EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100016281 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RAB%2C member of RAS oncogene family like 2B
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 45040 bases
Position: chrJH168132.1:10075-55114
Accession: 101720639
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100022116	MMR_HSR1	PF01926.23	1.8e-05	1	1
ENSHGLP00100022117	MMR_HSR1	PF01926.23	1.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100022345	-	3550	-	ENSHGLP00100022117	223 (aa)	XP_004845334	UPI00034FAB90
ENSHGLT00100022344	-	4223	-	ENSHGLP00100022116	223 (aa)	XP_004845334	UPI00034FAB90

Gene Model

Click here to download ENSHGLG00100016281's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100016281's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100016281	-	65	30.000	ENSHGLG00100015232	MRAS	77	31.056
ENSHGLG00100016281	-	76	34.463	ENSHGLG00100001213	RAB30	86	34.463
ENSHGLG00100016281	-	73	32.941	ENSHGLG00100008816	-	76	32.941
ENSHGLG00100016281	-	67	33.987	ENSHGLG00100015803	RAB2A	72	33.987
ENSHGLG00100016281	-	63	38.194	ENSHGLG00100013089	-	70	38.194
ENSHGLG00100016281	-	69	37.107	ENSHGLG00100003638	RAB11B	72	37.107
ENSHGLG00100016281	-	69	30.380	ENSHGLG00100016830	RAB25	74	30.380
ENSHGLG00100016281	-	67	36.774	ENSHGLG00100006292	RAB1B	77	36.774
ENSHGLG00100016281	-	67	31.373	ENSHGLG00100016679	RAB6B	74	31.373
ENSHGLG00100016281	-	65	33.333	ENSHGLG00100012557	-	69	33.333
ENSHGLG00100016281	-	62	37.931	ENSHGLG00100002929	RAB33B	63	37.931
ENSHGLG00100016281	-	66	36.184	ENSHGLG00100015502	-	74	36.184
ENSHGLG00100016281	-	67	38.065	ENSHGLG00100011237	RAB11A	71	38.065
ENSHGLG00100016281	-	75	34.807	ENSHGLG00100003190	RAB9B	88	34.807
ENSHGLG00100016281	-	67	35.256	ENSHGLG00100007553	RAB5A	71	35.256
ENSHGLG00100016281	-	88	33.831	ENSHGLG00100010554	RAB14	89	33.831
ENSHGLG00100016281	-	83	30.319	ENSHGLG00100014550	-	88	30.319
ENSHGLG00100016281	-	69	32.500	ENSHGLG00100000180	RAB39B	75	32.500
ENSHGLG00100016281	-	70	30.435	ENSHGLG00100012063	RAB15	95	30.332
ENSHGLG00100016281	-	63	37.838	ENSHGLG00100000293	RAB33A	62	37.838
ENSHGLG00100016281	-	73	35.928	ENSHGLG00100012955	RAB5B	78	35.928
ENSHGLG00100016281	-	53	31.746	ENSHGLG00100004198	ARFRP1	62	31.746
ENSHGLG00100016281	-	84	31.472	ENSHGLG00100008802	RAB7A	92	31.472
ENSHGLG00100016281	-	87	33.000	ENSHGLG00100007994	RAB1A	93	33.000
ENSHGLG00100016281	-	75	30.233	ENSHGLG00100010073	-	86	30.233
ENSHGLG00100016281	-	74	32.370	ENSHGLG00100019815	-	86	32.370
ENSHGLG00100016281	-	72	30.539	ENSHGLG00100001635	-	73	30.539
ENSHGLG00100016281	-	74	33.918	ENSHGLG00100009117	-	85	33.918

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100016281	-	99	88.688	ENSG00000079974	RABL2B	100	92.929	Homo_sapiens
ENSHGLG00100016281	-	99	88.688	ENSG00000144134	RABL2A	100	92.982	Homo_sapiens
ENSHGLG00100016281	-	99	73.423	ENSAPOG00000023708	rabl2	99	73.423	Acanthochromis_polyacanthus
ENSHGLG00100016281	-	100	86.344	ENSAMEG00000003173	-	100	86.344	Ailuropoda_melanoleuca
ENSHGLG00100016281	-	100	69.955	ENSACIG00000000670	rabl2	100	69.955	Amphilophus_citrinellus
ENSHGLG00100016281	-	99	73.874	ENSAOCG00000008069	rabl2	99	73.874	Amphiprion_ocellaris
ENSHGLG00100016281	-	99	73.423	ENSAPEG00000003164	rabl2	99	73.423	Amphiprion_percula
ENSHGLG00100016281	-	99	72.973	ENSATEG00000001111	rabl2	100	72.973	Anabas_testudineus
ENSHGLG00100016281	-	74	86.585	ENSACAG00000000418	-	93	86.585	Anolis_carolinensis
ENSHGLG00100016281	-	99	88.688	ENSANAG00000021001	-	97	88.688	Aotus_nancymaae
ENSHGLG00100016281	-	99	73.094	ENSACLG00000025632	rabl2	99	73.094	Astatotilapia_calliptera
ENSHGLG00100016281	-	97	77.315	ENSAMXG00000040611	rabl2	98	77.315	Astyanax_mexicanus
ENSHGLG00100016281	-	100	85.841	ENSBTAG00000004876	RABL2B	100	86.283	Bos_taurus
ENSHGLG00100016281	-	99	88.688	ENSCJAG00000018414	-	97	88.688	Callithrix_jacchus
ENSHGLG00100016281	-	100	90.135	ENSCAFG00020006938	-	100	90.135	Canis_lupus_dingo
ENSHGLG00100016281	-	100	83.117	ENSCHIG00000000591	-	100	83.550	Capra_hircus
ENSHGLG00100016281	-	99	87.783	ENSTSYG00000004323	-	97	87.783	Carlito_syrichta
ENSHGLG00100016281	-	96	93.023	ENSCPOG00000026899	-	97	93.023	Cavia_porcellus
ENSHGLG00100016281	-	99	90.045	ENSCCAG00000025944	-	97	90.045	Cebus_capucinus
ENSHGLG00100016281	-	99	87.330	ENSCATG00000034307	-	97	87.330	Cercocebus_atys
ENSHGLG00100016281	-	100	92.825	ENSCLAG00000017218	-	100	92.825	Chinchilla_lanigera
ENSHGLG00100016281	-	99	88.341	ENSCSAG00000004698	-	97	88.341	Chlorocebus_sabaeus
ENSHGLG00100016281	-	95	82.547	ENSCPBG00000011715	-	94	82.547	Chrysemys_picta_bellii
ENSHGLG00100016281	-	84	67.021	ENSCING00000004961	-	87	67.021	Ciona_intestinalis
ENSHGLG00100016281	-	81	68.889	ENSCSAVG00000006042	-	87	68.889	Ciona_savignyi
ENSHGLG00100016281	-	99	87.330	ENSCANG00000030879	-	97	87.330	Colobus_angolensis_palliatus
ENSHGLG00100016281	-	100	89.686	ENSCGRG00001021894	Rabl2	100	89.686	Cricetulus_griseus_chok1gshd
ENSHGLG00100016281	-	91	76.355	ENSCSEG00000005479	rabl2	97	73.272	Cynoglossus_semilaevis
ENSHGLG00100016281	-	100	72.197	ENSCVAG00000011432	rabl2	100	72.197	Cyprinodon_variegatus
ENSHGLG00100016281	-	95	74.057	ENSDARG00000063321	rabl2	96	74.057	Danio_rerio
ENSHGLG00100016281	-	99	90.950	ENSDNOG00000035151	-	99	90.950	Dasypus_novemcinctus
ENSHGLG00100016281	-	99	92.760	ENSDORG00000000003	Rabl2	99	92.760	Dipodomys_ordii
ENSHGLG00100016281	-	100	88.789	ENSEASG00005008239	-	100	88.789	Equus_asinus_asinus
ENSHGLG00100016281	-	100	88.789	ENSECAG00000026942	-	100	88.789	Equus_caballus
ENSHGLG00100016281	-	100	89.686	ENSFCAG00000033642	-	100	89.686	Felis_catus
ENSHGLG00100016281	-	100	94.170	ENSFDAG00000002113	-	100	94.170	Fukomys_damarensis
ENSHGLG00100016281	-	99	73.636	ENSFHEG00000015015	rabl2	83	73.636	Fundulus_heteroclitus
ENSHGLG00100016281	-	88	75.635	ENSGMOG00000018928	rabl2	100	75.635	Gadus_morhua
ENSHGLG00100016281	-	92	79.612	ENSGALG00000032458	RABL2B	92	79.612	Gallus_gallus
ENSHGLG00100016281	-	96	74.766	ENSGAFG00000005188	rabl2	96	74.766	Gambusia_affinis
ENSHGLG00100016281	-	93	75.362	ENSGACG00000012474	rabl2	94	75.362	Gasterosteus_aculeatus
ENSHGLG00100016281	-	99	73.094	ENSHBUG00000010964	rabl2	99	73.094	Haplochromis_burtoni
ENSHGLG00100016281	-	100	100.000	ENSHGLG00000005750	-	100	100.000	Heterocephalus_glaber_female
ENSHGLG00100016281	-	100	93.722	ENSSTOG00000002723	-	100	93.722	Ictidomys_tridecemlineatus
ENSHGLG00100016281	-	99	88.789	ENSJJAG00000010792	Rabl2	100	88.789	Jaculus_jaculus
ENSHGLG00100016281	-	99	73.874	ENSKMAG00000012723	rabl2	99	73.874	Kryptolebias_marmoratus
ENSHGLG00100016281	-	99	73.874	ENSLBEG00000003644	rabl2	99	73.874	Labrus_bergylta
ENSHGLG00100016281	-	99	77.130	ENSLACG00000003722	rabl2	99	77.130	Latimeria_chalumnae
ENSHGLG00100016281	-	92	80.097	ENSLOCG00000016767	rabl2	91	80.097	Lepisosteus_oculatus
ENSHGLG00100016281	-	99	88.688	ENSMFAG00000044775	-	97	88.688	Macaca_fascicularis
ENSHGLG00100016281	-	99	88.688	ENSMMUG00000022914	RABL2B	97	88.688	Macaca_mulatta
ENSHGLG00100016281	-	99	88.235	ENSMNEG00000028460	-	96	88.235	Macaca_nemestrina
ENSHGLG00100016281	-	99	87.330	ENSMLEG00000032621	-	96	87.330	Mandrillus_leucophaeus
ENSHGLG00100016281	-	99	73.423	ENSMAMG00000008168	rabl2	99	73.423	Mastacembelus_armatus
ENSHGLG00100016281	-	99	71.171	ENSMZEG00005019758	rabl2	99	71.171	Maylandia_zebra
ENSHGLG00100016281	-	99	88.235	ENSMAUG00000010955	Rabl2	99	88.235	Mesocricetus_auratus
ENSHGLG00100016281	-	99	92.760	ENSMICG00000031301	-	97	92.760	Microcebus_murinus
ENSHGLG00100016281	-	99	88.688	ENSMOCG00000002775	Rabl2	99	88.688	Microtus_ochrogaster
ENSHGLG00100016281	-	87	91.795	ENSMODG00000010838	-	89	91.795	Monodelphis_domestica
ENSHGLG00100016281	-	99	72.973	ENSMALG00000005944	rabl2	99	72.973	Monopterus_albus
ENSHGLG00100016281	-	100	86.099	MGP_CAROLIEiJ_G0020176	Rabl2	99	86.099	Mus_caroli
ENSHGLG00100016281	-	100	86.547	ENSMUSG00000022621	Rabl2	100	86.547	Mus_musculus
ENSHGLG00100016281	-	100	86.996	MGP_PahariEiJ_G0020181	Rabl2	100	86.996	Mus_pahari
ENSHGLG00100016281	-	100	86.099	MGP_SPRETEiJ_G0021073	Rabl2	100	86.099	Mus_spretus
ENSHGLG00100016281	-	100	89.238	ENSMPUG00000001806	-	100	89.238	Mustela_putorius_furo
ENSHGLG00100016281	-	98	86.301	ENSNGAG00000012843	Rabl2	95	86.301	Nannospalax_galili
ENSHGLG00100016281	-	99	73.094	ENSNBRG00000000489	rabl2	99	73.094	Neolamprologus_brichardi
ENSHGLG00100016281	-	99	89.140	ENSNLEG00000030435	-	96	89.140	Nomascus_leucogenys
ENSHGLG00100016281	-	100	92.377	ENSODEG00000015650	-	100	92.377	Octodon_degus
ENSHGLG00100016281	-	99	73.543	ENSONIG00000014885	rabl2	99	73.543	Oreochromis_niloticus
ENSHGLG00100016281	-	93	73.558	ENSORLG00000009874	rabl2	92	73.558	Oryzias_latipes
ENSHGLG00100016281	-	93	73.558	ENSORLG00020001721	rabl2	92	73.558	Oryzias_latipes_hni
ENSHGLG00100016281	-	93	73.558	ENSORLG00015014268	rabl2	92	73.558	Oryzias_latipes_hsok
ENSHGLG00100016281	-	93	74.519	ENSOMEG00000008576	rabl2	96	74.519	Oryzias_melastigma
ENSHGLG00100016281	-	99	93.665	ENSOGAG00000009123	-	97	93.665	Otolemur_garnettii
ENSHGLG00100016281	-	96	89.862	ENSPPRG00000014642	-	95	89.862	Panthera_pardus
ENSHGLG00100016281	-	100	89.686	ENSPTIG00000018747	-	100	89.686	Panthera_tigris_altaica
ENSHGLG00100016281	-	99	83.550	ENSPTRG00000014555	-	97	83.550	Pan_troglodytes
ENSHGLG00100016281	-	99	83.913	ENSPANG00000036121	-	96	83.913	Papio_anubis
ENSHGLG00100016281	-	92	79.126	ENSPKIG00000025372	rabl2	92	79.126	Paramormyrops_kingsleyae
ENSHGLG00100016281	-	95	83.886	ENSPSIG00000014041	-	93	83.886	Pelodiscus_sinensis
ENSHGLG00100016281	-	88	75.127	ENSPMGG00000012946	rabl2	96	75.127	Periophthalmus_magnuspinnatus
ENSHGLG00100016281	-	100	88.789	ENSPEMG00000024045	Rabl2	100	88.789	Peromyscus_maniculatus_bairdii
ENSHGLG00100016281	-	95	83.945	ENSPCIG00000012436	-	84	88.350	Phascolarctos_cinereus
ENSHGLG00100016281	-	96	75.000	ENSPFOG00000017960	rabl2	96	75.000	Poecilia_formosa
ENSHGLG00100016281	-	96	75.701	ENSPLAG00000015685	rabl2	96	75.701	Poecilia_latipinna
ENSHGLG00100016281	-	96	75.701	ENSPMEG00000004703	rabl2	96	75.701	Poecilia_mexicana
ENSHGLG00100016281	-	87	78.351	ENSPREG00000014761	rabl2	96	78.351	Poecilia_reticulata
ENSHGLG00100016281	-	99	89.140	ENSPPYG00000012000	-	97	89.140	Pongo_abelii
ENSHGLG00100016281	-	99	92.760	ENSPCOG00000024865	-	97	92.760	Propithecus_coquereli
ENSHGLG00100016281	-	99	83.691	ENSPVAG00000004539	-	98	83.691	Pteropus_vampyrus
ENSHGLG00100016281	-	99	73.094	ENSPNYG00000004845	rabl2	99	73.094	Pundamilia_nyererei
ENSHGLG00100016281	-	90	80.597	ENSPNAG00000024254	rabl2	99	76.577	Pygocentrus_nattereri
ENSHGLG00100016281	-	100	87.444	ENSRNOG00000013947	Rabl2	89	87.444	Rattus_norvegicus
ENSHGLG00100016281	-	99	88.235	ENSRBIG00000033607	-	97	88.235	Rhinopithecus_bieti
ENSHGLG00100016281	-	99	88.688	ENSRROG00000031130	-	97	88.688	Rhinopithecus_roxellana
ENSHGLG00100016281	-	99	90.498	ENSSBOG00000033266	-	97	90.498	Saimiri_boliviensis_boliviensis
ENSHGLG00100016281	-	91	77.451	ENSSFOG00015020738	rabl2	95	75.472	Scleropages_formosus
ENSHGLG00100016281	-	100	73.094	ENSSMAG00000004606	rabl2	100	73.094	Scophthalmus_maximus
ENSHGLG00100016281	-	100	73.094	ENSSDUG00000014765	rabl2	100	73.094	Seriola_dumerili
ENSHGLG00100016281	-	76	90.588	ENSSSCG00000025041	-	100	90.588	Sus_scrofa
ENSHGLG00100016281	-	91	76.471	ENSTGUG00000016028	-	98	76.471	Taeniopygia_guttata
ENSHGLG00100016281	-	100	72.646	ENSTRUG00000012454	rabl2	100	72.646	Takifugu_rubripes
ENSHGLG00100016281	-	99	72.523	ENSTNIG00000017951	rabl2	99	72.523	Tetraodon_nigroviridis
ENSHGLG00100016281	-	91	89.604	ENSUAMG00000015761	-	90	89.604	Ursus_americanus
ENSHGLG00100016281	-	100	88.789	ENSUMAG00000017116	-	100	88.789	Ursus_maritimus
ENSHGLG00100016281	-	100	89.238	ENSVVUG00000025761	-	100	89.238	Vulpes_vulpes
ENSHGLG00100016281	-	96	76.526	ENSXETG00000015712	rabl2b	95	76.526	Xenopus_tropicalis
ENSHGLG00100016281	-	96	75.234	ENSXMAG00000004569	rabl2	96	75.234	Xiphophorus_maculatus