EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100017085 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 880 bases
Position: chrJH170676.1:139753-140632
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100023258	SM-ATX	PF14438.6	2e-08	1	1
ENSHGLP00100023258	LSM14	PF12701.7	1.5e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100023499	-	303	-	ENSHGLP00100023258	100 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100017085's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100017085's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100017085	-	97	96.907	ENSHGLG00100000160	-	76	96.907

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100017085	-	97	96.907	ENSG00000257103	LSM14A	98	95.000	Homo_sapiens
ENSHGLG00100017085	-	95	89.474	ENSAPEG00000012119	lsm14aa	92	89.474	Amphiprion_percula
ENSHGLG00100017085	-	97	96.907	ENSANAG00000019299	-	98	95.000	Aotus_nancymaae
ENSHGLG00100017085	-	100	79.000	ENSANAG00000031175	-	100	79.000	Aotus_nancymaae
ENSHGLG00100017085	-	84	89.286	ENSACLG00000018221	-	83	89.286	Astatotilapia_calliptera
ENSHGLG00100017085	-	97	96.907	ENSCJAG00000010360	LSM14A	98	95.000	Callithrix_jacchus
ENSHGLG00100017085	-	98	86.000	ENSCCAG00000038098	-	99	86.000	Cebus_capucinus
ENSHGLG00100017085	-	97	84.536	ENSCCAG00000037290	-	89	84.536	Cebus_capucinus
ENSHGLG00100017085	-	97	95.876	ENSCCAG00000028536	-	97	95.876	Cebus_capucinus
ENSHGLG00100017085	-	95	87.368	ENSCSEG00000021457	lsm14aa	100	83.333	Cynoglossus_semilaevis
ENSHGLG00100017085	-	97	93.814	ENSDARG00000006600	lsm14aa	98	95.181	Danio_rerio
ENSHGLG00100017085	-	95	97.895	ENSGAGG00000016098	-	87	97.895	Gopherus_agassizii
ENSHGLG00100017085	-	81	95.062	ENSHCOG00000001089	-	82	95.062	Hippocampus_comes
ENSHGLG00100017085	-	86	86.047	ENSHCOG00000009227	-	85	86.047	Hippocampus_comes
ENSHGLG00100017085	-	95	93.684	ENSLBEG00000010487	lsm14aa	82	93.684	Labrus_bergylta
ENSHGLG00100017085	-	99	87.879	ENSMZEG00005005945	-	71	87.879	Maylandia_zebra
ENSHGLG00100017085	-	75	92.000	ENSMMOG00000016341	-	85	92.000	Mola_mola
ENSHGLG00100017085	-	97	88.660	ENSNLEG00000034705	-	80	88.660	Nomascus_leucogenys
ENSHGLG00100017085	-	95	92.632	ENSORLG00000028980	-	80	92.632	Oryzias_latipes
ENSHGLG00100017085	-	96	91.667	ENSORLG00020019931	-	81	91.667	Oryzias_latipes_hni
ENSHGLG00100017085	-	97	58.252	ENSORLG00015018292	-	94	58.252	Oryzias_latipes_hsok
ENSHGLG00100017085	-	97	90.722	ENSOMEG00000016637	-	60	90.722	Oryzias_melastigma
ENSHGLG00100017085	-	95	96.842	ENSPTRG00000040949	-	97	95.789	Pan_troglodytes
ENSHGLG00100017085	-	78	92.308	ENSPMGG00000007198	-	73	92.308	Periophthalmus_magnuspinnatus
ENSHGLG00100017085	-	96	89.583	ENSPMGG00000000220	lsm14aa	92	89.583	Periophthalmus_magnuspinnatus
ENSHGLG00100017085	-	83	97.590	ENSPCOG00000016240	-	90	95.294	Propithecus_coquereli
ENSHGLG00100017085	-	94	86.458	ENSSBOG00000021178	-	67	86.458	Saimiri_boliviensis_boliviensis
ENSHGLG00100017085	-	91	83.516	ENSSBOG00000023312	-	89	83.516	Saimiri_boliviensis_boliviensis
ENSHGLG00100017085	-	96	96.875	ENSSBOG00000020141	-	93	96.842	Saimiri_boliviensis_boliviensis
ENSHGLG00100017085	-	79	89.873	ENSTRUG00000024267	-	54	89.873	Takifugu_rubripes
ENSHGLG00100017085	-	97	96.907	ENSUAMG00000017314	LSM14A	89	94.059	Ursus_americanus
ENSHGLG00100017085	-	88	73.864	ENSUMAG00000004345	-	91	73.864	Ursus_maritimus