EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00100016879 (Gene tree)
Gene ID: -
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 30877 bases
Position: chrJH169014.1:1781019-1811895
Accession: 101713471
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100022948	POP1	PF06978.11	1.9e-36	1	2
ENSHGLP00100022948	POP1	PF06978.11	1.9e-36	2	2
ENSHGLP00100022948	POPLD	PF08170.12	5.3e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100023188	-	4958	-	ENSHGLP00100022948	1023 (aa)	XP_004850209	G5B8Y5

Gene Model

Click here to download ENSHGLG00100016879's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100016879's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100016879	POP1	100	82.227	ENSG00000104356	POP1	100	87.432	Homo_sapiens
ENSHGLG00100016879	POP1	100	48.057	ENSAPOG00000008198	pop1	100	47.962	Acanthochromis_polyacanthus
ENSHGLG00100016879	POP1	100	77.476	ENSAMEG00000000556	POP1	100	77.476	Ailuropoda_melanoleuca
ENSHGLG00100016879	POP1	90	48.993	ENSACIG00000004169	POP1	100	45.774	Amphilophus_citrinellus
ENSHGLG00100016879	POP1	100	46.854	ENSAOCG00000010991	pop1	100	47.348	Amphiprion_ocellaris
ENSHGLG00100016879	POP1	91	46.209	ENSAPEG00000007607	pop1	94	47.619	Amphiprion_percula
ENSHGLG00100016879	POP1	100	46.103	ENSATEG00000024814	POP1	100	46.321	Anabas_testudineus
ENSHGLG00100016879	POP1	92	61.117	ENSAPLG00000014418	POP1	99	60.983	Anas_platyrhynchos
ENSHGLG00100016879	POP1	100	55.169	ENSACAG00000016083	POP1	100	54.889	Anolis_carolinensis
ENSHGLG00100016879	POP1	88	85.757	ENSANAG00000026360	POP1	99	85.757	Aotus_nancymaae
ENSHGLG00100016879	POP1	100	47.583	ENSACLG00000010951	pop1	100	48.152	Astatotilapia_calliptera
ENSHGLG00100016879	POP1	100	45.438	ENSAMXG00000014483	POP1	100	45.129	Astyanax_mexicanus
ENSHGLG00100016879	POP1	100	77.246	ENSBTAG00000012596	POP1	100	77.246	Bos_taurus
ENSHGLG00100016879	POP1	100	79.688	ENSCJAG00000015567	POP1	100	79.688	Callithrix_jacchus
ENSHGLG00100016879	POP1	100	78.104	ENSCAFG00000000469	POP1	100	78.104	Canis_familiaris
ENSHGLG00100016879	POP1	100	78.809	ENSCAFG00020026765	POP1	100	78.809	Canis_lupus_dingo
ENSHGLG00100016879	POP1	100	77.171	ENSCHIG00000017066	POP1	100	77.268	Capra_hircus
ENSHGLG00100016879	POP1	100	80.664	ENSTSYG00000003097	POP1	100	80.664	Carlito_syrichta
ENSHGLG00100016879	POP1	100	82.216	ENSCAPG00000007251	POP1	100	82.216	Cavia_aperea
ENSHGLG00100016879	POP1	100	85.239	ENSCPOG00000002901	POP1	100	85.239	Cavia_porcellus
ENSHGLG00100016879	POP1	100	79.883	ENSCCAG00000018939	POP1	100	79.883	Cebus_capucinus
ENSHGLG00100016879	POP1	100	81.543	ENSCATG00000040916	POP1	100	81.543	Cercocebus_atys
ENSHGLG00100016879	POP1	100	87.195	ENSCLAG00000007208	POP1	97	87.195	Chinchilla_lanigera
ENSHGLG00100016879	POP1	90	81.779	ENSCSAG00000012340	POP1	98	81.668	Chlorocebus_sabaeus
ENSHGLG00100016879	POP1	95	75.615	ENSCHOG00000011432	POP1	100	75.615	Choloepus_hoffmanni
ENSHGLG00100016879	POP1	100	63.813	ENSCPBG00000006373	POP1	100	63.531	Chrysemys_picta_bellii
ENSHGLG00100016879	POP1	82	38.911	ENSCING00000008323	-	89	38.911	Ciona_intestinalis
ENSHGLG00100016879	POP1	100	81.348	ENSCANG00000001647	POP1	100	81.348	Colobus_angolensis_palliatus
ENSHGLG00100016879	POP1	100	75.781	ENSCGRG00001017308	Pop1	100	75.781	Cricetulus_griseus_chok1gshd
ENSHGLG00100016879	POP1	100	70.508	ENSCGRG00000010824	Pop1	100	70.508	Cricetulus_griseus_crigri
ENSHGLG00100016879	POP1	100	45.024	ENSCSEG00000008737	POP1	100	45.687	Cynoglossus_semilaevis
ENSHGLG00100016879	POP1	100	46.367	ENSCVAG00000022248	pop1	100	45.885	Cyprinodon_variegatus
ENSHGLG00100016879	POP1	100	73.516	ENSDNOG00000019974	POP1	100	73.516	Dasypus_novemcinctus
ENSHGLG00100016879	POP1	100	71.735	ENSDORG00000015384	Pop1	100	71.735	Dipodomys_ordii
ENSHGLG00100016879	POP1	61	33.175	FBgn0026702	l(1)G0045	71	33.282	Drosophila_melanogaster
ENSHGLG00100016879	POP1	89	67.895	ENSETEG00000007839	POP1	88	67.895	Echinops_telfairi
ENSHGLG00100016879	POP1	100	79.785	ENSEASG00005003189	POP1	98	79.785	Equus_asinus_asinus
ENSHGLG00100016879	POP1	100	79.590	ENSECAG00000024236	POP1	100	79.590	Equus_caballus
ENSHGLG00100016879	POP1	67	69.824	ENSEEUG00000003050	-	70	69.824	Erinaceus_europaeus
ENSHGLG00100016879	POP1	100	46.080	ENSELUG00000003526	pop1	100	46.648	Esox_lucius
ENSHGLG00100016879	POP1	100	80.176	ENSFCAG00000002168	POP1	100	80.176	Felis_catus
ENSHGLG00100016879	POP1	100	57.915	ENSFALG00000005711	POP1	100	57.915	Ficedula_albicollis
ENSHGLG00100016879	POP1	100	91.202	ENSFDAG00000017068	POP1	100	91.202	Fukomys_damarensis
ENSHGLG00100016879	POP1	100	46.183	ENSFHEG00000019518	pop1	100	46.183	Fundulus_heteroclitus
ENSHGLG00100016879	POP1	95	45.210	ENSGMOG00000000659	POP1	100	45.309	Gadus_morhua
ENSHGLG00100016879	POP1	100	47.031	ENSGAFG00000019770	POP1	100	47.031	Gambusia_affinis
ENSHGLG00100016879	POP1	100	46.520	ENSGACG00000003499	pop1	100	46.425	Gasterosteus_aculeatus
ENSHGLG00100016879	POP1	100	63.259	ENSGAGG00000011737	POP1	98	63.663	Gopherus_agassizii
ENSHGLG00100016879	POP1	100	82.031	ENSGGOG00000003176	POP1	100	82.031	Gorilla_gorilla
ENSHGLG00100016879	POP1	100	48.201	ENSHBUG00000021583	pop1	100	48.057	Haplochromis_burtoni
ENSHGLG00100016879	POP1	100	100.000	ENSHGLG00000006029	POP1	100	100.000	Heterocephalus_glaber_female
ENSHGLG00100016879	POP1	90	48.669	ENSHCOG00000013888	pop1	95	48.439	Hippocampus_comes
ENSHGLG00100016879	POP1	92	51.822	ENSIPUG00000018336	pop1	88	62.025	Ictalurus_punctatus
ENSHGLG00100016879	POP1	100	82.307	ENSSTOG00000011455	POP1	97	82.307	Ictidomys_tridecemlineatus
ENSHGLG00100016879	POP1	100	75.562	ENSJJAG00000013325	Pop1	100	75.562	Jaculus_jaculus
ENSHGLG00100016879	POP1	100	46.425	ENSKMAG00000001346	POP1	100	46.323	Kryptolebias_marmoratus
ENSHGLG00100016879	POP1	89	48.164	ENSLBEG00000024457	POP1	93	47.784	Labrus_bergylta
ENSHGLG00100016879	POP1	93	55.075	ENSLACG00000012498	POP1	99	55.176	Latimeria_chalumnae
ENSHGLG00100016879	POP1	100	50.771	ENSLOCG00000009817	POP1	100	51.109	Lepisosteus_oculatus
ENSHGLG00100016879	POP1	100	79.086	ENSLAFG00000010770	POP1	100	79.086	Loxodonta_africana
ENSHGLG00100016879	POP1	100	81.543	ENSMFAG00000000347	POP1	100	81.543	Macaca_fascicularis
ENSHGLG00100016879	POP1	100	81.250	ENSMNEG00000036870	POP1	100	81.250	Macaca_nemestrina
ENSHGLG00100016879	POP1	100	81.543	ENSMLEG00000034986	POP1	100	81.543	Mandrillus_leucophaeus
ENSHGLG00100016879	POP1	100	46.553	ENSMAMG00000004040	pop1	100	46.837	Mastacembelus_armatus
ENSHGLG00100016879	POP1	100	48.201	ENSMZEG00005025448	pop1	100	48.057	Maylandia_zebra
ENSHGLG00100016879	POP1	100	56.534	ENSMGAG00000012167	POP1	100	56.588	Meleagris_gallopavo
ENSHGLG00100016879	POP1	100	75.657	ENSMAUG00000017537	Pop1	100	75.657	Mesocricetus_auratus
ENSHGLG00100016879	POP1	100	81.738	ENSMICG00000004361	POP1	100	81.738	Microcebus_murinus
ENSHGLG00100016879	POP1	100	75.660	ENSMOCG00000006356	Pop1	100	76.051	Microtus_ochrogaster
ENSHGLG00100016879	POP1	100	43.895	ENSMMOG00000018242	pop1	100	43.973	Mola_mola
ENSHGLG00100016879	POP1	100	65.640	ENSMODG00000006561	POP1	100	66.314	Monodelphis_domestica
ENSHGLG00100016879	POP1	92	50.964	ENSMALG00000012621	POP1	100	46.622	Monopterus_albus
ENSHGLG00100016879	POP1	100	75.464	MGP_CAROLIEiJ_G0019726	Pop1	100	75.464	Mus_caroli
ENSHGLG00100016879	POP1	100	75.855	ENSMUSG00000022325	Pop1	100	75.855	Mus_musculus
ENSHGLG00100016879	POP1	100	75.855	MGP_PahariEiJ_G0019735	Pop1	100	75.855	Mus_pahari
ENSHGLG00100016879	POP1	100	75.855	MGP_SPRETEiJ_G0020622	Pop1	100	75.855	Mus_spretus
ENSHGLG00100016879	POP1	100	78.891	ENSMPUG00000015250	POP1	100	78.891	Mustela_putorius_furo
ENSHGLG00100016879	POP1	100	73.977	ENSMLUG00000010204	POP1	100	73.977	Myotis_lucifugus
ENSHGLG00100016879	POP1	100	80.156	ENSNGAG00000001582	Pop1	100	80.156	Nannospalax_galili
ENSHGLG00100016879	POP1	89	48.397	ENSNBRG00000002356	pop1	93	47.564	Neolamprologus_brichardi
ENSHGLG00100016879	POP1	100	81.445	ENSNLEG00000002541	POP1	100	81.445	Nomascus_leucogenys
ENSHGLG00100016879	POP1	93	59.336	ENSMEUG00000003118	POP1	98	59.336	Notamacropus_eugenii
ENSHGLG00100016879	POP1	100	76.735	ENSOPRG00000007667	POP1	100	76.735	Ochotona_princeps
ENSHGLG00100016879	POP1	100	85.268	ENSODEG00000003984	POP1	100	85.268	Octodon_degus
ENSHGLG00100016879	POP1	100	48.201	ENSONIG00000016445	pop1	100	48.106	Oreochromis_niloticus
ENSHGLG00100016879	POP1	59	68.902	ENSOANG00000001278	-	94	68.902	Ornithorhynchus_anatinus
ENSHGLG00100016879	POP1	100	79.300	ENSOCUG00000017400	POP1	100	79.300	Oryctolagus_cuniculus
ENSHGLG00100016879	POP1	92	49.218	ENSORLG00000002839	pop1	100	47.217	Oryzias_latipes
ENSHGLG00100016879	POP1	90	49.097	ENSORLG00020022450	POP1	95	49.352	Oryzias_latipes_hni
ENSHGLG00100016879	POP1	92	49.009	ENSORLG00015012746	POP1	100	47.348	Oryzias_latipes_hsok
ENSHGLG00100016879	POP1	100	47.195	ENSOMEG00000006915	pop1	99	47.389	Oryzias_melastigma
ENSHGLG00100016879	POP1	100	79.590	ENSOGAG00000001466	POP1	100	79.590	Otolemur_garnettii
ENSHGLG00100016879	POP1	100	82.129	ENSPPAG00000018410	POP1	100	82.129	Pan_paniscus
ENSHGLG00100016879	POP1	100	80.293	ENSPPRG00000005002	POP1	100	80.293	Panthera_pardus
ENSHGLG00100016879	POP1	100	80.488	ENSPTIG00000016527	POP1	100	80.488	Panthera_tigris_altaica
ENSHGLG00100016879	POP1	100	82.031	ENSPTRG00000020458	POP1	100	82.031	Pan_troglodytes
ENSHGLG00100016879	POP1	100	81.641	ENSPANG00000009704	POP1	100	81.641	Papio_anubis
ENSHGLG00100016879	POP1	100	48.944	ENSPKIG00000016325	POP1	100	48.806	Paramormyrops_kingsleyae
ENSHGLG00100016879	POP1	100	62.076	ENSPSIG00000012343	POP1	100	61.896	Pelodiscus_sinensis
ENSHGLG00100016879	POP1	90	47.932	ENSPMGG00000022253	POP1	94	47.923	Periophthalmus_magnuspinnatus
ENSHGLG00100016879	POP1	99	74.138	ENSPEMG00000023633	Pop1	100	74.138	Peromyscus_maniculatus_bairdii
ENSHGLG00100016879	POP1	90	43.684	ENSPMAG00000003209	POP1	99	43.298	Petromyzon_marinus
ENSHGLG00100016879	POP1	100	65.414	ENSPCIG00000012216	POP1	100	65.514	Phascolarctos_cinereus
ENSHGLG00100016879	POP1	100	46.833	ENSPFOG00000012490	POP1	100	46.418	Poecilia_formosa
ENSHGLG00100016879	POP1	100	46.673	ENSPLAG00000004646	POP1	100	46.257	Poecilia_latipinna
ENSHGLG00100016879	POP1	100	47.076	ENSPMEG00000019592	POP1	100	46.660	Poecilia_mexicana
ENSHGLG00100016879	POP1	100	46.692	ENSPREG00000020951	POP1	100	46.500	Poecilia_reticulata
ENSHGLG00100016879	POP1	100	82.031	ENSPPYG00000018777	POP1	100	82.031	Pongo_abelii
ENSHGLG00100016879	POP1	100	72.763	ENSPCAG00000016662	POP1	100	72.763	Procavia_capensis
ENSHGLG00100016879	POP1	100	82.617	ENSPCOG00000019420	POP1	100	82.617	Propithecus_coquereli
ENSHGLG00100016879	POP1	100	79.024	ENSPVAG00000014468	POP1	100	79.024	Pteropus_vampyrus
ENSHGLG00100016879	POP1	89	49.140	ENSPNYG00000004476	pop1	94	49.140	Pundamilia_nyererei
ENSHGLG00100016879	POP1	100	44.995	ENSPNAG00000000265	pop1	100	42.701	Pygocentrus_nattereri
ENSHGLG00100016879	POP1	100	76.246	ENSRNOG00000005243	Pop1	100	76.246	Rattus_norvegicus
ENSHGLG00100016879	POP1	100	81.641	ENSRBIG00000007996	POP1	100	81.641	Rhinopithecus_bieti
ENSHGLG00100016879	POP1	100	81.738	ENSRROG00000012334	POP1	100	81.738	Rhinopithecus_roxellana
ENSHGLG00100016879	POP1	99	81.028	ENSSBOG00000020830	POP1	100	81.028	Saimiri_boliviensis_boliviensis
ENSHGLG00100016879	POP1	100	65.300	ENSSHAG00000000296	POP1	100	65.514	Sarcophilus_harrisii
ENSHGLG00100016879	POP1	100	47.483	ENSSFOG00015007429	pop1	99	47.288	Scleropages_formosus
ENSHGLG00100016879	POP1	86	51.840	ENSSMAG00000010467	POP1	98	47.265	Scophthalmus_maximus
ENSHGLG00100016879	POP1	100	46.730	ENSSDUG00000007817	POP1	100	46.730	Seriola_dumerili
ENSHGLG00100016879	POP1	100	47.064	ENSSLDG00000012565	POP1	100	46.780	Seriola_lalandi_dorsalis
ENSHGLG00100016879	POP1	100	57.640	ENSSPUG00000003550	-	100	57.640	Sphenodon_punctatus
ENSHGLG00100016879	POP1	90	49.409	ENSSPAG00000014955	pop1	93	49.349	Stegastes_partitus
ENSHGLG00100016879	POP1	100	77.419	ENSSSCG00000006078	POP1	100	77.419	Sus_scrofa
ENSHGLG00100016879	POP1	92	54.507	ENSTGUG00000012011	-	100	53.919	Taeniopygia_guttata
ENSHGLG00100016879	POP1	89	48.815	ENSTRUG00000010856	pop1	92	48.172	Takifugu_rubripes
ENSHGLG00100016879	POP1	92	48.384	ENSTNIG00000013297	pop1	99	48.279	Tetraodon_nigroviridis
ENSHGLG00100016879	POP1	95	76.970	ENSTBEG00000014214	POP1	100	76.970	Tupaia_belangeri
ENSHGLG00100016879	POP1	100	77.148	ENSTTRG00000016071	POP1	100	77.148	Tursiops_truncatus
ENSHGLG00100016879	POP1	99	75.321	ENSUAMG00000017309	POP1	100	75.321	Ursus_americanus
ENSHGLG00100016879	POP1	100	77.444	ENSUMAG00000016952	POP1	100	86.235	Ursus_maritimus
ENSHGLG00100016879	POP1	82	86.813	ENSVPAG00000008278	POP1	82	86.813	Vicugna_pacos
ENSHGLG00100016879	POP1	100	79.102	ENSVVUG00000010994	POP1	100	79.102	Vulpes_vulpes
ENSHGLG00100016879	POP1	100	42.146	ENSXCOG00000017043	POP1	100	41.794	Xiphophorus_couchianus
ENSHGLG00100016879	POP1	100	46.146	ENSXMAG00000002472	POP1	100	45.954	Xiphophorus_maculatus