EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100016984 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 98114 bases
Position: chrJH166946.1:3187918-3286031
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100023109	La	PF05383.17	3.9e-17	1	1
ENSHGLP00100023110	La	PF05383.17	3.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100023350	-	2154	-	ENSHGLP00100023110	717 (aa)	-	-
ENSHGLT00100023349	-	2151	-	ENSHGLP00100023109	716 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100016984's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100016984's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100016984	-	100	88.981	ENSHGLG00100011678	-	100	88.308
ENSHGLG00100016984	-	99	40.374	ENSHGLG00100016220	-	94	39.205
ENSHGLG00100016984	-	64	74.617	ENSHGLG00100002832	-	93	80.449
ENSHGLG00100016984	-	73	38.364	ENSHGLG00100017261	-	58	45.187

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100016984	-	100	85.852	ENSG00000161813	LARP4	100	92.800	Homo_sapiens
ENSHGLG00100016984	-	99	45.575	ENSAPOG00000021331	larp4ab	99	45.033	Acanthochromis_polyacanthus
ENSHGLG00100016984	-	99	50.129	ENSAPOG00000007142	larp4aa	95	49.743	Acanthochromis_polyacanthus
ENSHGLG00100016984	-	99	85.931	ENSAMEG00000001275	LARP4	100	85.931	Ailuropoda_melanoleuca
ENSHGLG00100016984	-	53	61.538	ENSACIG00000001198	larp4aa	94	72.189	Amphilophus_citrinellus
ENSHGLG00100016984	-	99	45.059	ENSAOCG00000006387	larp4ab	99	44.386	Amphiprion_ocellaris
ENSHGLG00100016984	-	99	49.485	ENSAOCG00000002408	larp4aa	95	47.854	Amphiprion_ocellaris
ENSHGLG00100016984	-	99	49.356	ENSAPEG00000019058	larp4aa	95	47.727	Amphiprion_percula
ENSHGLG00100016984	-	51	61.662	ENSAPEG00000015441	larp4ab	98	61.662	Amphiprion_percula
ENSHGLG00100016984	-	99	43.173	ENSATEG00000001018	larp4ab	99	43.823	Anabas_testudineus
ENSHGLG00100016984	-	99	69.672	ENSAPLG00000013661	LARP4	99	69.262	Anas_platyrhynchos
ENSHGLG00100016984	-	100	65.088	ENSACAG00000017133	LARP4	97	64.682	Anolis_carolinensis
ENSHGLG00100016984	-	100	83.946	ENSANAG00000029342	LARP4	97	90.107	Aotus_nancymaae
ENSHGLG00100016984	-	52	56.283	ENSACLG00000000777	larp4ab	99	56.283	Astatotilapia_calliptera
ENSHGLG00100016984	-	53	61.440	ENSACLG00000002575	larp4aa	95	47.097	Astatotilapia_calliptera
ENSHGLG00100016984	-	99	46.401	ENSAMXG00000001515	larp4ab	95	47.233	Astyanax_mexicanus
ENSHGLG00100016984	-	99	49.356	ENSAMXG00000036493	larp4aa	94	49.871	Astyanax_mexicanus
ENSHGLG00100016984	-	100	84.574	ENSBTAG00000017164	LARP4	100	84.574	Bos_taurus
ENSHGLG00100016984	-	100	84.636	ENSCJAG00000021131	LARP4	100	90.335	Callithrix_jacchus
ENSHGLG00100016984	-	100	87.052	ENSCAFG00000008174	LARP4	100	87.052	Canis_familiaris
ENSHGLG00100016984	-	99	87.119	ENSCAFG00020014554	LARP4	99	88.339	Canis_lupus_dingo
ENSHGLG00100016984	-	100	84.844	ENSCHIG00000025965	LARP4	100	84.844	Capra_hircus
ENSHGLG00100016984	-	100	86.283	ENSTSYG00000004342	LARP4	97	91.444	Carlito_syrichta
ENSHGLG00100016984	-	99	70.950	ENSCAPG00000012942	LARP4	100	70.391	Cavia_aperea
ENSHGLG00100016984	-	100	84.732	ENSCPOG00000020519	LARP4	100	84.732	Cavia_porcellus
ENSHGLG00100016984	-	100	84.182	ENSCCAG00000024439	LARP4	97	90.374	Cebus_capucinus
ENSHGLG00100016984	-	99	84.371	ENSCATG00000044528	LARP4	100	84.371	Cercocebus_atys
ENSHGLG00100016984	-	100	91.322	ENSCLAG00000001829	LARP4	100	91.322	Chinchilla_lanigera
ENSHGLG00100016984	-	58	88.571	ENSCHOG00000010490	-	58	88.571	Choloepus_hoffmanni
ENSHGLG00100016984	-	100	70.867	ENSCPBG00000019407	LARP4	91	70.461	Chrysemys_picta_bellii
ENSHGLG00100016984	-	100	78.194	ENSCANG00000033097	-	100	82.510	Colobus_angolensis_palliatus
ENSHGLG00100016984	-	100	86.283	ENSCANG00000029159	-	97	91.979	Colobus_angolensis_palliatus
ENSHGLG00100016984	-	100	83.654	ENSCGRG00001010818	Larp4	100	83.654	Cricetulus_griseus_chok1gshd
ENSHGLG00100016984	-	100	83.494	ENSCGRG00000009382	Larp4	100	83.518	Cricetulus_griseus_crigri
ENSHGLG00100016984	-	61	51.907	ENSCSEG00000003240	larp4ab	92	44.109	Cynoglossus_semilaevis
ENSHGLG00100016984	-	100	47.273	ENSDARG00000074979	larp4ab	85	78.146	Danio_rerio
ENSHGLG00100016984	-	99	47.429	ENSDARG00000078401	larp4aa	95	47.301	Danio_rerio
ENSHGLG00100016984	-	100	84.225	ENSDNOG00000038525	LARP4	100	84.225	Dasypus_novemcinctus
ENSHGLG00100016984	-	100	85.144	ENSDORG00000004013	Larp4	100	85.144	Dipodomys_ordii
ENSHGLG00100016984	-	72	73.864	ENSETEG00000011683	LARP4	73	73.864	Echinops_telfairi
ENSHGLG00100016984	-	71	42.463	ENSEBUG00000004426	LARP4	62	50.136	Eptatretus_burgeri
ENSHGLG00100016984	-	73	40.325	ENSEBUG00000010394	LARP4	89	38.860	Eptatretus_burgeri
ENSHGLG00100016984	-	99	85.007	ENSEASG00005004356	LARP4	100	92.672	Equus_asinus_asinus
ENSHGLG00100016984	-	100	87.620	ENSECAG00000012479	LARP4	100	87.620	Equus_caballus
ENSHGLG00100016984	-	76	98.291	ENSEEUG00000000316	LARP4	76	98.291	Erinaceus_europaeus
ENSHGLG00100016984	-	99	47.333	ENSELUG00000018650	larp4ab	85	74.894	Esox_lucius
ENSHGLG00100016984	-	99	43.050	ENSELUG00000000395	larp4aa	85	60.686	Esox_lucius
ENSHGLG00100016984	-	100	86.694	ENSFCAG00000031897	LARP4	97	92.513	Felis_catus
ENSHGLG00100016984	-	86	66.086	ENSFALG00000002114	LARP4	98	67.130	Ficedula_albicollis
ENSHGLG00100016984	-	100	92.297	ENSFDAG00000006406	-	100	92.297	Fukomys_damarensis
ENSHGLG00100016984	-	99	43.484	ENSFHEG00000013854	larp4ab	99	42.952	Fundulus_heteroclitus
ENSHGLG00100016984	-	99	47.637	ENSFHEG00000004338	larp4aa	95	47.134	Fundulus_heteroclitus
ENSHGLG00100016984	-	99	49.009	ENSGMOG00000008246	larp4aa	95	49.669	Gadus_morhua
ENSHGLG00100016984	-	95	68.279	ENSGALG00000042122	LARP4	93	67.852	Gallus_gallus
ENSHGLG00100016984	-	99	43.553	ENSGAFG00000021777	larp4ab	99	43.026	Gambusia_affinis
ENSHGLG00100016984	-	99	49.471	ENSGACG00000008381	larp4aa	99	64.191	Gasterosteus_aculeatus
ENSHGLG00100016984	-	99	45.395	ENSGACG00000000680	larp4ab	99	45.886	Gasterosteus_aculeatus
ENSHGLG00100016984	-	100	69.919	ENSGAGG00000006969	LARP4	100	69.512	Gopherus_agassizii
ENSHGLG00100016984	-	100	82.566	ENSGGOG00000015230	LARP4	99	90.667	Gorilla_gorilla
ENSHGLG00100016984	-	53	61.440	ENSHBUG00000023074	larp4aa	95	47.097	Haplochromis_burtoni
ENSHGLG00100016984	-	85	90.686	ENSHGLG00000013875	-	100	89.542	Heterocephalus_glaber_female
ENSHGLG00100016984	-	64	74.617	ENSHGLG00000010979	-	93	80.449	Heterocephalus_glaber_female
ENSHGLG00100016984	-	91	99.389	ENSHGLG00000005513	-	100	99.389	Heterocephalus_glaber_female
ENSHGLG00100016984	-	99	48.895	ENSHCOG00000015951	larp4aa	95	48.765	Hippocampus_comes
ENSHGLG00100016984	-	99	41.923	ENSHCOG00000020857	larp4ab	99	41.789	Hippocampus_comes
ENSHGLG00100016984	-	100	47.106	ENSIPUG00000021659	larp4ab	100	45.839	Ictalurus_punctatus
ENSHGLG00100016984	-	99	47.558	ENSIPUG00000007514	larp4aa	95	48.615	Ictalurus_punctatus
ENSHGLG00100016984	-	100	86.538	ENSSTOG00000003553	LARP4	100	86.538	Ictidomys_tridecemlineatus
ENSHGLG00100016984	-	51	69.106	ENSJJAG00000014649	-	95	85.714	Jaculus_jaculus
ENSHGLG00100016984	-	99	44.782	ENSKMAG00000018556	larp4ab	99	45.119	Kryptolebias_marmoratus
ENSHGLG00100016984	-	99	43.823	ENSLBEG00000019306	larp4ab	100	44.226	Labrus_bergylta
ENSHGLG00100016984	-	99	47.522	ENSLBEG00000014537	larp4aa	94	47.355	Labrus_bergylta
ENSHGLG00100016984	-	99	58.289	ENSLACG00000019090	LARP4	99	57.487	Latimeria_chalumnae
ENSHGLG00100016984	-	99	52.418	ENSLOCG00000007113	larp4ab	95	52.680	Lepisosteus_oculatus
ENSHGLG00100016984	-	100	85.027	ENSLAFG00000005160	LARP4	100	85.027	Loxodonta_africana
ENSHGLG00100016984	-	100	85.953	ENSMFAG00000043681	LARP4	97	92.246	Macaca_fascicularis
ENSHGLG00100016984	-	100	85.850	ENSMMUG00000008172	LARP4	97	92.246	Macaca_mulatta
ENSHGLG00100016984	-	87	68.889	ENSMNEG00000037799	-	99	74.731	Macaca_nemestrina
ENSHGLG00100016984	-	93	86.647	ENSMNEG00000034602	LARP4	100	86.287	Macaca_nemestrina
ENSHGLG00100016984	-	100	86.420	ENSMLEG00000039661	LARP4	97	91.979	Mandrillus_leucophaeus
ENSHGLG00100016984	-	99	45.182	ENSMAMG00000002616	larp4ab	99	45.182	Mastacembelus_armatus
ENSHGLG00100016984	-	99	47.837	ENSMAMG00000011206	larp4aa	95	47.637	Mastacembelus_armatus
ENSHGLG00100016984	-	99	46.329	ENSMZEG00005001813	larp4aa	95	47.097	Maylandia_zebra
ENSHGLG00100016984	-	52	56.283	ENSMZEG00005007771	larp4ab	99	56.283	Maylandia_zebra
ENSHGLG00100016984	-	95	68.137	ENSMGAG00000010598	LARP4	93	67.518	Meleagris_gallopavo
ENSHGLG00100016984	-	99	80.886	ENSMICG00000030156	-	99	80.886	Microcebus_murinus
ENSHGLG00100016984	-	87	86.142	ENSMICG00000012388	-	98	88.827	Microcebus_murinus
ENSHGLG00100016984	-	100	82.830	ENSMOCG00000020635	Larp4	100	82.830	Microtus_ochrogaster
ENSHGLG00100016984	-	99	46.762	ENSMMOG00000004785	larp4aa	95	46.244	Mola_mola
ENSHGLG00100016984	-	100	44.063	ENSMMOG00000021861	larp4ab	94	52.926	Mola_mola
ENSHGLG00100016984	-	95	73.296	MGP_CAROLIEiJ_G0020281	Larp4	85	89.394	Mus_caroli
ENSHGLG00100016984	-	100	84.478	ENSMUSG00000023025	Larp4	100	84.535	Mus_musculus
ENSHGLG00100016984	-	100	84.890	MGP_PahariEiJ_G0020284	Larp4	100	84.890	Mus_pahari
ENSHGLG00100016984	-	99	86.326	ENSMPUG00000008706	LARP4	96	86.326	Mustela_putorius_furo
ENSHGLG00100016984	-	100	83.676	ENSMLUG00000012513	-	100	83.584	Myotis_lucifugus
ENSHGLG00100016984	-	100	83.516	ENSNGAG00000001577	-	100	83.516	Nannospalax_galili
ENSHGLG00100016984	-	52	56.267	ENSNBRG00000015675	larp4ab	99	56.267	Neolamprologus_brichardi
ENSHGLG00100016984	-	99	46.144	ENSNBRG00000011292	larp4aa	95	47.112	Neolamprologus_brichardi
ENSHGLG00100016984	-	100	86.401	ENSNLEG00000017798	LARP4	97	91.176	Nomascus_leucogenys
ENSHGLG00100016984	-	66	72.800	ENSOPRG00000004592	-	80	72.800	Ochotona_princeps
ENSHGLG00100016984	-	99	86.130	ENSODEG00000009770	LARP4	100	86.130	Octodon_degus
ENSHGLG00100016984	-	100	47.613	ENSONIG00000011895	larp4aa	99	47.871	Oreochromis_niloticus
ENSHGLG00100016984	-	100	43.783	ENSONIG00000019124	larp4ab	100	43.519	Oreochromis_niloticus
ENSHGLG00100016984	-	73	73.913	ENSOANG00000004373	LARP4	94	73.624	Ornithorhynchus_anatinus
ENSHGLG00100016984	-	100	83.676	ENSOCUG00000026872	-	99	83.676	Oryctolagus_cuniculus
ENSHGLG00100016984	-	100	84.636	ENSOCUG00000021417	-	100	84.636	Oryctolagus_cuniculus
ENSHGLG00100016984	-	99	49.285	ENSORLG00000006758	larp4aa	95	48.698	Oryzias_latipes
ENSHGLG00100016984	-	99	48.638	ENSORLG00020010258	larp4aa	95	48.698	Oryzias_latipes_hni
ENSHGLG00100016984	-	99	49.025	ENSORLG00015002292	larp4aa	95	49.022	Oryzias_latipes_hsok
ENSHGLG00100016984	-	99	50.204	ENSOMEG00000019749	larp4aa	97	66.575	Oryzias_melastigma
ENSHGLG00100016984	-	72	86.486	ENSOGAG00000001415	LARP4	99	86.486	Otolemur_garnettii
ENSHGLG00100016984	-	100	84.532	ENSOARG00000017702	LARP4	99	84.532	Ovis_aries
ENSHGLG00100016984	-	90	88.662	ENSPPAG00000035100	LARP4	99	89.811	Pan_paniscus
ENSHGLG00100016984	-	64	70.460	ENSPPAG00000039122	-	96	75.426	Pan_paniscus
ENSHGLG00100016984	-	100	86.694	ENSPPRG00000004522	LARP4	97	92.513	Panthera_pardus
ENSHGLG00100016984	-	100	86.694	ENSPTIG00000015617	LARP4	97	92.513	Panthera_tigris_altaica
ENSHGLG00100016984	-	64	70.241	ENSPTRG00000045907	-	98	77.507	Pan_troglodytes
ENSHGLG00100016984	-	100	86.008	ENSPTRG00000004935	LARP4	97	90.909	Pan_troglodytes
ENSHGLG00100016984	-	100	85.714	ENSPANG00000022964	LARP4	97	91.979	Papio_anubis
ENSHGLG00100016984	-	99	50.129	ENSPKIG00000005950	larp4ab	100	47.512	Paramormyrops_kingsleyae
ENSHGLG00100016984	-	99	69.399	ENSPSIG00000015867	LARP4	99	68.989	Pelodiscus_sinensis
ENSHGLG00100016984	-	51	55.348	ENSPMGG00000002719	larp4ab	98	55.882	Periophthalmus_magnuspinnatus
ENSHGLG00100016984	-	99	78.052	ENSPEMG00000018433	Larp4	94	83.226	Peromyscus_maniculatus_bairdii
ENSHGLG00100016984	-	100	74.526	ENSPCIG00000000384	LARP4	100	74.119	Phascolarctos_cinereus
ENSHGLG00100016984	-	99	48.780	ENSPFOG00000013148	larp4aa	99	47.326	Poecilia_formosa
ENSHGLG00100016984	-	99	44.459	ENSPFOG00000009764	larp4ab	99	44.059	Poecilia_formosa
ENSHGLG00100016984	-	99	48.780	ENSPLAG00000013626	larp4aa	95	48.582	Poecilia_latipinna
ENSHGLG00100016984	-	99	44.192	ENSPLAG00000008502	larp4ab	99	43.792	Poecilia_latipinna
ENSHGLG00100016984	-	99	48.780	ENSPMEG00000014271	larp4aa	95	48.582	Poecilia_mexicana
ENSHGLG00100016984	-	99	43.808	ENSPMEG00000002720	larp4ab	99	43.409	Poecilia_mexicana
ENSHGLG00100016984	-	51	59.309	ENSPREG00000016263	larp4ab	97	58.886	Poecilia_reticulata
ENSHGLG00100016984	-	99	48.903	ENSPREG00000022597	larp4aa	95	49.419	Poecilia_reticulata
ENSHGLG00100016984	-	72	88.077	ENSPPYG00000004512	-	100	88.077	Pongo_abelii
ENSHGLG00100016984	-	93	76.706	ENSPCAG00000003671	LARP4	99	76.706	Procavia_capensis
ENSHGLG00100016984	-	87	90.080	ENSPCOG00000026291	LARP4	98	91.078	Propithecus_coquereli
ENSHGLG00100016984	-	93	75.816	ENSPVAG00000016840	LARP4	91	75.816	Pteropus_vampyrus
ENSHGLG00100016984	-	53	61.440	ENSPNYG00000022265	larp4aa	95	47.097	Pundamilia_nyererei
ENSHGLG00100016984	-	100	47.643	ENSPNAG00000014478	larp4ab	100	47.898	Pygocentrus_nattereri
ENSHGLG00100016984	-	96	49.394	ENSPNAG00000024770	larp4aa	94	49.933	Pygocentrus_nattereri
ENSHGLG00100016984	-	87	91.375	ENSRBIG00000038857	-	100	90.637	Rhinopithecus_bieti
ENSHGLG00100016984	-	89	76.623	ENSRBIG00000036890	-	100	76.623	Rhinopithecus_bieti
ENSHGLG00100016984	-	100	85.539	ENSRROG00000042764	-	99	90.337	Rhinopithecus_roxellana
ENSHGLG00100016984	-	100	76.923	ENSRROG00000025487	-	100	76.923	Rhinopithecus_roxellana
ENSHGLG00100016984	-	100	83.676	ENSSBOG00000026650	LARP4	100	84.522	Saimiri_boliviensis_boliviensis
ENSHGLG00100016984	-	99	49.059	ENSSFOG00015014096	larp4ab	100	48.708	Scleropages_formosus
ENSHGLG00100016984	-	100	49.605	ENSSFOG00015003868	larp4aa	100	48.947	Scleropages_formosus
ENSHGLG00100016984	-	99	45.942	ENSSMAG00000002838	larp4ab	99	46.736	Scophthalmus_maximus
ENSHGLG00100016984	-	99	46.234	ENSSDUG00000006655	larp4ab	99	46.323	Seriola_dumerili
ENSHGLG00100016984	-	99	46.572	ENSSLDG00000001791	larp4ab	99	46.701	Seriola_lalandi_dorsalis
ENSHGLG00100016984	-	99	80.796	ENSSARG00000012469	LARP4	100	80.796	Sorex_araneus
ENSHGLG00100016984	-	95	66.620	ENSSPUG00000016552	LARP4	93	67.044	Sphenodon_punctatus
ENSHGLG00100016984	-	99	46.032	ENSSPAG00000002172	larp4ab	99	44.709	Stegastes_partitus
ENSHGLG00100016984	-	99	49.004	ENSSPAG00000007222	larp4aa	98	64.946	Stegastes_partitus
ENSHGLG00100016984	-	100	86.027	ENSSSCG00000028516	LARP4	100	86.207	Sus_scrofa
ENSHGLG00100016984	-	100	67.075	ENSTGUG00000003479	LARP4	100	67.483	Taeniopygia_guttata
ENSHGLG00100016984	-	99	43.394	ENSTRUG00000007206	larp4ab	99	44.901	Takifugu_rubripes
ENSHGLG00100016984	-	50	59.392	ENSTRUG00000015939	larp4aa	100	59.392	Takifugu_rubripes
ENSHGLG00100016984	-	99	47.526	ENSTNIG00000015109	larp4aa	50	61.299	Tetraodon_nigroviridis
ENSHGLG00100016984	-	99	44.220	ENSTNIG00000014571	larp4ab	54	58.549	Tetraodon_nigroviridis
ENSHGLG00100016984	-	99	74.588	ENSTBEG00000005167	LARP4	100	74.588	Tupaia_belangeri
ENSHGLG00100016984	-	100	83.787	ENSTTRG00000003764	LARP4	99	84.362	Tursiops_truncatus
ENSHGLG00100016984	-	73	88.123	ENSUAMG00000013764	LARP4	99	90.112	Ursus_americanus
ENSHGLG00100016984	-	100	85.852	ENSUMAG00000008473	LARP4	100	85.852	Ursus_maritimus
ENSHGLG00100016984	-	100	84.438	ENSVPAG00000010136	LARP4	100	84.054	Vicugna_pacos
ENSHGLG00100016984	-	100	86.520	ENSVVUG00000024717	LARP4	97	91.623	Vulpes_vulpes
ENSHGLG00100016984	-	93	60.087	ENSXETG00000007283	larp4	100	58.781	Xenopus_tropicalis
ENSHGLG00100016984	-	52	58.947	ENSXCOG00000019635	larp4ab	97	58.947	Xiphophorus_couchianus
ENSHGLG00100016984	-	99	44.357	ENSXMAG00000002156	larp4ab	99	43.832	Xiphophorus_maculatus