EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00100016600 (Gene tree)
Gene ID: -
Gene Symbol: PRPF6
Alias: ANT-1|C20orf14|Prp6|RP60|SNRNP102|TOM|U5-102K|bB152O15.1|hPrp6
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 55993 bases
Position: chrJH173809.1:336749-392741
Accession: 101704761
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100022572	PRP1_N	PF06424.12	3.5e-47	1	1
ENSHGLP00100022571	PRP1_N	PF06424.12	3.6e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100022806	PRPF6-201	2754	XM_004841124	ENSHGLP00100022571	917 (aa)	XP_004841181	-
ENSHGLT00100022807	PRPF6-202	2664	-	ENSHGLP00100022572	887 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100016600's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100016600's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100016600	PRPF6	100	97.819	ENSG00000101161	PRPF6	97	97.819	Homo_sapiens
ENSHGLG00100016600	PRPF6	100	92.912	ENSAPOG00000010395	prpf6	93	93.348	Acanthochromis_polyacanthus
ENSHGLG00100016600	PRPF6	100	98.691	ENSAMEG00000001916	PRPF6	97	98.691	Ailuropoda_melanoleuca
ENSHGLG00100016600	PRPF6	100	92.694	ENSACIG00000019862	prpf6	93	93.130	Amphilophus_citrinellus
ENSHGLG00100016600	PRPF6	100	92.912	ENSAOCG00000012988	prpf6	93	93.348	Amphiprion_ocellaris
ENSHGLG00100016600	PRPF6	100	86.041	ENSAPEG00000008301	prpf6	97	86.587	Amphiprion_percula
ENSHGLG00100016600	PRPF6	100	92.366	ENSATEG00000005581	prpf6	93	92.803	Anabas_testudineus
ENSHGLG00100016600	PRPF6	100	98.037	ENSACAG00000006464	PRPF6	93	98.037	Anolis_carolinensis
ENSHGLG00100016600	PRPF6	100	97.928	ENSANAG00000012661	PRPF6	97	98.667	Aotus_nancymaae
ENSHGLG00100016600	PRPF6	100	92.585	ENSACLG00000025875	prpf6	93	93.021	Astatotilapia_calliptera
ENSHGLG00100016600	PRPF6	100	92.912	ENSAMXG00000001929	prpf6	93	93.348	Astyanax_mexicanus
ENSHGLG00100016600	PRPF6	100	98.146	ENSBTAG00000011656	PRPF6	97	98.146	Bos_taurus
ENSHGLG00100016600	PRPF6	100	97.928	ENSCJAG00000010616	PRPF6	97	97.928	Callithrix_jacchus
ENSHGLG00100016600	PRPF6	100	98.691	ENSCAFG00000013165	PRPF6	97	98.691	Canis_familiaris
ENSHGLG00100016600	PRPF6	100	98.691	ENSCAFG00020002050	PRPF6	97	98.691	Canis_lupus_dingo
ENSHGLG00100016600	PRPF6	100	98.146	ENSCHIG00000018187	PRPF6	97	98.146	Capra_hircus
ENSHGLG00100016600	PRPF6	100	98.582	ENSTSYG00000007814	PRPF6	97	98.582	Carlito_syrichta
ENSHGLG00100016600	PRPF6	100	98.473	ENSCAPG00000015077	PRPF6	100	98.473	Cavia_aperea
ENSHGLG00100016600	PRPF6	100	99.782	ENSCPOG00000007518	PRPF6	97	99.782	Cavia_porcellus
ENSHGLG00100016600	PRPF6	100	94.656	ENSCCAG00000024564	PRPF6	97	94.656	Cebus_capucinus
ENSHGLG00100016600	PRPF6	100	97.710	ENSCATG00000037473	PRPF6	97	97.710	Cercocebus_atys
ENSHGLG00100016600	PRPF6	100	95.638	ENSCLAG00000003854	PRPF6	97	95.638	Chinchilla_lanigera
ENSHGLG00100016600	PRPF6	100	92.524	ENSCSAG00000016742	PRPF6	97	92.524	Chlorocebus_sabaeus
ENSHGLG00100016600	PRPF6	87	81.138	ENSCHOG00000003315	-	100	81.138	Choloepus_hoffmanni
ENSHGLG00100016600	PRPF6	100	98.255	ENSCPBG00000013964	PRPF6	94	98.255	Chrysemys_picta_bellii
ENSHGLG00100016600	PRPF6	100	73.377	ENSCING00000008817	-	97	73.377	Ciona_intestinalis
ENSHGLG00100016600	PRPF6	100	97.928	ENSCANG00000038230	PRPF6	97	97.928	Colobus_angolensis_palliatus
ENSHGLG00100016600	PRPF6	100	99.564	ENSCGRG00001022666	Prpf6	97	99.564	Cricetulus_griseus_chok1gshd
ENSHGLG00100016600	PRPF6	100	87.023	ENSCSEG00000018561	prpf6	97	87.459	Cynoglossus_semilaevis
ENSHGLG00100016600	PRPF6	100	92.803	ENSCVAG00000010550	prpf6	93	93.239	Cyprinodon_variegatus
ENSHGLG00100016600	PRPF6	100	92.585	ENSDARG00000091367	prpf6	96	93.021	Danio_rerio
ENSHGLG00100016600	PRPF6	100	97.492	ENSDNOG00000040544	PRPF6	97	97.492	Dasypus_novemcinctus
ENSHGLG00100016600	PRPF6	93	98.364	ENSDORG00000005406	Prpf6	100	98.364	Dipodomys_ordii
ENSHGLG00100016600	PRPF6	99	71.965	FBgn0036828	CG6841	96	72.277	Drosophila_melanogaster
ENSHGLG00100016600	PRPF6	84	100.000	ENSETEG00000004447	PRPF6	81	100.000	Echinops_telfairi
ENSHGLG00100016600	PRPF6	100	87.065	ENSEBUG00000008835	prpf6	97	87.065	Eptatretus_burgeri
ENSHGLG00100016600	PRPF6	100	98.364	ENSEASG00005023115	PRPF6	97	98.364	Equus_asinus_asinus
ENSHGLG00100016600	PRPF6	100	94.002	ENSECAG00000013983	PRPF6	97	94.002	Equus_caballus
ENSHGLG00100016600	PRPF6	90	95.612	ENSEEUG00000000180	PRPF6	79	95.612	Erinaceus_europaeus
ENSHGLG00100016600	PRPF6	100	91.494	ENSELUG00000001945	prpf6	91	91.494	Esox_lucius
ENSHGLG00100016600	PRPF6	100	98.582	ENSFCAG00000001183	PRPF6	97	98.582	Felis_catus
ENSHGLG00100016600	PRPF6	100	90.840	ENSFALG00000006046	-	94	90.840	Ficedula_albicollis
ENSHGLG00100016600	PRPF6	100	98.146	ENSFALG00000010326	-	95	98.146	Ficedula_albicollis
ENSHGLG00100016600	PRPF6	100	99.782	ENSFDAG00000006451	PRPF6	100	99.773	Fukomys_damarensis
ENSHGLG00100016600	PRPF6	100	93.566	ENSFHEG00000000560	prpf6	94	93.566	Fundulus_heteroclitus
ENSHGLG00100016600	PRPF6	100	89.262	ENSGMOG00000015622	prpf6	97	89.262	Gadus_morhua
ENSHGLG00100016600	PRPF6	100	98.037	ENSGALG00000006001	PRPF6	97	98.037	Gallus_gallus
ENSHGLG00100016600	PRPF6	100	88.332	ENSGAFG00000021109	prpf6	93	88.768	Gambusia_affinis
ENSHGLG00100016600	PRPF6	100	91.385	ENSGACG00000002576	prpf6	97	91.385	Gasterosteus_aculeatus
ENSHGLG00100016600	PRPF6	100	98.146	ENSGAGG00000008653	PRPF6	94	98.146	Gopherus_agassizii
ENSHGLG00100016600	PRPF6	100	97.819	ENSGGOG00000016876	PRPF6	96	100.000	Gorilla_gorilla
ENSHGLG00100016600	PRPF6	100	92.585	ENSHBUG00000004496	prpf6	93	93.021	Haplochromis_burtoni
ENSHGLG00100016600	PRPF6	100	100.000	ENSHGLG00000009222	PRPF6	97	100.000	Heterocephalus_glaber_female
ENSHGLG00100016600	PRPF6	100	91.385	ENSHCOG00000011513	prpf6	93	91.821	Hippocampus_comes
ENSHGLG00100016600	PRPF6	100	93.457	ENSIPUG00000004912	prpf6	94	93.457	Ictalurus_punctatus
ENSHGLG00100016600	PRPF6	100	96.732	ENSSTOG00000002922	PRPF6	97	96.732	Ictidomys_tridecemlineatus
ENSHGLG00100016600	PRPF6	100	99.673	ENSJJAG00000000836	Prpf6	97	99.673	Jaculus_jaculus
ENSHGLG00100016600	PRPF6	100	92.366	ENSKMAG00000017800	prpf6	93	92.803	Kryptolebias_marmoratus
ENSHGLG00100016600	PRPF6	100	92.039	ENSLBEG00000012582	prpf6	93	92.039	Labrus_bergylta
ENSHGLG00100016600	PRPF6	100	94.656	ENSLOCG00000004827	prpf6	92	95.093	Lepisosteus_oculatus
ENSHGLG00100016600	PRPF6	100	97.601	ENSLAFG00000005272	PRPF6	97	97.601	Loxodonta_africana
ENSHGLG00100016600	PRPF6	100	97.928	ENSMFAG00000037542	PRPF6	96	100.000	Macaca_fascicularis
ENSHGLG00100016600	PRPF6	94	99.653	ENSMMUG00000015558	PRPF6	98	99.653	Macaca_mulatta
ENSHGLG00100016600	PRPF6	100	83.043	ENSMNEG00000045555	PRPF6	97	83.043	Macaca_nemestrina
ENSHGLG00100016600	PRPF6	100	92.694	ENSMAMG00000010718	prpf6	94	93.021	Mastacembelus_armatus
ENSHGLG00100016600	PRPF6	100	92.048	ENSMZEG00005015261	-	97	92.484	Maylandia_zebra
ENSHGLG00100016600	PRPF6	96	92.177	ENSMZEG00005026539	prpf6	100	92.630	Maylandia_zebra
ENSHGLG00100016600	PRPF6	100	98.146	ENSMGAG00000006634	PRPF6	100	98.146	Meleagris_gallopavo
ENSHGLG00100016600	PRPF6	100	99.455	ENSMAUG00000013969	Prpf6	97	99.455	Mesocricetus_auratus
ENSHGLG00100016600	PRPF6	90	98.175	ENSMICG00000017793	PRPF6	99	98.175	Microcebus_murinus
ENSHGLG00100016600	PRPF6	100	99.346	ENSMOCG00000001701	Prpf6	97	99.346	Microtus_ochrogaster
ENSHGLG00100016600	PRPF6	100	91.712	ENSMMOG00000020419	prpf6	97	92.148	Mola_mola
ENSHGLG00100016600	PRPF6	99	98.856	ENSMODG00000017051	PRPF6	96	98.856	Monodelphis_domestica
ENSHGLG00100016600	PRPF6	100	92.803	ENSMALG00000000089	prpf6	98	92.803	Monopterus_albus
ENSHGLG00100016600	PRPF6	100	92.694	MGP_CAROLIEiJ_G0024814	Prpf6	100	100.000	Mus_caroli
ENSHGLG00100016600	PRPF6	100	99.455	ENSMUSG00000002455	Prpf6	100	100.000	Mus_musculus
ENSHGLG00100016600	PRPF6	100	99.455	MGP_PahariEiJ_G0026262	Prpf6	100	100.000	Mus_pahari
ENSHGLG00100016600	PRPF6	100	99.455	MGP_SPRETEiJ_G0025741	Prpf6	100	100.000	Mus_spretus
ENSHGLG00100016600	PRPF6	94	97.974	ENSMPUG00000008673	PRPF6	99	97.974	Mustela_putorius_furo
ENSHGLG00100016600	PRPF6	100	99.673	ENSNGAG00000003365	Prpf6	97	99.673	Nannospalax_galili
ENSHGLG00100016600	PRPF6	100	92.694	ENSNBRG00000015025	prpf6	93	93.130	Neolamprologus_brichardi
ENSHGLG00100016600	PRPF6	100	97.819	ENSNLEG00000010208	PRPF6	97	97.819	Nomascus_leucogenys
ENSHGLG00100016600	PRPF6	100	88.933	ENSMEUG00000009824	-	87	88.933	Notamacropus_eugenii
ENSHGLG00100016600	PRPF6	100	93.348	ENSODEG00000004841	PRPF6	97	93.348	Octodon_degus
ENSHGLG00100016600	PRPF6	100	92.585	ENSONIG00000017406	prpf6	93	93.021	Oreochromis_niloticus
ENSHGLG00100016600	PRPF6	100	98.473	ENSOANG00000004920	PRPF6	97	98.473	Ornithorhynchus_anatinus
ENSHGLG00100016600	PRPF6	100	97.492	ENSOCUG00000014151	PRPF6	98	97.492	Oryctolagus_cuniculus
ENSHGLG00100016600	PRPF6	100	92.366	ENSORLG00000009592	prpf6	93	92.366	Oryzias_latipes
ENSHGLG00100016600	PRPF6	100	92.475	ENSORLG00020001458	prpf6	93	92.475	Oryzias_latipes_hni
ENSHGLG00100016600	PRPF6	100	92.475	ENSORLG00015018762	prpf6	93	92.475	Oryzias_latipes_hsok
ENSHGLG00100016600	PRPF6	100	92.366	ENSOMEG00000012174	prpf6	93	92.803	Oryzias_melastigma
ENSHGLG00100016600	PRPF6	100	91.068	ENSOGAG00000007573	PRPF6	97	91.068	Otolemur_garnettii
ENSHGLG00100016600	PRPF6	100	98.146	ENSOARG00000008776	PRPF6	97	98.146	Ovis_aries
ENSHGLG00100016600	PRPF6	100	97.819	ENSPPAG00000008686	PRPF6	96	100.000	Pan_paniscus
ENSHGLG00100016600	PRPF6	100	98.473	ENSPPRG00000008497	PRPF6	97	98.473	Panthera_pardus
ENSHGLG00100016600	PRPF6	100	98.473	ENSPTIG00000011184	PRPF6	97	98.473	Panthera_tigris_altaica
ENSHGLG00100016600	PRPF6	100	97.819	ENSPTRG00000013765	PRPF6	96	100.000	Pan_troglodytes
ENSHGLG00100016600	PRPF6	100	97.383	ENSPANG00000024135	PRPF6	97	97.383	Papio_anubis
ENSHGLG00100016600	PRPF6	100	94.220	ENSPKIG00000005627	prpf6	96	94.656	Paramormyrops_kingsleyae
ENSHGLG00100016600	PRPF6	96	98.413	ENSPSIG00000007717	PRPF6	100	98.413	Pelodiscus_sinensis
ENSHGLG00100016600	PRPF6	100	90.196	ENSPMGG00000008925	prpf6	94	90.414	Periophthalmus_magnuspinnatus
ENSHGLG00100016600	PRPF6	100	99.346	ENSPEMG00000016036	Prpf6	97	99.346	Peromyscus_maniculatus_bairdii
ENSHGLG00100016600	PRPF6	100	88.139	ENSPMAG00000006144	prpf6	97	88.139	Petromyzon_marinus
ENSHGLG00100016600	PRPF6	100	98.582	ENSPCIG00000017909	PRPF6	97	98.582	Phascolarctos_cinereus
ENSHGLG00100016600	PRPF6	100	93.130	ENSPFOG00000006431	prpf6	93	93.566	Poecilia_formosa
ENSHGLG00100016600	PRPF6	100	93.021	ENSPLAG00000005974	prpf6	93	93.457	Poecilia_latipinna
ENSHGLG00100016600	PRPF6	100	93.239	ENSPMEG00000009977	prpf6	93	93.675	Poecilia_mexicana
ENSHGLG00100016600	PRPF6	100	93.130	ENSPREG00000017993	prpf6	89	93.566	Poecilia_reticulata
ENSHGLG00100016600	PRPF6	100	97.274	ENSPPYG00000011256	PRPF6	97	97.274	Pongo_abelii
ENSHGLG00100016600	PRPF6	97	99.673	ENSPCAG00000006536	PRPF6	88	99.673	Procavia_capensis
ENSHGLG00100016600	PRPF6	100	98.037	ENSPCOG00000016881	PRPF6	97	98.037	Propithecus_coquereli
ENSHGLG00100016600	PRPF6	100	92.039	ENSPVAG00000014316	PRPF6	97	92.039	Pteropus_vampyrus
ENSHGLG00100016600	PRPF6	100	77.280	ENSPNYG00000001939	prpf6	93	77.280	Pundamilia_nyererei
ENSHGLG00100016600	PRPF6	100	93.348	ENSPNAG00000015606	prpf6	93	93.784	Pygocentrus_nattereri
ENSHGLG00100016600	PRPF6	100	99.455	ENSRNOG00000051498	Prpf6	97	99.455	Rattus_norvegicus
ENSHGLG00100016600	PRPF6	100	97.928	ENSRBIG00000043613	PRPF6	98	98.270	Rhinopithecus_bieti
ENSHGLG00100016600	PRPF6	100	94.680	ENSRROG00000040969	PRPF6	98	98.270	Rhinopithecus_roxellana
ENSHGLG00100016600	PRPF6	94	93.772	ENSSBOG00000020632	PRPF6	93	93.772	Saimiri_boliviensis_boliviensis
ENSHGLG00100016600	PRPF6	100	98.582	ENSSHAG00000016810	PRPF6	97	98.582	Sarcophilus_harrisii
ENSHGLG00100016600	PRPF6	100	94.438	ENSSFOG00015020859	prpf6	98	94.875	Scleropages_formosus
ENSHGLG00100016600	PRPF6	100	91.930	ENSSMAG00000008112	prpf6	93	91.930	Scophthalmus_maximus
ENSHGLG00100016600	PRPF6	100	92.585	ENSSDUG00000016142	prpf6	93	93.021	Seriola_dumerili
ENSHGLG00100016600	PRPF6	100	92.585	ENSSLDG00000025283	prpf6	97	89.422	Seriola_lalandi_dorsalis
ENSHGLG00100016600	PRPF6	96	96.825	ENSSPUG00000018260	PRPF6	100	96.825	Sphenodon_punctatus
ENSHGLG00100016600	PRPF6	100	92.585	ENSSPAG00000015850	prpf6	93	93.021	Stegastes_partitus
ENSHGLG00100016600	PRPF6	100	98.255	ENSSSCG00000029119	PRPF6	100	98.186	Sus_scrofa
ENSHGLG00100016600	PRPF6	100	98.255	ENSTGUG00000007221	PRPF6	97	98.255	Taeniopygia_guttata
ENSHGLG00100016600	PRPF6	100	91.494	ENSTRUG00000002920	prpf6	93	91.930	Takifugu_rubripes
ENSHGLG00100016600	PRPF6	100	85.033	ENSTNIG00000017873	prpf6	97	85.466	Tetraodon_nigroviridis
ENSHGLG00100016600	PRPF6	91	98.895	ENSTBEG00000005348	PRPF6	85	98.895	Tupaia_belangeri
ENSHGLG00100016600	PRPF6	100	97.710	ENSTTRG00000013068	PRPF6	97	97.710	Tursiops_truncatus
ENSHGLG00100016600	PRPF6	100	97.274	ENSUMAG00000021631	PRPF6	98	97.274	Ursus_maritimus
ENSHGLG00100016600	PRPF6	100	98.691	ENSVVUG00000014948	PRPF6	97	98.691	Vulpes_vulpes
ENSHGLG00100016600	PRPF6	100	95.638	ENSXETG00000012054	prpf6	94	96.074	Xenopus_tropicalis
ENSHGLG00100016600	PRPF6	100	93.239	ENSXCOG00000008082	prpf6	93	93.675	Xiphophorus_couchianus
ENSHGLG00100016600	PRPF6	100	93.239	ENSXMAG00000015581	prpf6	93	93.675	Xiphophorus_maculatus