930	ENSONIG00000010162	frg1	100	71.318	Oreochromis_niloticus
ENSHGLG00100016261	-	67	91.228	ENSOANG00000005659	-	76	91.228	Ornithorhynchus_anatinus
ENSHGLG00100016261	-	100	97.674	ENSOCUG00000009038	-	100	97.674	Oryctolagus_cuniculus
ENSHGLG00100016261	-	96	69.919	ENSORLG00000008106	frg1	89	70.325	Oryzias_latipes
ENSHGLG00100016261	-	100	70.428	ENSORLG00020014355	frg1	100	70.817	Oryzias_latipes_hni
ENSHGLG00100016261	-	100	70.428	ENSORLG00015014159	frg1	100	70.817	Oryzias_latipes_hsok
ENSHGLG00100016261	-	84	70.370	ENSOMEG00000002468	frg1	88	71.759	Oryzias_melastigma
ENSHGLG00100016261	-	100	95.349	ENSOGAG00000005749	-	100	93.798	Otolemur_garnettii
ENSHGLG00100016261	-	100	95.019	ENSOARG00000008592	FRG1	100	95.019	Ovis_aries
ENSHGLG00100016261	-	96	69.767	ENSPPAG00000043174	-	100	69.767	Pan_paniscus
ENSHGLG00100016261	-	84	92.130	ENSPPAG00000043170	-	94	99.010	Pan_paniscus
ENSHGLG00100016261	-	100	97.287	ENSPPRG00000025003	-	100	97.287	Panthera_pardus
ENSHGLG00100016261	-	100	94.553	ENSPPRG00000019777	-	100	94.553	Panthera_pardus
ENSHGLG00100016261	-	100	96.899	ENSPTIG00000006588	-	100	96.899	Panthera_tigris_altaica
ENSHGLG00100016261	-	100	94.942	ENSPTIG00000006566	-	100	94.942	Panthera_tigris_altaica
ENSHGLG00100016261	-	89	80.519	ENSPTRG00000043123	-	94	80.687	Pan_troglodytes
ENSHGLG00100016261	-	95	76.230	ENSPTRG00000052363	-	94	94.059	Pan_troglodytes
ENSHGLG00100016261	-	100	96.512	ENSPTRG00000050205	-	100	96.512	Pan_troglodytes
ENSHGLG00100016261	-	96	73.790	ENSPTRG00000050204	-	100	73.790	Pan_troglodytes
ENSHGLG00100016261	-	96	75.806	ENSPTRG00000044710	-	100	75.806	Pan_troglodytes
ENSHGLG00100016261	-	100	96.512	ENSPTRG00000016671	-	100	96.512	Pan_troglodytes
ENSHGLG00100016261	-	70	85.556	ENSPANG00000031530	-	84	83.889	Papio_anubis
ENSHGLG00100016261	-	100	70.817	ENSPKIG00000024189	frg1	100	70.817	Paramormyrops_kingsleyae
ENSHGLG00100016261	-	84	87.963	ENSPSIG00000017971	-	82	87.963	Pelodiscus_sinensis
ENSHGLG00100016261	-	98	66.534	ENSPMGG00000019273	frg1	100	66.135	Periophthalmus_magnuspinnatus
ENSHGLG00100016261	-	100	93.798	ENSPEMG00000000650	Frg1	100	93.023	Peromyscus_maniculatus_bairdii
ENSHGLG00100016261	-	100	89.147	ENSPCIG00000007530	-	69	89.147	Phascolarctos_cinereus
ENSHGLG00100016261	-	100	70.817	ENSPFOG00000006721	frg1	100	70.817	Poecilia_formosa
ENSHGLG00100016261	-	100	71.206	ENSPMEG00000013816	frg1	100	71.206	Poecilia_mexicana
ENSHGLG00100016261	-	100	70.428	ENSPREG00000000097	frg1	100	70.428	Poecilia_reticulata
ENSHGLG00100016261	-	56	96.552	ENSPPYG00000029810	-	100	96.552	Pongo_abelii
ENSHGLG00100016261	-	61	90.506	ENSPPYG00000011275	-	87	90.506	Pongo_abelii
ENSHGLG00100016261	-	95	91.057	ENSPCAG00000014953	-	100	89.431	Procavia_capensis
ENSHGLG00100016261	-	100	67.054	ENSPCOG00000022726	FRG1	100	67.054	Propithecus_coquereli
ENSHGLG00100016261	-	100	82.171	ENSPVAG00000010551	FRG1	100	82.171	Pteropus_vampyrus
ENSHGLG00100016261	-	67	74.269	ENSPNYG00000015209	frg1	74	74.269	Pundamilia_nyererei
ENSHGLG00100016261	-	100	72.763	ENSPNAG00000013259	frg1	100	72.763	Pygocentrus_nattereri
ENSHGLG00100016261	-	100	92.636	ENSRNOG00000009846	Frg1	100	91.473	Rattus_norvegicus
ENSHGLG00100016261	-	87	93.333	ENSRBIG00000042219	-	94	92.000	Rhinopithecus_bieti
ENSHGLG00100016261	-	82	90.047	ENSRROG00000032084	-	94	88.462	Rhinopithecus_roxellana
ENSHGLG00100016261	-	100	93.411	ENSRROG00000015523	FRG1	100	93.411	Rhinopithecus_roxellana
ENSHGLG00100016261	-	100	95.720	ENSSBOG00000034175	FRG1	100	95.720	Saimiri_boliviensis_boliviensis
ENSHGLG00100016261	-	100	88.372	ENSSHAG00000005886	-	100	89.922	Sarcophilus_harrisii
ENSHGLG00100016261	-	97	72.289	ENSSFOG00015021361	frg1	99	72.289	Scleropages_formosus
ENSHGLG00100016261	-	100	71.206	ENSSMAG00000001213	frg1	100	70.428	Scophthalmus_maximus
ENSHGLG00100016261	-	100	71.984	ENSSDUG00000018886	frg1	100	72.374	Seriola_dumerili
ENSHGLG00100016261	-	100	71.206	ENSSLDG00000024191	frg1	100	71.595	Seriola_lalandi_dorsalis
ENSHGLG00100016261	-	67	93.567	ENSSARG00000002471	-	91	93.567	Sorex_araneus
ENSHGLG00100016261	-	100	79.767	ENSSPUG00000017326	-	96	84.689	Sphenodon_punctatus
ENSHGLG00100016261	-	100	69.650	ENSSPAG00000013294	frg1	100	68.482	Stegastes_partitus
ENSHGLG00100016261	-	100	96.899	ENSSSCG00000006996	FRG1	100	96.899	Sus_scrofa
ENSHGLG00100016261	-	100	85.603	ENSTGUG00000007028	-	100	85.603	Taeniopygia_guttata
ENSHGLG00100016261	-	100	70.428	ENSTRUG00000016208	frg1	100	71.984	Takifugu_rubripes
ENSHGLG00100016261	-	100	70.428	ENSTNIG00000007128	frg1	100	70.817	Tetraodon_nigroviridis
ENSHGLG00100016261	-	83	67.136	ENSTBEG00000012789	-	100	67.136	Tupaia_belangeri
ENSHGLG00100016261	-	77	61.307	ENSTBEG00000017605	-	99	61.307	Tupaia_belangeri
ENSHGLG00100016261	-	100	93.798	ENSTBEG00000014491	-	100	92.636	Tupaia_belangeri
ENSHGLG00100016261	-	100	96.899	ENSTTRG00000003429	FRG1	100	96.899	Tursiops_truncatus
ENSHGLG00100016261	-	96	88.618	ENSUAMG00000012123	-	100	88.618	Ursus_americanus
ENSHGLG00100016261	-	100	97.674	ENSUMAG00000021119	FRG1	100	97.674	Ursus_maritimus
ENSHGLG00100016261	-	100	94.574	ENSVPAG00000000616	FRG1	100	94.574	Vicugna_pacos
ENSHGLG00100016261	-	92	96.610	ENSVPAG00000011977	-	99	96.610	Vicugna_pacos
ENSHGLG00100016261	-	83	97.653	ENSVVUG00000007181	-	77	97.653	Vulpes_vulpes
ENSHGLG00100016261	-	100	81.323	ENSXETG00000012470	frg1	100	81.323	Xenopus_tropicalis
ENSHGLG00100016261	-	100	65.759	ENSXCOG00000005312	frg1	100	65.370	Xiphophorus_couchianus
ENSHGLG00100016261	-	100	70.428	ENSXMAG00000007751	frg1	100	70.428	Xiphophorus_maculatus