EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00100016421 (Gene tree)
Gene ID: -
Gene Symbol: TRNT1
Alias: CCA1|CGI-47|MtCCA
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 17891 bases
Position: chrJH170775.1:143047-160937
Accession: 17341
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100022316	PolyA_pol	PF01743.20	4.3e-32	1	1
ENSHGLP00100022317	PolyA_pol	PF01743.20	4.1e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100022549	TRNT1-201	1290	-	ENSHGLP00100022316	429 (aa)	-	-
ENSHGLT00100022550	TRNT1-202	603	-	ENSHGLP00100022317	201 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100016421's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100016421's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100016421	TRNT1	99	91.224	ENSG00000072756	TRNT1	99	91.224	Homo_sapiens
ENSHGLG00100016421	TRNT1	98	64.151	ENSAPOG00000013687	trnt1	99	64.151	Acanthochromis_polyacanthus
ENSHGLG00100016421	TRNT1	99	89.425	ENSAMEG00000014520	TRNT1	99	89.425	Ailuropoda_melanoleuca
ENSHGLG00100016421	TRNT1	98	65.882	ENSACIG00000021706	trnt1	99	65.882	Amphilophus_citrinellus
ENSHGLG00100016421	TRNT1	98	65.412	ENSAOCG00000024612	trnt1	99	65.412	Amphiprion_ocellaris
ENSHGLG00100016421	TRNT1	96	58.753	ENSAPEG00000022627	trnt1	97	58.753	Amphiprion_percula
ENSHGLG00100016421	TRNT1	93	68.238	ENSATEG00000008928	trnt1	99	68.238	Anabas_testudineus
ENSHGLG00100016421	TRNT1	89	74.935	ENSAPLG00000004258	TRNT1	96	74.935	Anas_platyrhynchos
ENSHGLG00100016421	TRNT1	99	74.365	ENSACAG00000005657	TRNT1	99	74.365	Anolis_carolinensis
ENSHGLG00100016421	TRNT1	99	90.531	ENSANAG00000024802	TRNT1	99	90.531	Aotus_nancymaae
ENSHGLG00100016421	TRNT1	98	65.412	ENSACLG00000022227	trnt1	99	65.412	Astatotilapia_calliptera
ENSHGLG00100016421	TRNT1	97	66.746	ENSAMXG00000003960	trnt1	97	66.746	Astyanax_mexicanus
ENSHGLG00100016421	TRNT1	99	88.915	ENSBTAG00000019534	TRNT1	99	88.915	Bos_taurus
ENSHGLG00100016421	TRNT1	81	60.571	WBGene00010089	hpo-31	94	43.914	Caenorhabditis_elegans
ENSHGLG00100016421	TRNT1	99	90.531	ENSCJAG00000015466	TRNT1	99	90.531	Callithrix_jacchus
ENSHGLG00100016421	TRNT1	99	88.684	ENSCAFG00000005985	TRNT1	99	88.684	Canis_familiaris
ENSHGLG00100016421	TRNT1	99	88.684	ENSCAFG00020014746	TRNT1	99	88.684	Canis_lupus_dingo
ENSHGLG00100016421	TRNT1	99	88.684	ENSCHIG00000007030	TRNT1	99	88.684	Capra_hircus
ENSHGLG00100016421	TRNT1	99	91.224	ENSTSYG00000013390	TRNT1	99	91.224	Carlito_syrichta
ENSHGLG00100016421	TRNT1	87	76.139	ENSCAPG00000006891	TRNT1	100	76.139	Cavia_aperea
ENSHGLG00100016421	TRNT1	100	92.396	ENSCPOG00000007849	TRNT1	100	92.396	Cavia_porcellus
ENSHGLG00100016421	TRNT1	95	87.229	ENSCCAG00000002919	TRNT1	99	89.250	Cebus_capucinus
ENSHGLG00100016421	TRNT1	100	90.783	ENSCATG00000031985	TRNT1	99	90.783	Cercocebus_atys
ENSHGLG00100016421	TRNT1	100	93.779	ENSCLAG00000005186	TRNT1	100	93.779	Chinchilla_lanigera
ENSHGLG00100016421	TRNT1	99	91.224	ENSCSAG00000011052	TRNT1	99	91.224	Chlorocebus_sabaeus
ENSHGLG00100016421	TRNT1	95	84.158	ENSCHOG00000005712	TRNT1	85	89.091	Choloepus_hoffmanni
ENSHGLG00100016421	TRNT1	94	80.196	ENSCPBG00000017636	TRNT1	93	80.196	Chrysemys_picta_bellii
ENSHGLG00100016421	TRNT1	80	60.116	ENSCING00000007069	-	99	44.282	Ciona_intestinalis
ENSHGLG00100016421	TRNT1	89	56.021	ENSCSAVG00000007494	-	99	44.104	Ciona_savignyi
ENSHGLG00100016421	TRNT1	99	90.762	ENSCANG00000039030	TRNT1	99	90.762	Colobus_angolensis_palliatus
ENSHGLG00100016421	TRNT1	99	90.762	ENSCGRG00001009998	Trnt1	99	90.762	Cricetulus_griseus_chok1gshd
ENSHGLG00100016421	TRNT1	99	90.762	ENSCGRG00000013410	Trnt1	99	90.762	Cricetulus_griseus_crigri
ENSHGLG00100016421	TRNT1	94	66.176	ENSCSEG00000008157	trnt1	96	66.176	Cynoglossus_semilaevis
ENSHGLG00100016421	TRNT1	94	67.402	ENSCVAG00000019770	trnt1	96	67.402	Cyprinodon_variegatus
ENSHGLG00100016421	TRNT1	97	67.696	ENSDARG00000075297	trnt1	97	67.696	Danio_rerio
ENSHGLG00100016421	TRNT1	99	88.453	ENSDNOG00000008837	TRNT1	99	88.453	Dasypus_novemcinctus
ENSHGLG00100016421	TRNT1	99	88.684	ENSDORG00000014035	Trnt1	99	88.684	Dipodomys_ordii
ENSHGLG00100016421	TRNT1	80	64.162	FBgn0037369	CG2100	83	48.642	Drosophila_melanogaster
ENSHGLG00100016421	TRNT1	89	81.152	ENSETEG00000018177	TRNT1	100	85.944	Echinops_telfairi
ENSHGLG00100016421	TRNT1	93	60.546	ENSEBUG00000012779	-	95	60.546	Eptatretus_burgeri
ENSHGLG00100016421	TRNT1	99	89.607	ENSEASG00005003577	TRNT1	99	89.607	Equus_asinus_asinus
ENSHGLG00100016421	TRNT1	99	89.838	ENSECAG00000014420	TRNT1	99	89.838	Equus_caballus
ENSHGLG00100016421	TRNT1	99	86.374	ENSEEUG00000009567	TRNT1	99	86.374	Erinaceus_europaeus
ENSHGLG00100016421	TRNT1	98	66.900	ENSELUG00000003802	trnt1	99	66.900	Esox_lucius
ENSHGLG00100016421	TRNT1	99	89.607	ENSFCAG00000026805	TRNT1	99	89.607	Felis_catus
ENSHGLG00100016421	TRNT1	88	73.698	ENSFALG00000013539	TRNT1	99	73.698	Ficedula_albicollis
ENSHGLG00100016421	TRNT1	100	93.548	ENSFDAG00000018412	TRNT1	100	93.548	Fukomys_damarensis
ENSHGLG00100016421	TRNT1	96	65.957	ENSFHEG00000019294	trnt1	99	65.957	Fundulus_heteroclitus
ENSHGLG00100016421	TRNT1	94	66.830	ENSGMOG00000007460	trnt1	96	66.830	Gadus_morhua
ENSHGLG00100016421	TRNT1	95	72.705	ENSGALG00000017368	TRNT1	96	72.705	Gallus_gallus
ENSHGLG00100016421	TRNT1	94	67.157	ENSGAFG00000008647	trnt1	96	67.157	Gambusia_affinis
ENSHGLG00100016421	TRNT1	98	63.294	ENSGACG00000011903	trnt1	99	63.294	Gasterosteus_aculeatus
ENSHGLG00100016421	TRNT1	99	77.442	ENSGAGG00000020942	TRNT1	97	77.442	Gopherus_agassizii
ENSHGLG00100016421	TRNT1	99	91.455	ENSGGOG00000015286	TRNT1	99	91.455	Gorilla_gorilla
ENSHGLG00100016421	TRNT1	98	65.412	ENSHBUG00000002797	trnt1	99	65.412	Haplochromis_burtoni
ENSHGLG00100016421	TRNT1	100	98.848	ENSHGLG00000003649	TRNT1	100	98.848	Heterocephalus_glaber_female
ENSHGLG00100016421	TRNT1	100	88.506	ENSHGLG00000000221	-	100	88.506	Heterocephalus_glaber_female
ENSHGLG00100016421	TRNT1	94	65.686	ENSHCOG00000010618	trnt1	96	65.686	Hippocampus_comes
ENSHGLG00100016421	TRNT1	96	66.747	ENSIPUG00000000971	trnt1	96	66.747	Ictalurus_punctatus
ENSHGLG00100016421	TRNT1	99	87.991	ENSSTOG00000000150	TRNT1	98	91.089	Ictidomys_tridecemlineatus
ENSHGLG00100016421	TRNT1	99	90.300	ENSJJAG00000018561	Trnt1	99	90.300	Jaculus_jaculus
ENSHGLG00100016421	TRNT1	96	65.566	ENSKMAG00000011307	trnt1	99	65.566	Kryptolebias_marmoratus
ENSHGLG00100016421	TRNT1	95	66.502	ENSLBEG00000019457	trnt1	97	61.463	Labrus_bergylta
ENSHGLG00100016421	TRNT1	99	70.901	ENSLACG00000013227	TRNT1	99	70.901	Latimeria_chalumnae
ENSHGLG00100016421	TRNT1	97	70.071	ENSLOCG00000011105	trnt1	95	70.071	Lepisosteus_oculatus
ENSHGLG00100016421	TRNT1	99	90.069	ENSLAFG00000023191	TRNT1	99	90.069	Loxodonta_africana
ENSHGLG00100016421	TRNT1	100	91.014	ENSMFAG00000045113	TRNT1	99	91.014	Macaca_fascicularis
ENSHGLG00100016421	TRNT1	100	91.014	ENSMMUG00000017983	TRNT1	99	91.014	Macaca_mulatta
ENSHGLG00100016421	TRNT1	100	91.014	ENSMNEG00000037805	TRNT1	99	91.014	Macaca_nemestrina
ENSHGLG00100016421	TRNT1	88	91.885	ENSMLEG00000033671	TRNT1	99	91.885	Mandrillus_leucophaeus
ENSHGLG00100016421	TRNT1	98	65.647	ENSMAMG00000023401	trnt1	99	65.647	Mastacembelus_armatus
ENSHGLG00100016421	TRNT1	98	65.412	ENSMZEG00005009141	trnt1	99	65.412	Maylandia_zebra
ENSHGLG00100016421	TRNT1	75	75.312	ENSMGAG00000009971	TRNT1	99	75.312	Meleagris_gallopavo
ENSHGLG00100016421	TRNT1	99	90.993	ENSMAUG00000020707	Trnt1	99	90.993	Mesocricetus_auratus
ENSHGLG00100016421	TRNT1	99	91.224	ENSMICG00000016615	TRNT1	99	91.224	Microcebus_murinus
ENSHGLG00100016421	TRNT1	99	89.838	ENSMOCG00000004539	Trnt1	99	89.838	Microtus_ochrogaster
ENSHGLG00100016421	TRNT1	98	64.471	ENSMMOG00000010742	trnt1	99	64.471	Mola_mola
ENSHGLG00100016421	TRNT1	99	82.448	ENSMODG00000004368	TRNT1	99	82.448	Monodelphis_domestica
ENSHGLG00100016421	TRNT1	98	64.471	ENSMALG00000008376	trnt1	99	64.471	Monopterus_albus
ENSHGLG00100016421	TRNT1	99	92.075	MGP_CAROLIEiJ_G0028698	Trnt1	99	92.075	Mus_caroli
ENSHGLG00100016421	TRNT1	99	91.608	ENSMUSG00000013736	Trnt1	99	91.608	Mus_musculus
ENSHGLG00100016421	TRNT1	99	90.762	MGP_PahariEiJ_G0022449	Trnt1	99	90.762	Mus_pahari
ENSHGLG00100016421	TRNT1	99	91.608	MGP_SPRETEiJ_G0029726	Trnt1	99	91.608	Mus_spretus
ENSHGLG00100016421	TRNT1	99	90.300	ENSMPUG00000017017	TRNT1	99	90.300	Mustela_putorius_furo
ENSHGLG00100016421	TRNT1	89	85.714	ENSMLUG00000011864	TRNT1	99	85.714	Myotis_lucifugus
ENSHGLG00100016421	TRNT1	99	90.531	ENSNGAG00000000537	Trnt1	99	90.531	Nannospalax_galili
ENSHGLG00100016421	TRNT1	91	68.718	ENSNBRG00000023606	trnt1	99	65.217	Neolamprologus_brichardi
ENSHGLG00100016421	TRNT1	99	91.455	ENSNLEG00000003226	TRNT1	99	91.455	Nomascus_leucogenys
ENSHGLG00100016421	TRNT1	99	82.910	ENSMEUG00000004684	TRNT1	99	82.910	Notamacropus_eugenii
ENSHGLG00100016421	TRNT1	88	78.125	ENSOPRG00000015067	TRNT1	99	78.125	Ochotona_princeps
ENSHGLG00100016421	TRNT1	100	93.318	ENSODEG00000007597	TRNT1	100	93.318	Octodon_degus
ENSHGLG00100016421	TRNT1	98	65.412	ENSONIG00000020273	trnt1	98	65.412	Oreochromis_niloticus
ENSHGLG00100016421	TRNT1	99	72.917	ENSOANG00000007514	TRNT1	99	72.917	Ornithorhynchus_anatinus
ENSHGLG00100016421	TRNT1	99	83.834	ENSOCUG00000008580	TRNT1	99	83.834	Oryctolagus_cuniculus
ENSHGLG00100016421	TRNT1	97	64.286	ENSORLG00000003165	trnt1	99	64.286	Oryzias_latipes
ENSHGLG00100016421	TRNT1	97	64.524	ENSORLG00020022060	trnt1	99	64.524	Oryzias_latipes_hni
ENSHGLG00100016421	TRNT1	92	67.677	ENSORLG00015018915	trnt1	99	63.208	Oryzias_latipes_hsok
ENSHGLG00100016421	TRNT1	89	70.526	ENSOMEG00000003331	trnt1	97	64.078	Oryzias_melastigma
ENSHGLG00100016421	TRNT1	99	88.453	ENSOARG00000008631	TRNT1	99	88.453	Ovis_aries
ENSHGLG00100016421	TRNT1	99	91.455	ENSPPAG00000043566	TRNT1	99	91.455	Pan_paniscus
ENSHGLG00100016421	TRNT1	99	89.607	ENSPPRG00000001327	TRNT1	99	89.607	Panthera_pardus
ENSHGLG00100016421	TRNT1	99	89.607	ENSPTIG00000011448	TRNT1	99	89.607	Panthera_tigris_altaica
ENSHGLG00100016421	TRNT1	99	91.455	ENSPTRG00000014564	TRNT1	99	91.455	Pan_troglodytes
ENSHGLG00100016421	TRNT1	100	90.783	ENSPANG00000025944	TRNT1	99	90.783	Papio_anubis
ENSHGLG00100016421	TRNT1	94	68.949	ENSPKIG00000020015	trnt1	95	68.949	Paramormyrops_kingsleyae
ENSHGLG00100016421	TRNT1	91	78.535	ENSPSIG00000017356	TRNT1	99	80.000	Pelodiscus_sinensis
ENSHGLG00100016421	TRNT1	98	66.118	ENSPMGG00000008888	trnt1	98	66.118	Periophthalmus_magnuspinnatus
ENSHGLG00100016421	TRNT1	99	91.455	ENSPEMG00000019845	Trnt1	99	91.455	Peromyscus_maniculatus_bairdii
ENSHGLG00100016421	TRNT1	99	82.910	ENSPCIG00000030436	TRNT1	99	82.910	Phascolarctos_cinereus
ENSHGLG00100016421	TRNT1	94	66.667	ENSPFOG00000006194	trnt1	96	66.667	Poecilia_formosa
ENSHGLG00100016421	TRNT1	94	66.667	ENSPLAG00000015623	trnt1	99	66.501	Poecilia_latipinna
ENSHGLG00100016421	TRNT1	94	66.667	ENSPMEG00000012216	trnt1	99	66.501	Poecilia_mexicana
ENSHGLG00100016421	TRNT1	94	66.585	ENSPREG00000021470	trnt1	96	66.585	Poecilia_reticulata
ENSHGLG00100016421	TRNT1	99	91.686	ENSPPYG00000013702	TRNT1	99	91.686	Pongo_abelii
ENSHGLG00100016421	TRNT1	88	88.773	ENSPCAG00000001951	TRNT1	100	88.773	Procavia_capensis
ENSHGLG00100016421	TRNT1	99	91.224	ENSPCOG00000022228	TRNT1	99	91.224	Propithecus_coquereli
ENSHGLG00100016421	TRNT1	88	87.467	ENSPVAG00000008784	TRNT1	99	87.467	Pteropus_vampyrus
ENSHGLG00100016421	TRNT1	98	65.412	ENSPNYG00000003120	trnt1	99	65.412	Pundamilia_nyererei
ENSHGLG00100016421	TRNT1	97	66.271	ENSPNAG00000000565	trnt1	97	66.271	Pygocentrus_nattereri
ENSHGLG00100016421	TRNT1	99	92.308	ENSRNOG00000006432	Trnt1	99	92.308	Rattus_norvegicus
ENSHGLG00100016421	TRNT1	99	88.684	ENSRBIG00000042632	TRNT1	99	88.684	Rhinopithecus_bieti
ENSHGLG00100016421	TRNT1	99	90.531	ENSRROG00000036866	TRNT1	99	90.531	Rhinopithecus_roxellana
ENSHGLG00100016421	TRNT1	99	90.531	ENSSBOG00000021208	TRNT1	99	90.531	Saimiri_boliviensis_boliviensis
ENSHGLG00100016421	TRNT1	99	82.217	ENSSHAG00000018861	TRNT1	99	82.217	Sarcophilus_harrisii
ENSHGLG00100016421	TRNT1	94	69.287	ENSSFOG00015020844	trnt1	94	69.287	Scleropages_formosus
ENSHGLG00100016421	TRNT1	98	65.882	ENSSMAG00000015432	trnt1	97	65.882	Scophthalmus_maximus
ENSHGLG00100016421	TRNT1	98	64.471	ENSSDUG00000012320	trnt1	99	64.471	Seriola_dumerili
ENSHGLG00100016421	TRNT1	98	64.471	ENSSLDG00000009325	trnt1	99	64.471	Seriola_lalandi_dorsalis
ENSHGLG00100016421	TRNT1	65	56.184	ENSSLDG00000016463	-	97	60.236	Seriola_lalandi_dorsalis
ENSHGLG00100016421	TRNT1	88	80.418	ENSSPUG00000014153	TRNT1	99	80.418	Sphenodon_punctatus
ENSHGLG00100016421	TRNT1	98	64.471	ENSSPAG00000021005	trnt1	99	64.471	Stegastes_partitus
ENSHGLG00100016421	TRNT1	99	89.607	ENSSSCG00000011529	TRNT1	99	89.607	Sus_scrofa
ENSHGLG00100016421	TRNT1	93	73.827	ENSTGUG00000010192	TRNT1	99	73.827	Taeniopygia_guttata
ENSHGLG00100016421	TRNT1	98	65.412	ENSTRUG00000001088	trnt1	99	65.412	Takifugu_rubripes
ENSHGLG00100016421	TRNT1	99	65.654	ENSTNIG00000007363	trnt1	99	65.654	Tetraodon_nigroviridis
ENSHGLG00100016421	TRNT1	74	83.750	ENSTBEG00000006367	TRNT1	100	75.655	Tupaia_belangeri
ENSHGLG00100016421	TRNT1	99	88.684	ENSTTRG00000007803	TRNT1	99	88.684	Tursiops_truncatus
ENSHGLG00100016421	TRNT1	99	88.915	ENSUAMG00000022574	TRNT1	99	88.915	Ursus_americanus
ENSHGLG00100016421	TRNT1	99	89.376	ENSUMAG00000024092	TRNT1	99	89.376	Ursus_maritimus
ENSHGLG00100016421	TRNT1	99	88.915	ENSVVUG00000012810	TRNT1	99	88.915	Vulpes_vulpes
ENSHGLG00100016421	TRNT1	95	64.663	ENSXETG00000025091	trnt1	99	65.423	Xenopus_tropicalis
ENSHGLG00100016421	TRNT1	94	67.157	ENSXCOG00000010150	trnt1	96	67.157	Xiphophorus_couchianus
ENSHGLG00100016421	TRNT1	94	66.667	ENSXMAG00000002227	trnt1	96	66.667	Xiphophorus_maculatus