EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100016535 (Gene tree)
Gene ID: -
Gene Symbol: VARS2
Alias: DKFZP434L1435|G7a|KIAA1885|VARS2L|VARSL
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 13827 bases
Position: chrJH173151.1:461024-474850
Accession: 101726746
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100022483	tRNA-synt_1g	PF09334.11	1.5e-14	1	1
ENSHGLP00100022482	tRNA-synt_1g	PF09334.11	1.8e-14	1	1
ENSHGLP00100022483	Anticodon_1	PF08264.13	4.2e-28	1	1
ENSHGLP00100022482	Anticodon_1	PF08264.13	4.4e-28	1	1
ENSHGLP00100022483	tRNA-synt_1	PF00133.22	8e-181	1	1
ENSHGLP00100022482	tRNA-synt_1	PF00133.22	9e-181	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100022716	VARS2-202	3523	XM_013072881	ENSHGLP00100022483	1063 (aa)	XP_012928335	UPI00034F5CF4
ENSHGLT00100022715	VARS2-201	3625	-	ENSHGLP00100022482	1097 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100016535's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100016535's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100016535	VARS2	98	46.019	ENSHGLG00100018062	VARS	88	45.741

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100016535	VARS2	93	50.977	ENSAPOG00000007396	vars2	96	49.906	Acanthochromis_polyacanthus
ENSHGLG00100016535	VARS2	99	81.827	ENSAMEG00000012997	VARS2	97	81.827	Ailuropoda_melanoleuca
ENSHGLG00100016535	VARS2	98	49.812	ENSACIG00000004344	vars2	99	49.719	Amphilophus_citrinellus
ENSHGLG00100016535	VARS2	93	50.732	ENSAOCG00000000476	vars2	97	49.953	Amphiprion_ocellaris
ENSHGLG00100016535	VARS2	93	50.732	ENSAPEG00000008646	vars2	95	49.720	Amphiprion_percula
ENSHGLG00100016535	VARS2	91	52.568	ENSATEG00000012291	vars2	96	51.109	Anabas_testudineus
ENSHGLG00100016535	VARS2	95	57.849	ENSACAG00000022093	VARS2	95	57.655	Anolis_carolinensis
ENSHGLG00100016535	VARS2	99	83.035	ENSANAG00000038018	VARS2	99	83.035	Aotus_nancymaae
ENSHGLG00100016535	VARS2	98	51.165	ENSACLG00000018673	vars2	99	51.072	Astatotilapia_calliptera
ENSHGLG00100016535	VARS2	95	52.471	ENSAMXG00000017773	vars2	98	54.006	Astyanax_mexicanus
ENSHGLG00100016535	VARS2	99	83.049	ENSBTAG00000010698	VARS2	99	83.035	Bos_taurus
ENSHGLG00100016535	VARS2	99	83.129	ENSCJAG00000019826	VARS2	99	83.129	Callithrix_jacchus
ENSHGLG00100016535	VARS2	99	80.791	ENSCAFG00000000454	VARS2	99	80.791	Canis_familiaris
ENSHGLG00100016535	VARS2	87	80.798	ENSCAFG00020019387	VARS2	95	80.860	Canis_lupus_dingo
ENSHGLG00100016535	VARS2	99	82.938	ENSCHIG00000007847	VARS2	99	82.846	Capra_hircus
ENSHGLG00100016535	VARS2	99	82.658	ENSTSYG00000009904	VARS2	99	82.658	Carlito_syrichta
ENSHGLG00100016535	VARS2	88	86.724	ENSCAPG00000017770	VARS2	100	86.724	Cavia_aperea
ENSHGLG00100016535	VARS2	100	85.822	ENSCPOG00000021834	VARS2	100	85.822	Cavia_porcellus
ENSHGLG00100016535	VARS2	99	83.600	ENSCCAG00000037907	VARS2	99	83.600	Cebus_capucinus
ENSHGLG00100016535	VARS2	99	84.449	ENSCATG00000032554	VARS2	99	84.449	Cercocebus_atys
ENSHGLG00100016535	VARS2	100	86.924	ENSCLAG00000002889	VARS2	100	86.924	Chinchilla_lanigera
ENSHGLG00100016535	VARS2	99	83.977	ENSCSAG00000008327	VARS2	99	83.977	Chlorocebus_sabaeus
ENSHGLG00100016535	VARS2	90	60.946	ENSCPBG00000021502	VARS2	96	60.843	Chrysemys_picta_bellii
ENSHGLG00100016535	VARS2	99	84.072	ENSCANG00000014991	VARS2	99	84.072	Colobus_angolensis_palliatus
ENSHGLG00100016535	VARS2	98	80.574	ENSCGRG00001021535	Vars2	99	80.453	Cricetulus_griseus_chok1gshd
ENSHGLG00100016535	VARS2	98	80.574	ENSCGRG00000014112	Vars2	99	80.453	Cricetulus_griseus_crigri
ENSHGLG00100016535	VARS2	87	55.902	ENSCSEG00000015432	vars2	90	66.667	Cynoglossus_semilaevis
ENSHGLG00100016535	VARS2	64	51.773	ENSCVAG00000017765	vars2	97	51.631	Cyprinodon_variegatus
ENSHGLG00100016535	VARS2	95	52.114	ENSDARG00000056717	vars2	95	52.016	Danio_rerio
ENSHGLG00100016535	VARS2	79	84.167	ENSDORG00000008516	Vars2	93	84.167	Dipodomys_ordii
ENSHGLG00100016535	VARS2	99	72.667	ENSETEG00000014844	VARS2	99	72.667	Echinops_telfairi
ENSHGLG00100016535	VARS2	99	83.710	ENSEASG00005019997	VARS2	97	83.710	Equus_asinus_asinus
ENSHGLG00100016535	VARS2	99	84.652	ENSECAG00000018202	VARS2	99	84.652	Equus_caballus
ENSHGLG00100016535	VARS2	63	74.757	ENSEEUG00000012591	-	63	74.757	Erinaceus_europaeus
ENSHGLG00100016535	VARS2	93	52.035	ENSELUG00000017824	vars2	96	51.458	Esox_lucius
ENSHGLG00100016535	VARS2	99	81.733	ENSFCAG00000010531	VARS2	99	81.733	Felis_catus
ENSHGLG00100016535	VARS2	100	88.899	ENSFDAG00000017216	VARS2	100	88.899	Fukomys_damarensis
ENSHGLG00100016535	VARS2	86	52.000	ENSFHEG00000013932	vars2	96	49.899	Fundulus_heteroclitus
ENSHGLG00100016535	VARS2	88	55.100	ENSGMOG00000018960	vars2	98	54.890	Gadus_morhua
ENSHGLG00100016535	VARS2	86	48.288	ENSGAFG00000004737	vars2	92	48.170	Gambusia_affinis
ENSHGLG00100016535	VARS2	92	53.854	ENSGACG00000001464	vars2	99	53.753	Gasterosteus_aculeatus
ENSHGLG00100016535	VARS2	91	60.484	ENSGAGG00000011652	VARS2	99	60.383	Gopherus_agassizii
ENSHGLG00100016535	VARS2	99	83.600	ENSGGOG00000014587	VARS2	99	83.600	Gorilla_gorilla
ENSHGLG00100016535	VARS2	90	52.187	ENSHBUG00000002448	vars2	100	49.252	Haplochromis_burtoni
ENSHGLG00100016535	VARS2	100	99.812	ENSHGLG00000012886	VARS2	96	99.812	Heterocephalus_glaber_female
ENSHGLG00100016535	VARS2	69	48.262	ENSHCOG00000017907	vars2	94	49.859	Hippocampus_comes
ENSHGLG00100016535	VARS2	93	53.300	ENSIPUG00000015573	Vars2	97	52.079	Ictalurus_punctatus
ENSHGLG00100016535	VARS2	99	83.962	ENSSTOG00000009924	VARS2	99	83.962	Ictidomys_tridecemlineatus
ENSHGLG00100016535	VARS2	99	81.664	ENSJJAG00000011144	Vars2	99	81.664	Jaculus_jaculus
ENSHGLG00100016535	VARS2	93	52.404	ENSKMAG00000001393	vars2	99	50.460	Kryptolebias_marmoratus
ENSHGLG00100016535	VARS2	89	53.586	ENSLBEG00000011949	vars2	96	51.098	Labrus_bergylta
ENSHGLG00100016535	VARS2	52	63.604	ENSLBEG00000005480	-	81	63.063	Labrus_bergylta
ENSHGLG00100016535	VARS2	95	51.942	ENSLACG00000001576	-	99	52.136	Latimeria_chalumnae
ENSHGLG00100016535	VARS2	99	82.498	ENSLAFG00000015183	VARS2	99	82.498	Loxodonta_africana
ENSHGLG00100016535	VARS2	99	83.600	ENSMFAG00000042367	VARS2	99	83.600	Macaca_fascicularis
ENSHGLG00100016535	VARS2	99	83.600	ENSMMUG00000018609	VARS2	99	83.600	Macaca_mulatta
ENSHGLG00100016535	VARS2	99	83.695	ENSMNEG00000043163	VARS2	99	83.695	Macaca_nemestrina
ENSHGLG00100016535	VARS2	99	84.354	ENSMLEG00000041728	VARS2	97	84.354	Mandrillus_leucophaeus
ENSHGLG00100016535	VARS2	96	49.904	ENSMAMG00000020339	vars2	97	49.716	Mastacembelus_armatus
ENSHGLG00100016535	VARS2	98	51.072	ENSMZEG00005017669	vars2	99	50.979	Maylandia_zebra
ENSHGLG00100016535	VARS2	99	81.509	ENSMAUG00000018946	Vars2	99	81.509	Mesocricetus_auratus
ENSHGLG00100016535	VARS2	84	84.434	ENSMICG00000005365	VARS2	100	84.434	Microcebus_murinus
ENSHGLG00100016535	VARS2	95	82.134	ENSMOCG00000014607	Vars2	99	82.134	Microtus_ochrogaster
ENSHGLG00100016535	VARS2	91	52.227	ENSMMOG00000012122	vars2	97	50.431	Mola_mola
ENSHGLG00100016535	VARS2	99	72.599	ENSMODG00000015848	VARS2	99	72.599	Monodelphis_domestica
ENSHGLG00100016535	VARS2	93	52.100	ENSMALG00000009217	vars2	98	52.000	Monopterus_albus
ENSHGLG00100016535	VARS2	99	81.073	MGP_CAROLIEiJ_G0021529	Vars2	99	81.073	Mus_caroli
ENSHGLG00100016535	VARS2	99	81.262	ENSMUSG00000038838	Vars2	99	81.262	Mus_musculus
ENSHGLG00100016535	VARS2	99	81.544	MGP_PahariEiJ_G0020523	Vars2	99	81.544	Mus_pahari
ENSHGLG00100016535	VARS2	99	81.262	MGP_SPRETEiJ_G0022436	Vars2	99	81.262	Mus_spretus
ENSHGLG00100016535	VARS2	99	81.827	ENSMPUG00000011643	VARS2	99	81.827	Mustela_putorius_furo
ENSHGLG00100016535	VARS2	99	80.037	ENSMLUG00000002356	VARS2	97	80.037	Myotis_lucifugus
ENSHGLG00100016535	VARS2	98	75.621	ENSNGAG00000020607	Vars2	99	75.449	Nannospalax_galili
ENSHGLG00100016535	VARS2	61	49.587	ENSNBRG00000001624	vars2	59	51.515	Neolamprologus_brichardi
ENSHGLG00100016535	VARS2	99	79.793	ENSNLEG00000005625	VARS2	97	79.793	Nomascus_leucogenys
ENSHGLG00100016535	VARS2	79	72.712	ENSMEUG00000014475	VARS2	90	72.712	Notamacropus_eugenii
ENSHGLG00100016535	VARS2	90	78.855	ENSOPRG00000000682	VARS2	90	78.855	Ochotona_princeps
ENSHGLG00100016535	VARS2	99	83.616	ENSODEG00000017965	VARS2	99	83.616	Octodon_degus
ENSHGLG00100016535	VARS2	65	58.680	ENSONIG00000004734	vars2	72	58.680	Oreochromis_niloticus
ENSHGLG00100016535	VARS2	82	61.239	ENSOANG00000000398	-	99	60.550	Ornithorhynchus_anatinus
ENSHGLG00100016535	VARS2	99	77.829	ENSOCUG00000021496	VARS2	64	77.974	Oryctolagus_cuniculus
ENSHGLG00100016535	VARS2	93	52.051	ENSORLG00000010632	vars2	96	51.524	Oryzias_latipes
ENSHGLG00100016535	VARS2	94	52.089	ENSORLG00020018584	vars2	96	51.675	Oryzias_latipes_hni
ENSHGLG00100016535	VARS2	94	51.992	ENSORLG00015010408	vars2	96	51.478	Oryzias_latipes_hsok
ENSHGLG00100016535	VARS2	91	53.213	ENSOMEG00000008360	vars2	95	52.027	Oryzias_melastigma
ENSHGLG00100016535	VARS2	99	82.032	ENSOGAG00000006087	VARS2	97	82.032	Otolemur_garnettii
ENSHGLG00100016535	VARS2	99	82.102	ENSOARG00000010844	VARS2	98	82.015	Ovis_aries
ENSHGLG00100016535	VARS2	99	83.506	ENSPPAG00000041141	VARS2	99	83.506	Pan_paniscus
ENSHGLG00100016535	VARS2	99	81.356	ENSPPRG00000006751	VARS2	97	81.356	Panthera_pardus
ENSHGLG00100016535	VARS2	99	81.262	ENSPTIG00000017799	VARS2	98	82.613	Panthera_tigris_altaica
ENSHGLG00100016535	VARS2	99	83.506	ENSPTRG00000034497	VARS2	99	83.506	Pan_troglodytes
ENSHGLG00100016535	VARS2	99	84.260	ENSPANG00000018481	VARS2	100	84.139	Papio_anubis
ENSHGLG00100016535	VARS2	95	54.795	ENSPKIG00000011372	vars2	96	54.396	Paramormyrops_kingsleyae
ENSHGLG00100016535	VARS2	59	67.087	ENSPSIG00000006206	VARS2	92	66.667	Pelodiscus_sinensis
ENSHGLG00100016535	VARS2	97	52.154	ENSPMGG00000000465	vars2	98	51.970	Periophthalmus_magnuspinnatus
ENSHGLG00100016535	VARS2	99	80.925	ENSPEMG00000014691	Vars2	99	80.925	Peromyscus_maniculatus_bairdii
ENSHGLG00100016535	VARS2	99	74.221	ENSPCIG00000015040	VARS2	99	74.221	Phascolarctos_cinereus
ENSHGLG00100016535	VARS2	93	51.375	ENSPFOG00000017616	vars2	96	50.188	Poecilia_formosa
ENSHGLG00100016535	VARS2	93	50.930	ENSPLAG00000019778	vars2	98	49.346	Poecilia_latipinna
ENSHGLG00100016535	VARS2	93	51.028	ENSPMEG00000011123	vars2	98	49.439	Poecilia_mexicana
ENSHGLG00100016535	VARS2	89	46.901	ENSPREG00000014998	vars2	95	45.544	Poecilia_reticulata
ENSHGLG00100016535	VARS2	99	83.789	ENSPPYG00000016424	VARS2	99	83.789	Pongo_abelii
ENSHGLG00100016535	VARS2	84	78.443	ENSPCAG00000006946	VARS2	84	78.443	Procavia_capensis
ENSHGLG00100016535	VARS2	99	82.519	ENSPCOG00000014839	VARS2	97	82.519	Propithecus_coquereli
ENSHGLG00100016535	VARS2	99	81.073	ENSPVAG00000004197	VARS2	99	81.073	Pteropus_vampyrus
ENSHGLG00100016535	VARS2	82	60.326	ENSPNYG00000010314	vars2	97	60.326	Pundamilia_nyererei
ENSHGLG00100016535	VARS2	94	53.578	ENSPNAG00000026793	vars2	96	52.991	Pygocentrus_nattereri
ENSHGLG00100016535	VARS2	99	81.168	ENSRNOG00000000833	Vars2	99	81.168	Rattus_norvegicus
ENSHGLG00100016535	VARS2	99	83.977	ENSRBIG00000032725	VARS2	99	83.977	Rhinopithecus_bieti
ENSHGLG00100016535	VARS2	99	83.883	ENSRROG00000043847	VARS2	99	83.883	Rhinopithecus_roxellana
ENSHGLG00100016535	VARS2	99	81.717	ENSSBOG00000033240	VARS2	97	81.717	Saimiri_boliviensis_boliviensis
ENSHGLG00100016535	VARS2	99	73.182	ENSSHAG00000009307	VARS2	100	73.182	Sarcophilus_harrisii
ENSHGLG00100016535	VARS2	96	53.194	ENSSFOG00015016187	vars2	98	52.247	Scleropages_formosus
ENSHGLG00100016535	VARS2	93	52.819	ENSSMAG00000020842	vars2	97	51.958	Scophthalmus_maximus
ENSHGLG00100016535	VARS2	93	51.660	ENSSDUG00000011598	vars2	97	50.665	Seriola_dumerili
ENSHGLG00100016535	VARS2	91	52.308	ENSSLDG00000015492	vars2	97	50.000	Seriola_lalandi_dorsalis
ENSHGLG00100016535	VARS2	58	82.482	ENSSARG00000003786	-	69	82.482	Sorex_araneus
ENSHGLG00100016535	VARS2	88	58.555	ENSSPUG00000014700	VARS2	94	58.448	Sphenodon_punctatus
ENSHGLG00100016535	VARS2	92	50.100	ENSSPAG00000004654	vars2	98	48.580	Stegastes_partitus
ENSHGLG00100016535	VARS2	99	82.957	ENSSSCG00000001384	VARS2	99	82.957	Sus_scrofa
ENSHGLG00100016535	VARS2	94	51.976	ENSTRUG00000005264	vars2	99	50.843	Takifugu_rubripes
ENSHGLG00100016535	VARS2	96	51.691	ENSTNIG00000005916	vars2	99	51.072	Tetraodon_nigroviridis
ENSHGLG00100016535	VARS2	54	85.075	ENSTBEG00000007976	-	53	85.075	Tupaia_belangeri
ENSHGLG00100016535	VARS2	94	80.804	ENSTTRG00000012243	VARS2	93	80.804	Tursiops_truncatus
ENSHGLG00100016535	VARS2	99	81.373	ENSUAMG00000026124	VARS2	99	83.931	Ursus_americanus
ENSHGLG00100016535	VARS2	99	82.203	ENSUMAG00000019894	VARS2	99	82.203	Ursus_maritimus
ENSHGLG00100016535	VARS2	99	81.109	ENSVVUG00000010754	VARS2	95	81.109	Vulpes_vulpes
ENSHGLG00100016535	VARS2	89	54.262	ENSXETG00000003036	vars2	99	54.158	Xenopus_tropicalis
ENSHGLG00100016535	VARS2	91	52.761	ENSXCOG00000003455	vars2	98	50.918	Xiphophorus_couchianus
ENSHGLG00100016535	VARS2	93	50.733	ENSXMAG00000013523	vars2	98	49.440	Xiphophorus_maculatus