EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100017301 (Gene tree)
Gene ID: -
Gene Symbol: GTSF1
Alias: FAM112B|FLJ32942
Full Name: gametocyte specific factor 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 19527 bases
Position: chrJH170425.1:222566-242092
Accession: 101716163
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100023555	zf-U11-48K	PF05253.12	4.3e-21	1	2
ENSHGLP00100023555	zf-U11-48K	PF05253.12	4.3e-21	2	2
ENSHGLP00100023556	zf-U11-48K	PF05253.12	6.1e-21	1	2
ENSHGLP00100023556	zf-U11-48K	PF05253.12	6.1e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100023797	-	2208	-	ENSHGLP00100023555	167 (aa)	XP_004872864	A0A0P6JMQ6
ENSHGLT00100023798	-	564	-	ENSHGLP00100023556	187 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100017301's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100017301's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100017301	GTSF1	56	33.673	ENSHGLG00100012359	-	64	33.673

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100017301	GTSF1	100	89.222	ENSG00000170627	GTSF1	100	89.222	Homo_sapiens
ENSHGLG00100017301	GTSF1	88	44.295	ENSAPOG00000022724	-	95	44.295	Acanthochromis_polyacanthus
ENSHGLG00100017301	GTSF1	97	94.444	ENSAMEG00000000939	GTSF1	96	94.444	Ailuropoda_melanoleuca
ENSHGLG00100017301	GTSF1	88	44.295	ENSAOCG00000022214	-	72	42.675	Amphiprion_ocellaris
ENSHGLG00100017301	GTSF1	75	60.317	ENSAPLG00000004814	GTSF1	93	60.317	Anas_platyrhynchos
ENSHGLG00100017301	GTSF1	69	49.138	ENSACAG00000029590	-	95	49.138	Anolis_carolinensis
ENSHGLG00100017301	GTSF1	97	61.728	ENSACAG00000014260	-	95	60.976	Anolis_carolinensis
ENSHGLG00100017301	GTSF1	100	89.222	ENSANAG00000024529	GTSF1	100	89.222	Aotus_nancymaae
ENSHGLG00100017301	GTSF1	100	92.216	ENSBTAG00000018085	GTSF1	100	92.216	Bos_taurus
ENSHGLG00100017301	GTSF1	100	89.222	ENSCJAG00000018968	-	100	89.222	Callithrix_jacchus
ENSHGLG00100017301	GTSF1	100	83.832	ENSCJAG00000039915	-	99	79.570	Callithrix_jacchus
ENSHGLG00100017301	GTSF1	100	94.012	ENSCAFG00000006465	-	100	94.012	Canis_familiaris
ENSHGLG00100017301	GTSF1	100	94.012	ENSCAFG00020020373	-	94	93.293	Canis_lupus_dingo
ENSHGLG00100017301	GTSF1	98	91.411	ENSCHIG00000012215	-	95	91.411	Capra_hircus
ENSHGLG00100017301	GTSF1	100	72.455	ENSTSYG00000035266	-	100	72.455	Carlito_syrichta
ENSHGLG00100017301	GTSF1	99	90.361	ENSTSYG00000004679	-	100	90.361	Carlito_syrichta
ENSHGLG00100017301	GTSF1	100	95.210	ENSCPOG00000008743	GTSF1	100	95.210	Cavia_porcellus
ENSHGLG00100017301	GTSF1	96	67.702	ENSCCAG00000032808	GTSF1	100	67.702	Cebus_capucinus
ENSHGLG00100017301	GTSF1	100	89.222	ENSCATG00000036328	GTSF1	100	89.222	Cercocebus_atys
ENSHGLG00100017301	GTSF1	100	94.611	ENSCLAG00000012811	GTSF1	100	94.611	Chinchilla_lanigera
ENSHGLG00100017301	GTSF1	94	89.172	ENSCSAG00000005394	GTSF1	99	89.172	Chlorocebus_sabaeus
ENSHGLG00100017301	GTSF1	100	92.216	ENSCHOG00000001659	GTSF1	100	92.216	Choloepus_hoffmanni
ENSHGLG00100017301	GTSF1	95	58.750	ENSCPBG00000024905	-	86	58.750	Chrysemys_picta_bellii
ENSHGLG00100017301	GTSF1	99	69.277	ENSCPBG00000005134	-	80	63.978	Chrysemys_picta_bellii
ENSHGLG00100017301	GTSF1	100	83.832	ENSCANG00000031776	-	100	83.832	Colobus_angolensis_palliatus
ENSHGLG00100017301	GTSF1	100	88.024	ENSCANG00000033118	GTSF1	100	88.024	Colobus_angolensis_palliatus
ENSHGLG00100017301	GTSF1	100	95.210	ENSCGRG00001013814	Gtsf1	100	95.210	Cricetulus_griseus_chok1gshd
ENSHGLG00100017301	GTSF1	100	95.210	ENSCGRG00000007733	Gtsf1	100	95.210	Cricetulus_griseus_crigri
ENSHGLG00100017301	GTSF1	94	91.720	ENSDNOG00000001438	-	81	91.720	Dasypus_novemcinctus
ENSHGLG00100017301	GTSF1	100	95.210	ENSDORG00000003228	Gtsf1	100	95.210	Dipodomys_ordii
ENSHGLG00100017301	GTSF1	100	90.419	ENSETEG00000009310	GTSF1	100	90.419	Echinops_telfairi
ENSHGLG00100017301	GTSF1	100	94.012	ENSEASG00005010260	GTSF1	95	90.960	Equus_asinus_asinus
ENSHGLG00100017301	GTSF1	100	94.012	ENSECAG00000013618	GTSF1	100	94.012	Equus_caballus
ENSHGLG00100017301	GTSF1	100	94.012	ENSEEUG00000005185	GTSF1	100	94.012	Erinaceus_europaeus
ENSHGLG00100017301	GTSF1	100	94.012	ENSFCAG00000010156	-	100	94.012	Felis_catus
ENSHGLG00100017301	GTSF1	100	65.868	ENSFCAG00000023672	-	95	64.407	Felis_catus
ENSHGLG00100017301	GTSF1	75	53.175	ENSFALG00000007613	-	100	53.175	Ficedula_albicollis
ENSHGLG00100017301	GTSF1	100	90.909	ENSFDAG00000009383	GTSF1	100	90.909	Fukomys_damarensis
ENSHGLG00100017301	GTSF1	92	56.494	ENSGALG00000001109	GTSF1	95	56.494	Gallus_gallus
ENSHGLG00100017301	GTSF1	88	48.980	ENSGACG00000010783	-	80	48.980	Gasterosteus_aculeatus
ENSHGLG00100017301	GTSF1	66	44.144	ENSGAGG00000018216	-	89	44.144	Gopherus_agassizii
ENSHGLG00100017301	GTSF1	62	51.887	ENSGAGG00000016342	-	99	51.887	Gopherus_agassizii
ENSHGLG00100017301	GTSF1	99	61.078	ENSGAGG00000011062	GTSF1	86	61.078	Gopherus_agassizii
ENSHGLG00100017301	GTSF1	100	89.222	ENSGGOG00000016063	GTSF1	100	89.222	Gorilla_gorilla
ENSHGLG00100017301	GTSF1	100	100.000	ENSHGLG00000002436	GTSF1	100	100.000	Heterocephalus_glaber_female
ENSHGLG00100017301	GTSF1	93	49.045	ENSIPUG00000002483	-	81	49.045	Ictalurus_punctatus
ENSHGLG00100017301	GTSF1	100	95.808	ENSSTOG00000025170	GTSF1	100	95.808	Ictidomys_tridecemlineatus
ENSHGLG00100017301	GTSF1	100	89.820	ENSJJAG00000003323	-	100	89.820	Jaculus_jaculus
ENSHGLG00100017301	GTSF1	100	83.832	ENSJJAG00000017442	-	100	83.832	Jaculus_jaculus
ENSHGLG00100017301	GTSF1	88	49.324	ENSKMAG00000006038	-	80	49.324	Kryptolebias_marmoratus
ENSHGLG00100017301	GTSF1	95	59.494	ENSLACG00000008870	GTSF1	95	53.552	Latimeria_chalumnae
ENSHGLG00100017301	GTSF1	97	94.444	ENSLAFG00000016318	GTSF1	97	94.444	Loxodonta_africana
ENSHGLG00100017301	GTSF1	100	89.222	ENSMFAG00000041178	GTSF1	100	89.222	Macaca_fascicularis
ENSHGLG00100017301	GTSF1	100	89.222	ENSMMUG00000003758	GTSF1	100	89.222	Macaca_mulatta
ENSHGLG00100017301	GTSF1	100	89.222	ENSMNEG00000036779	GTSF1	100	89.222	Macaca_nemestrina
ENSHGLG00100017301	GTSF1	100	88.623	ENSMLEG00000028375	GTSF1	100	88.623	Mandrillus_leucophaeus
ENSHGLG00100017301	GTSF1	69	62.393	ENSMGAG00000000685	GTSF1	83	62.393	Meleagris_gallopavo
ENSHGLG00100017301	GTSF1	100	71.257	ENSMAUG00000018746	Gtsf1	99	71.257	Mesocricetus_auratus
ENSHGLG00100017301	GTSF1	100	94.012	ENSMICG00000008444	-	100	94.012	Microcebus_murinus
ENSHGLG00100017301	GTSF1	100	94.611	ENSMOCG00000018889	Gtsf1	100	94.611	Microtus_ochrogaster
ENSHGLG00100017301	GTSF1	100	85.030	ENSMODG00000019422	GTSF1	100	85.030	Monodelphis_domestica
ENSHGLG00100017301	GTSF1	100	95.808	MGP_CAROLIEiJ_G0020379	Gtsf1	100	96.850	Mus_caroli
ENSHGLG00100017301	GTSF1	100	95.808	ENSMUSG00000022487	Gtsf1	100	96.850	Mus_musculus
ENSHGLG00100017301	GTSF1	100	95.210	MGP_PahariEiJ_G0020378	Gtsf1	100	96.063	Mus_pahari
ENSHGLG00100017301	GTSF1	100	95.808	MGP_SPRETEiJ_G0021272	Gtsf1	100	96.850	Mus_spretus
ENSHGLG00100017301	GTSF1	100	85.629	ENSMPUG00000019140	-	100	85.629	Mustela_putorius_furo
ENSHGLG00100017301	GTSF1	98	94.512	ENSMPUG00000005669	-	98	94.512	Mustela_putorius_furo
ENSHGLG00100017301	GTSF1	100	92.814	ENSMPUG00000019323	-	100	92.814	Mustela_putorius_furo
ENSHGLG00100017301	GTSF1	100	89.222	ENSMLUG00000026557	-	100	89.222	Myotis_lucifugus
ENSHGLG00100017301	GTSF1	100	92.216	ENSMLUG00000012961	-	100	92.216	Myotis_lucifugus
ENSHGLG00100017301	GTSF1	100	94.611	ENSNGAG00000014213	Gtsf1	100	94.611	Nannospalax_galili
ENSHGLG00100017301	GTSF1	100	88.623	ENSNLEG00000017635	GTSF1	100	88.623	Nomascus_leucogenys
ENSHGLG00100017301	GTSF1	100	74.850	ENSMEUG00000016206	GTSF1	100	74.850	Notamacropus_eugenii
ENSHGLG00100017301	GTSF1	100	67.665	ENSOPRG00000017277	GTSF1	100	67.665	Ochotona_princeps
ENSHGLG00100017301	GTSF1	100	94.012	ENSODEG00000014220	GTSF1	100	94.012	Octodon_degus
ENSHGLG00100017301	GTSF1	99	68.072	ENSOANG00000011386	GTSF1	99	68.072	Ornithorhynchus_anatinus
ENSHGLG00100017301	GTSF1	100	93.413	ENSOCUG00000024495	GTSF1	100	93.413	Oryctolagus_cuniculus
ENSHGLG00100017301	GTSF1	76	44.186	ENSORLG00015005017	-	70	49.558	Oryzias_latipes_hsok
ENSHGLG00100017301	GTSF1	95	91.824	ENSOGAG00000017227	GTSF1	94	91.824	Otolemur_garnettii
ENSHGLG00100017301	GTSF1	100	92.814	ENSOARG00000016162	GTSF1	100	92.814	Ovis_aries
ENSHGLG00100017301	GTSF1	100	89.222	ENSPPAG00000028506	GTSF1	100	89.222	Pan_paniscus
ENSHGLG00100017301	GTSF1	100	83.832	ENSPPRG00000017612	-	96	81.356	Panthera_pardus
ENSHGLG00100017301	GTSF1	100	94.012	ENSPPRG00000004344	-	100	94.012	Panthera_pardus
ENSHGLG00100017301	GTSF1	100	84.431	ENSPTIG00000010868	-	96	81.921	Panthera_tigris_altaica
ENSHGLG00100017301	GTSF1	100	94.012	ENSPTIG00000020415	-	100	94.012	Panthera_tigris_altaica
ENSHGLG00100017301	GTSF1	100	89.222	ENSPTRG00000005041	GTSF1	100	89.222	Pan_troglodytes
ENSHGLG00100017301	GTSF1	100	89.222	ENSPANG00000020579	GTSF1	100	89.222	Papio_anubis
ENSHGLG00100017301	GTSF1	98	67.879	ENSPSIG00000009968	GTSF1	84	66.279	Pelodiscus_sinensis
ENSHGLG00100017301	GTSF1	83	44.595	ENSPSIG00000009839	-	92	44.595	Pelodiscus_sinensis
ENSHGLG00100017301	GTSF1	100	95.210	ENSPEMG00000009595	Gtsf1	100	95.210	Peromyscus_maniculatus_bairdii
ENSHGLG00100017301	GTSF1	100	81.437	ENSPCIG00000006731	GTSF1	100	81.437	Phascolarctos_cinereus
ENSHGLG00100017301	GTSF1	100	89.222	ENSPPYG00000004605	GTSF1	100	89.222	Pongo_abelii
ENSHGLG00100017301	GTSF1	97	82.099	ENSPCOG00000015201	-	99	79.012	Propithecus_coquereli
ENSHGLG00100017301	GTSF1	100	93.413	ENSPCOG00000016907	-	100	93.413	Propithecus_coquereli
ENSHGLG00100017301	GTSF1	100	94.012	ENSPVAG00000000333	GTSF1	100	94.012	Pteropus_vampyrus
ENSHGLG00100017301	GTSF1	90	48.026	ENSPNAG00000005737	-	82	48.026	Pygocentrus_nattereri
ENSHGLG00100017301	GTSF1	100	95.808	ENSRNOG00000036831	Gtsf1	98	90.270	Rattus_norvegicus
ENSHGLG00100017301	GTSF1	100	88.623	ENSRBIG00000043438	-	100	88.623	Rhinopithecus_bieti
ENSHGLG00100017301	GTSF1	100	80.838	ENSRBIG00000039916	-	99	76.216	Rhinopithecus_bieti
ENSHGLG00100017301	GTSF1	100	89.222	ENSRROG00000008137	GTSF1	100	89.222	Rhinopithecus_roxellana
ENSHGLG00100017301	GTSF1	100	89.820	ENSSBOG00000029460	GTSF1	100	89.820	Saimiri_boliviensis_boliviensis
ENSHGLG00100017301	GTSF1	100	85.030	ENSSHAG00000011633	GTSF1	100	85.030	Sarcophilus_harrisii
ENSHGLG00100017301	GTSF1	78	93.846	ENSSARG00000004928	GTSF1	78	93.846	Sorex_araneus
ENSHGLG00100017301	GTSF1	98	50.307	ENSSPUG00000010064	GTSF1	93	70.000	Sphenodon_punctatus
ENSHGLG00100017301	GTSF1	100	93.413	ENSSSCG00000026333	GTSF1	100	93.413	Sus_scrofa
ENSHGLG00100017301	GTSF1	76	55.469	ENSTGUG00000002008	-	100	55.469	Taeniopygia_guttata
ENSHGLG00100017301	GTSF1	96	91.925	ENSTBEG00000006154	GTSF1	100	91.925	Tupaia_belangeri
ENSHGLG00100017301	GTSF1	100	91.018	ENSTTRG00000004470	GTSF1	100	91.018	Tursiops_truncatus
ENSHGLG00100017301	GTSF1	100	94.611	ENSUAMG00000021669	GTSF1	94	93.902	Ursus_americanus
ENSHGLG00100017301	GTSF1	100	94.611	ENSUMAG00000011279	GTSF1	100	94.611	Ursus_maritimus
ENSHGLG00100017301	GTSF1	100	92.216	ENSVPAG00000007016	GTSF1	100	92.216	Vicugna_pacos
ENSHGLG00100017301	GTSF1	100	94.012	ENSVVUG00000023687	-	89	92.090	Vulpes_vulpes
ENSHGLG00100017301	GTSF1	96	64.596	ENSXETG00000033546	gtsf1	71	64.596	Xenopus_tropicalis