EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100017261 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 1943 bases
Position: chrJH171164.1:1232652-1234594
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100023500	La	PF05383.17	7.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100023742	-	1743	-	ENSHGLP00100023500	580 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100017261's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100017261's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100017261	-	100	81.327	ENSHGLG00100016220	-	88	81.327
ENSHGLG00100017261	-	74	38.444	ENSHGLG00100002832	-	95	38.274
ENSHGLG00100017261	-	80	37.931	ENSHGLG00100011678	-	70	37.931
ENSHGLG00100017261	-	58	45.187	ENSHGLG00100016984	-	73	38.364

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100017261	-	100	73.806	ENSG00000107929	LARP4B	93	79.245	Homo_sapiens
ENSHGLG00100017261	-	100	51.935	ENSAPOG00000020531	LARP4B	89	53.846	Acanthochromis_polyacanthus
ENSHGLG00100017261	-	100	71.538	ENSAMEG00000001810	LARP4B	89	71.538	Ailuropoda_melanoleuca
ENSHGLG00100017261	-	93	54.196	ENSAOCG00000007887	-	73	76.596	Amphiprion_ocellaris
ENSHGLG00100017261	-	100	50.885	ENSAPEG00000002512	LARP4B	86	50.885	Amphiprion_percula
ENSHGLG00100017261	-	100	47.763	ENSATEG00000012614	LARP4B	87	47.813	Anabas_testudineus
ENSHGLG00100017261	-	100	63.788	ENSAPLG00000003813	LARP4B	86	63.788	Anas_platyrhynchos
ENSHGLG00100017261	-	100	62.980	ENSACAG00000002858	LARP4B	88	62.980	Anolis_carolinensis
ENSHGLG00100017261	-	100	73.498	ENSANAG00000007531	-	88	73.498	Aotus_nancymaae
ENSHGLG00100017261	-	100	53.971	ENSACLG00000026356	LARP4B	85	54.295	Astatotilapia_calliptera
ENSHGLG00100017261	-	100	44.611	ENSAMXG00000003335	larp4b	90	44.611	Astyanax_mexicanus
ENSHGLG00100017261	-	100	70.124	ENSBTAG00000013899	LARP4B	88	70.279	Bos_taurus
ENSHGLG00100017261	-	100	73.190	ENSCJAG00000018434	LARP4B	88	73.190	Callithrix_jacchus
ENSHGLG00100017261	-	100	71.846	ENSCAFG00020004209	LARP4B	87	75.728	Canis_lupus_dingo
ENSHGLG00100017261	-	100	69.969	ENSCHIG00000013543	LARP4B	88	69.969	Capra_hircus
ENSHGLG00100017261	-	79	77.228	ENSTSYG00000002568	LARP4B	85	77.228	Carlito_syrichta
ENSHGLG00100017261	-	95	69.435	ENSCAPG00000009725	LARP4B	84	69.435	Cavia_aperea
ENSHGLG00100017261	-	100	78.120	ENSCPOG00000009375	LARP4B	88	78.120	Cavia_porcellus
ENSHGLG00100017261	-	100	73.344	ENSCCAG00000024869	LARP4B	88	73.344	Cebus_capucinus
ENSHGLG00100017261	-	100	73.806	ENSCATG00000019750	LARP4B	88	73.806	Cercocebus_atys
ENSHGLG00100017261	-	100	78.000	ENSCLAG00000011570	LARP4B	88	78.000	Chinchilla_lanigera
ENSHGLG00100017261	-	61	73.387	ENSCHOG00000007831	-	53	73.387	Choloepus_hoffmanni
ENSHGLG00100017261	-	100	64.516	ENSCPBG00000017063	LARP4B	88	64.516	Chrysemys_picta_bellii
ENSHGLG00100017261	-	100	72.291	ENSCANG00000038021	LARP4B	88	72.291	Colobus_angolensis_palliatus
ENSHGLG00100017261	-	100	74.194	ENSCGRG00001022930	Larp4b	86	76.450	Cricetulus_griseus_chok1gshd
ENSHGLG00100017261	-	100	74.194	ENSCGRG00000006022	Larp4b	86	76.450	Cricetulus_griseus_crigri
ENSHGLG00100017261	-	100	50.082	ENSCSEG00000007342	LARP4B	86	50.245	Cynoglossus_semilaevis
ENSHGLG00100017261	-	100	50.000	ENSCVAG00000008910	LARP4B	85	50.998	Cyprinodon_variegatus
ENSHGLG00100017261	-	95	45.039	ENSDARG00000062146	larp4b	85	45.840	Danio_rerio
ENSHGLG00100017261	-	92	73.826	ENSDNOG00000045543	-	100	77.823	Dasypus_novemcinctus
ENSHGLG00100017261	-	100	74.923	ENSDORG00000009328	Larp4b	86	76.950	Dipodomys_ordii
ENSHGLG00100017261	-	83	68.862	ENSETEG00000011249	LARP4B	76	68.862	Echinops_telfairi
ENSHGLG00100017261	-	100	72.462	ENSEASG00005019068	-	88	72.615	Equus_asinus_asinus
ENSHGLG00100017261	-	100	72.308	ENSECAG00000024040	LARP4B	88	72.462	Equus_caballus
ENSHGLG00100017261	-	100	69.678	ENSEEUG00000008391	LARP4B	87	69.678	Erinaceus_europaeus
ENSHGLG00100017261	-	84	42.262	ENSELUG00000001417	-	77	42.262	Esox_lucius
ENSHGLG00100017261	-	100	49.642	ENSELUG00000008626	LARP4B	87	49.641	Esox_lucius
ENSHGLG00100017261	-	100	70.399	ENSFCAG00000000721	-	89	70.399	Felis_catus
ENSHGLG00100017261	-	100	63.692	ENSFALG00000006961	LARP4B	88	63.692	Ficedula_albicollis
ENSHGLG00100017261	-	100	80.710	ENSFDAG00000006158	LARP4B	85	80.710	Fukomys_damarensis
ENSHGLG00100017261	-	100	46.751	ENSFHEG00000013037	LARP4B	61	85.841	Fundulus_heteroclitus
ENSHGLG00100017261	-	62	58.760	ENSGMOG00000010818	-	59	58.667	Gadus_morhua
ENSHGLG00100017261	-	100	63.456	ENSGALG00000006672	LARP4B	88	63.456	Gallus_gallus
ENSHGLG00100017261	-	100	51.622	ENSGACG00000017535	LARP4B	88	51.917	Gasterosteus_aculeatus
ENSHGLG00100017261	-	90	64.815	ENSGAGG00000008598	LARP4B	87	64.815	Gopherus_agassizii
ENSHGLG00100017261	-	100	73.652	ENSGGOG00000003572	LARP4B	88	73.652	Gorilla_gorilla
ENSHGLG00100017261	-	100	51.608	ENSHBUG00000007535	LARP4B	85	51.914	Haplochromis_burtoni
ENSHGLG00100017261	-	100	80.923	ENSHGLG00000012936	LARP4B	86	83.293	Heterocephalus_glaber_female
ENSHGLG00100017261	-	100	49.676	ENSHCOG00000011581	LARP4B	75	50.000	Hippocampus_comes
ENSHGLG00100017261	-	89	48.155	ENSIPUG00000009705	larp4b	81	48.148	Ictalurus_punctatus
ENSHGLG00100017261	-	100	75.943	ENSSTOG00000000587	LARP4B	86	81.265	Ictidomys_tridecemlineatus
ENSHGLG00100017261	-	100	73.806	ENSJJAG00000020847	Larp4b	88	73.806	Jaculus_jaculus
ENSHGLG00100017261	-	100	51.227	ENSKMAG00000021674	LARP4B	84	53.752	Kryptolebias_marmoratus
ENSHGLG00100017261	-	96	50.713	ENSLBEG00000025293	-	79	53.061	Labrus_bergylta
ENSHGLG00100017261	-	90	56.645	ENSLACG00000009492	LARP4B	87	57.191	Latimeria_chalumnae
ENSHGLG00100017261	-	100	56.925	ENSLOCG00000012290	larp4b	88	56.925	Lepisosteus_oculatus
ENSHGLG00100017261	-	100	72.936	ENSLAFG00000015334	LARP4B	88	72.936	Loxodonta_africana
ENSHGLG00100017261	-	100	73.960	ENSMFAG00000001766	LARP4B	88	72.291	Macaca_fascicularis
ENSHGLG00100017261	-	100	73.960	ENSMMUG00000005279	LARP4B	88	73.960	Macaca_mulatta
ENSHGLG00100017261	-	100	73.806	ENSMNEG00000014019	LARP4B	88	72.136	Macaca_nemestrina
ENSHGLG00100017261	-	100	73.652	ENSMLEG00000035198	LARP4B	88	73.652	Mandrillus_leucophaeus
ENSHGLG00100017261	-	100	49.204	ENSMAMG00000013742	LARP4B	86	49.125	Mastacembelus_armatus
ENSHGLG00100017261	-	89	55.898	ENSMZEG00005006498	-	90	56.261	Maylandia_zebra
ENSHGLG00100017261	-	77	56.589	ENSMZEG00005014594	-	70	56.977	Maylandia_zebra
ENSHGLG00100017261	-	100	62.273	ENSMGAG00000005472	LARP4B	88	62.273	Meleagris_gallopavo
ENSHGLG00100017261	-	100	74.540	ENSMAUG00000021657	Larp4b	86	77.153	Mesocricetus_auratus
ENSHGLG00100017261	-	100	68.976	ENSMICG00000001301	LARP4B	87	69.764	Microcebus_murinus
ENSHGLG00100017261	-	89	76.098	ENSMOCG00000021452	Larp4b	86	76.098	Microtus_ochrogaster
ENSHGLG00100017261	-	77	58.051	ENSMMOG00000011253	-	84	50.660	Mola_mola
ENSHGLG00100017261	-	100	62.986	ENSMODG00000005957	LARP4B	86	62.986	Monodelphis_domestica
ENSHGLG00100017261	-	100	47.934	ENSMALG00000012432	LARP4B	88	47.934	Monopterus_albus
ENSHGLG00100017261	-	100	75.039	MGP_CAROLIEiJ_G0018216	Larp4b	86	79.319	Mus_caroli
ENSHGLG00100017261	-	100	74.808	ENSMUSG00000033499	Larp4b	86	78.450	Mus_musculus
ENSHGLG00100017261	-	100	74.884	MGP_PahariEiJ_G0019266	Larp4b	86	78.589	Mus_pahari
ENSHGLG00100017261	-	100	74.654	MGP_SPRETEiJ_G0019074	Larp4b	86	78.450	Mus_spretus
ENSHGLG00100017261	-	100	70.615	ENSMPUG00000016220	LARP4B	86	70.615	Mustela_putorius_furo
ENSHGLG00100017261	-	93	70.067	ENSMLUG00000005880	LARP4B	88	70.067	Myotis_lucifugus
ENSHGLG00100017261	-	100	74.422	ENSNGAG00000001750	Larp4b	88	74.422	Nannospalax_galili
ENSHGLG00100017261	-	77	51.975	ENSNBRG00000020018	LARP4B	69	52.391	Neolamprologus_brichardi
ENSHGLG00100017261	-	100	73.652	ENSNLEG00000013442	LARP4B	88	73.652	Nomascus_leucogenys
ENSHGLG00100017261	-	79	54.348	ENSMEUG00000013114	-	71	54.348	Notamacropus_eugenii
ENSHGLG00100017261	-	100	71.951	ENSOPRG00000003300	LARP4B	88	71.951	Ochotona_princeps
ENSHGLG00100017261	-	100	72.881	ENSODEG00000001109	LARP4B	88	72.881	Octodon_degus
ENSHGLG00100017261	-	100	51.791	ENSONIG00000017705	LARP4B	87	51.709	Oreochromis_niloticus
ENSHGLG00100017261	-	100	63.775	ENSOANG00000006100	LARP4B	88	63.927	Ornithorhynchus_anatinus
ENSHGLG00100017261	-	100	73.363	ENSOCUG00000004950	LARP4B	86	73.363	Oryctolagus_cuniculus
ENSHGLG00100017261	-	100	48.538	ENSORLG00000006080	LARP4B	87	48.830	Oryzias_latipes
ENSHGLG00100017261	-	100	49.616	ENSORLG00020020940	LARP4B	85	50.077	Oryzias_latipes_hni
ENSHGLG00100017261	-	100	49.770	ENSORLG00015020608	LARP4B	86	49.923	Oryzias_latipes_hsok
ENSHGLG00100017261	-	100	48.926	ENSOMEG00000019619	LARP4B	87	48.261	Oryzias_melastigma
ENSHGLG00100017261	-	92	70.033	ENSOGAG00000011540	LARP4B	86	70.033	Otolemur_garnettii
ENSHGLG00100017261	-	100	69.800	ENSOARG00000015320	LARP4B	87	69.800	Ovis_aries
ENSHGLG00100017261	-	100	73.806	ENSPPAG00000039232	LARP4B	88	73.806	Pan_paniscus
ENSHGLG00100017261	-	100	70.769	ENSPPRG00000009489	LARP4B	89	70.769	Panthera_pardus
ENSHGLG00100017261	-	100	70.615	ENSPTIG00000008543	LARP4B	89	70.615	Panthera_tigris_altaica
ENSHGLG00100017261	-	100	73.806	ENSPTRG00000002235	LARP4B	88	73.806	Pan_troglodytes
ENSHGLG00100017261	-	100	73.960	ENSPANG00000023546	LARP4B	88	72.291	Papio_anubis
ENSHGLG00100017261	-	100	51.051	ENSPKIG00000012368	LARP4B	88	51.051	Paramormyrops_kingsleyae
ENSHGLG00100017261	-	88	70.794	ENSPSIG00000005600	LARP4B	99	70.794	Pelodiscus_sinensis
ENSHGLG00100017261	-	89	51.681	ENSPMGG00000008261	LARP4B	76	52.594	Periophthalmus_magnuspinnatus
ENSHGLG00100017261	-	100	74.730	ENSPEMG00000014052	Larp4b	88	74.730	Peromyscus_maniculatus_bairdii
ENSHGLG00100017261	-	100	47.619	ENSPFOG00000000029	LARP4B	87	49.128	Poecilia_formosa
ENSHGLG00100017261	-	100	52.358	ENSPLAG00000002871	LARP4B	85	52.998	Poecilia_latipinna
ENSHGLG00100017261	-	100	49.772	ENSPMEG00000016361	LARP4B	86	50.837	Poecilia_mexicana
ENSHGLG00100017261	-	100	74.000	ENSPPYG00000002035	LARP4B	86	74.000	Pongo_abelii
ENSHGLG00100017261	-	100	73.095	ENSPCOG00000014688	LARP4B	88	73.095	Propithecus_coquereli
ENSHGLG00100017261	-	79	67.520	ENSPVAG00000009784	LARP4B	72	67.520	Pteropus_vampyrus
ENSHGLG00100017261	-	100	51.914	ENSPNYG00000024252	LARP4B	85	52.221	Pundamilia_nyererei
ENSHGLG00100017261	-	100	46.841	ENSPNAG00000028956	larp4b	89	46.841	Pygocentrus_nattereri
ENSHGLG00100017261	-	100	74.422	ENSRNOG00000015888	Larp4b	98	72.265	Rattus_norvegicus
ENSHGLG00100017261	-	100	73.806	ENSRBIG00000033294	LARP4B	88	73.806	Rhinopithecus_bieti
ENSHGLG00100017261	-	100	73.806	ENSRROG00000033879	LARP4B	88	73.806	Rhinopithecus_roxellana
ENSHGLG00100017261	-	100	68.217	ENSSBOG00000021109	LARP4B	87	68.217	Saimiri_boliviensis_boliviensis
ENSHGLG00100017261	-	100	64.961	ENSSHAG00000013392	LARP4B	87	64.953	Sarcophilus_harrisii
ENSHGLG00100017261	-	100	52.102	ENSSFOG00015003256	LARP4B	81	53.040	Scleropages_formosus
ENSHGLG00100017261	-	91	51.195	ENSSMAG00000005982	-	67	73.759	Scophthalmus_maximus
ENSHGLG00100017261	-	100	51.455	ENSSDUG00000006704	LARP4B	85	51.761	Seriola_dumerili
ENSHGLG00100017261	-	100	51.864	ENSSLDG00000020660	LARP4B	84	51.691	Seriola_lalandi_dorsalis
ENSHGLG00100017261	-	58	85.849	ENSSARG00000001243	-	65	85.849	Sorex_araneus
ENSHGLG00100017261	-	100	64.229	ENSSPUG00000002102	-	87	64.229	Sphenodon_punctatus
ENSHGLG00100017261	-	79	68.938	ENSSPUG00000013734	-	78	68.938	Sphenodon_punctatus
ENSHGLG00100017261	-	100	52.202	ENSSPAG00000014628	LARP4B	84	52.365	Stegastes_partitus
ENSHGLG00100017261	-	100	69.876	ENSSSCG00000011162	LARP4B	98	71.769	Sus_scrofa
ENSHGLG00100017261	-	100	63.833	ENSTGUG00000000811	-	88	63.833	Taeniopygia_guttata
ENSHGLG00100017261	-	100	49.173	ENSTNIG00000007991	LARP4B	86	49.754	Tetraodon_nigroviridis
ENSHGLG00100017261	-	100	49.396	ENSTNIG00000004571	-	85	50.226	Tetraodon_nigroviridis
ENSHGLG00100017261	-	89	75.506	ENSTTRG00000011151	LARP4B	79	75.506	Tursiops_truncatus
ENSHGLG00100017261	-	99	72.274	ENSUAMG00000016461	LARP4B	94	72.274	Ursus_americanus
ENSHGLG00100017261	-	100	72.000	ENSUMAG00000016127	LARP4B	89	72.000	Ursus_maritimus
ENSHGLG00100017261	-	60	83.616	ENSVPAG00000000128	-	73	83.616	Vicugna_pacos
ENSHGLG00100017261	-	100	71.538	ENSVVUG00000008641	LARP4B	99	68.788	Vulpes_vulpes
ENSHGLG00100017261	-	100	60.462	ENSXETG00000016882	larp4b	88	60.462	Xenopus_tropicalis
ENSHGLG00100017261	-	100	50.479	ENSXCOG00000019952	LARP4B	63	83.761	Xiphophorus_couchianus
ENSHGLG00100017261	-	100	51.302	ENSXMAG00000021533	LARP4B	85	51.149	Xiphophorus_maculatus