EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100017302 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 1135 bases
Position: chrJH170216.1:2991671-2992805
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100023557	zf-CCCH	PF00642.24	1.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100023799	-	513	-	ENSHGLP00100023557	170 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100017302's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100017302's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100017302	-	79	63.068	ENSHGLG00100009215	-	100	65.909

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100017302	-	100	68.720	ENSG00000160917	CPSF4	100	70.616	Homo_sapiens
ENSHGLG00100017302	-	100	53.903	ENSAMEG00000006252	CPSF4	78	66.507	Ailuropoda_melanoleuca
ENSHGLG00100017302	-	100	57.261	ENSACIG00000009248	cpsf4	100	58.091	Amphilophus_citrinellus
ENSHGLG00100017302	-	89	65.263	ENSAOCG00000019616	cpsf4	67	64.407	Amphiprion_ocellaris
ENSHGLG00100017302	-	89	65.263	ENSAPEG00000011679	cpsf4	67	64.407	Amphiprion_percula
ENSHGLG00100017302	-	100	55.870	ENSATEG00000007010	cpsf4	100	54.656	Anabas_testudineus
ENSHGLG00100017302	-	100	51.301	ENSACAG00000012941	CPSF4	59	66.102	Anolis_carolinensis
ENSHGLG00100017302	-	100	68.720	ENSANAG00000021360	CPSF4	100	70.616	Aotus_nancymaae
ENSHGLG00100017302	-	100	61.333	ENSACLG00000010374	cpsf4	100	61.333	Astatotilapia_calliptera
ENSHGLG00100017302	-	100	69.652	ENSAMXG00000031647	cpsf4	100	69.652	Astyanax_mexicanus
ENSHGLG00100017302	-	100	60.082	ENSBTAG00000002090	CPSF4	100	62.140	Bos_taurus
ENSHGLG00100017302	-	100	68.720	ENSCJAG00000015826	CPSF4	100	70.616	Callithrix_jacchus
ENSHGLG00100017302	-	100	71.698	ENSCAFG00000015036	CPSF4	100	71.698	Canis_familiaris
ENSHGLG00100017302	-	100	60.664	ENSCAFG00020014462	CPSF4	100	63.033	Canis_lupus_dingo
ENSHGLG00100017302	-	100	68.720	ENSCHIG00000014313	CPSF4	100	71.090	Capra_hircus
ENSHGLG00100017302	-	100	65.714	ENSTSYG00000014604	-	100	65.714	Carlito_syrichta
ENSHGLG00100017302	-	100	68.246	ENSTSYG00000005712	-	100	70.616	Carlito_syrichta
ENSHGLG00100017302	-	81	63.483	ENSTSYG00000008195	-	100	63.483	Carlito_syrichta
ENSHGLG00100017302	-	70	60.625	ENSCAPG00000013881	CPSF4	82	63.750	Cavia_aperea
ENSHGLG00100017302	-	100	68.720	ENSCPOG00000001783	CPSF4	100	71.090	Cavia_porcellus
ENSHGLG00100017302	-	100	68.720	ENSCCAG00000028291	CPSF4	100	70.616	Cebus_capucinus
ENSHGLG00100017302	-	100	68.720	ENSCATG00000038440	CPSF4	100	70.616	Cercocebus_atys
ENSHGLG00100017302	-	100	68.720	ENSCLAG00000007050	CPSF4	100	70.616	Chinchilla_lanigera
ENSHGLG00100017302	-	100	53.903	ENSCSAG00000017795	CPSF4	66	70.056	Chlorocebus_sabaeus
ENSHGLG00100017302	-	69	43.981	ENSCPBG00000020869	CPSF4	57	54.032	Chrysemys_picta_bellii
ENSHGLG00100017302	-	74	53.939	ENSCPBG00000010269	-	100	53.614	Chrysemys_picta_bellii
ENSHGLG00100017302	-	79	51.149	ENSCING00000021080	-	66	51.149	Ciona_intestinalis
ENSHGLG00100017302	-	82	51.685	ENSCSAVG00000011469	-	60	51.445	Ciona_savignyi
ENSHGLG00100017302	-	100	68.720	ENSCANG00000019384	CPSF4	100	70.616	Colobus_angolensis_palliatus
ENSHGLG00100017302	-	100	68.720	ENSCGRG00001024184	Cpsf4	100	71.090	Cricetulus_griseus_chok1gshd
ENSHGLG00100017302	-	100	68.720	ENSCGRG00000013892	Cpsf4	100	71.090	Cricetulus_griseus_crigri
ENSHGLG00100017302	-	100	64.929	ENSCSEG00000019055	cpsf4	100	64.929	Cynoglossus_semilaevis
ENSHGLG00100017302	-	93	62.944	ENSCVAG00000016528	cpsf4	74	62.944	Cyprinodon_variegatus
ENSHGLG00100017302	-	84	66.484	ENSDARG00000020217	cpsf4	65	65.537	Danio_rerio
ENSHGLG00100017302	-	100	53.903	ENSDNOG00000006344	CPSF4	78	66.507	Dasypus_novemcinctus
ENSHGLG00100017302	-	69	43.981	ENSDORG00000000742	Cpsf4	72	52.564	Dipodomys_ordii
ENSHGLG00100017302	-	78	48.276	FBgn0015621	Clp	59	48.276	Drosophila_melanogaster
ENSHGLG00100017302	-	74	67.879	ENSETEG00000002608	CPSF4	61	67.879	Echinops_telfairi
ENSHGLG00100017302	-	99	46.414	ENSEBUG00000012552	cpsf4	98	45.570	Eptatretus_burgeri
ENSHGLG00100017302	-	100	62.705	ENSEASG00005002487	CPSF4	100	62.705	Equus_asinus_asinus
ENSHGLG00100017302	-	100	68.720	ENSECAG00000007525	CPSF4	100	71.090	Equus_caballus
ENSHGLG00100017302	-	86	66.129	ENSELUG00000011481	cpsf4	65	64.972	Esox_lucius
ENSHGLG00100017302	-	100	68.720	ENSFCAG00000015070	CPSF4	100	71.090	Felis_catus
ENSHGLG00100017302	-	100	59.259	ENSFALG00000013799	CPSF4	100	59.259	Ficedula_albicollis
ENSHGLG00100017302	-	74	39.306	ENSFALG00000012906	-	100	39.306	Ficedula_albicollis
ENSHGLG00100017302	-	85	64.865	ENSFDAG00000014092	CPSF4	100	67.568	Fukomys_damarensis
ENSHGLG00100017302	-	93	63.959	ENSFHEG00000010880	cpsf4	74	63.959	Fundulus_heteroclitus
ENSHGLG00100017302	-	100	52.326	ENSGMOG00000002330	cpsf4	69	62.570	Gadus_morhua
ENSHGLG00100017302	-	81	35.252	ENSGALG00000004441	-	55	35.252	Gallus_gallus
ENSHGLG00100017302	-	100	59.671	ENSGALG00000004714	CPSF4	100	59.671	Gallus_gallus
ENSHGLG00100017302	-	89	64.211	ENSGAFG00000010580	cpsf4	67	63.277	Gambusia_affinis
ENSHGLG00100017302	-	100	52.756	ENSGACG00000007792	cpsf4	100	52.756	Gasterosteus_aculeatus
ENSHGLG00100017302	-	100	52.788	ENSGAGG00000021835	CPSF4	66	68.362	Gopherus_agassizii
ENSHGLG00100017302	-	84	51.648	ENSGAGG00000020579	-	92	53.333	Gopherus_agassizii
ENSHGLG00100017302	-	100	68.720	ENSGGOG00000015131	CPSF4	100	70.616	Gorilla_gorilla
ENSHGLG00100017302	-	89	64.211	ENSHBUG00000013699	cpsf4	67	63.842	Haplochromis_burtoni
ENSHGLG00100017302	-	100	68.720	ENSHGLG00000017150	CPSF4	100	71.090	Heterocephalus_glaber_female
ENSHGLG00100017302	-	100	51.698	ENSHCOG00000004397	cpsf4	67	63.842	Hippocampus_comes
ENSHGLG00100017302	-	84	65.934	ENSIPUG00000017147	cpsf4	75	58.738	Ictalurus_punctatus
ENSHGLG00100017302	-	100	68.720	ENSSTOG00000001688	CPSF4	100	71.090	Ictidomys_tridecemlineatus
ENSHGLG00100017302	-	100	68.720	ENSJJAG00000019426	Cpsf4	100	70.616	Jaculus_jaculus
ENSHGLG00100017302	-	89	62.632	ENSKMAG00000015642	cpsf4	72	62.632	Kryptolebias_marmoratus
ENSHGLG00100017302	-	89	66.842	ENSLACG00000010938	CPSF4	66	67.232	Latimeria_chalumnae
ENSHGLG00100017302	-	100	44.898	ENSLACG00000018470	-	70	55.814	Latimeria_chalumnae
ENSHGLG00100017302	-	81	66.102	ENSLOCG00000004814	cpsf4	66	66.102	Lepisosteus_oculatus
ENSHGLG00100017302	-	100	53.532	ENSLAFG00000000159	CPSF4	100	63.975	Loxodonta_africana
ENSHGLG00100017302	-	100	68.720	ENSMFAG00000001462	CPSF4	100	70.616	Macaca_fascicularis
ENSHGLG00100017302	-	100	68.720	ENSMMUG00000019191	CPSF4	100	70.616	Macaca_mulatta
ENSHGLG00100017302	-	100	68.720	ENSMNEG00000032306	CPSF4	100	70.616	Macaca_nemestrina
ENSHGLG00100017302	-	100	68.720	ENSMLEG00000034721	CPSF4	100	70.616	Mandrillus_leucophaeus
ENSHGLG00100017302	-	99	57.692	ENSMAMG00000006244	cpsf4	67	64.407	Mastacembelus_armatus
ENSHGLG00100017302	-	89	64.211	ENSMZEG00005007515	cpsf4	67	63.842	Maylandia_zebra
ENSHGLG00100017302	-	80	55.024	ENSMGAG00000004235	CPSF4	100	55.024	Meleagris_gallopavo
ENSHGLG00100017302	-	100	68.720	ENSMAUG00000021253	Cpsf4	100	71.090	Mesocricetus_auratus
ENSHGLG00100017302	-	100	68.720	ENSMICG00000017429	CPSF4	100	70.616	Microcebus_murinus
ENSHGLG00100017302	-	100	68.720	ENSMOCG00000014901	Cpsf4	100	71.090	Microtus_ochrogaster
ENSHGLG00100017302	-	100	68.657	ENSMMOG00000001813	cpsf4	100	68.657	Mola_mola
ENSHGLG00100017302	-	100	53.532	ENSMODG00000001367	CPSF4	78	65.550	Monodelphis_domestica
ENSHGLG00100017302	-	85	65.217	ENSMALG00000012611	cpsf4	67	63.842	Monopterus_albus
ENSHGLG00100017302	-	100	68.720	MGP_CAROLIEiJ_G0028012	Cpsf4	100	71.090	Mus_caroli
ENSHGLG00100017302	-	100	68.720	ENSMUSG00000029625	Cpsf4	100	71.090	Mus_musculus
ENSHGLG00100017302	-	100	68.720	MGP_PahariEiJ_G0024581	Cpsf4	100	71.090	Mus_pahari
ENSHGLG00100017302	-	100	68.720	MGP_SPRETEiJ_G0029013	Cpsf4	100	70.616	Mus_spretus
ENSHGLG00100017302	-	100	53.903	ENSMPUG00000016508	CPSF4	78	66.507	Mustela_putorius_furo
ENSHGLG00100017302	-	80	54.545	ENSMLUG00000010980	CPSF4	100	56.459	Myotis_lucifugus
ENSHGLG00100017302	-	100	68.720	ENSNGAG00000001567	Cpsf4	100	71.090	Nannospalax_galili
ENSHGLG00100017302	-	75	62.651	ENSNBRG00000003943	cpsf4	62	62.092	Neolamprologus_brichardi
ENSHGLG00100017302	-	100	68.720	ENSNLEG00000011074	CPSF4	100	70.616	Nomascus_leucogenys
ENSHGLG00100017302	-	100	53.532	ENSMEUG00000006955	CPSF4	78	65.550	Notamacropus_eugenii
ENSHGLG00100017302	-	100	53.532	ENSOPRG00000013663	CPSF4	78	65.550	Ochotona_princeps
ENSHGLG00100017302	-	100	68.720	ENSODEG00000011181	-	100	71.090	Octodon_degus
ENSHGLG00100017302	-	98	54.976	ENSODEG00000018283	-	89	54.976	Octodon_degus
ENSHGLG00100017302	-	100	48.988	ENSODEG00000009779	-	100	49.784	Octodon_degus
ENSHGLG00100017302	-	89	64.211	ENSONIG00000008495	cpsf4	67	63.842	Oreochromis_niloticus
ENSHGLG00100017302	-	82	44.693	ENSOANG00000009568	-	63	44.944	Ornithorhynchus_anatinus
ENSHGLG00100017302	-	71	64.151	ENSOANG00000007729	CPSF4	61	63.636	Ornithorhynchus_anatinus
ENSHGLG00100017302	-	93	62.944	ENSORLG00000022798	cpsf4	67	64.407	Oryzias_latipes
ENSHGLG00100017302	-	93	62.944	ENSORLG00020008548	cpsf4	67	64.407	Oryzias_latipes_hni
ENSHGLG00100017302	-	93	62.437	ENSORLG00015019575	cpsf4	67	63.842	Oryzias_latipes_hsok
ENSHGLG00100017302	-	100	64.423	ENSOMEG00000005176	cpsf4	100	64.423	Oryzias_melastigma
ENSHGLG00100017302	-	100	53.903	ENSOGAG00000010884	CPSF4	66	70.056	Otolemur_garnettii
ENSHGLG00100017302	-	92	55.838	ENSOARG00000018668	CPSF4	61	61.446	Ovis_aries
ENSHGLG00100017302	-	100	68.720	ENSPPAG00000043355	CPSF4	100	70.616	Pan_paniscus
ENSHGLG00100017302	-	100	68.720	ENSPPRG00000003134	CPSF4	100	71.090	Panthera_pardus
ENSHGLG00100017302	-	84	64.130	ENSPTIG00000005604	CPSF4	87	67.935	Panthera_tigris_altaica
ENSHGLG00100017302	-	100	68.720	ENSPTRG00000019453	CPSF4	100	70.616	Pan_troglodytes
ENSHGLG00100017302	-	100	68.720	ENSPANG00000023123	CPSF4	100	70.616	Papio_anubis
ENSHGLG00100017302	-	86	66.129	ENSPKIG00000014278	cpsf4	65	66.102	Paramormyrops_kingsleyae
ENSHGLG00100017302	-	69	43.519	ENSPSIG00000011229	CPSF4	57	54.032	Pelodiscus_sinensis
ENSHGLG00100017302	-	70	40.104	ENSPSIG00000018198	-	64	49.180	Pelodiscus_sinensis
ENSHGLG00100017302	-	100	52.521	ENSPMGG00000017735	cpsf4	100	51.681	Periophthalmus_magnuspinnatus
ENSHGLG00100017302	-	100	68.720	ENSPEMG00000004508	Cpsf4	100	71.090	Peromyscus_maniculatus_bairdii
ENSHGLG00100017302	-	100	53.532	ENSPCIG00000024776	CPSF4	78	65.550	Phascolarctos_cinereus
ENSHGLG00100017302	-	89	64.211	ENSPFOG00000014912	cpsf4	67	63.277	Poecilia_formosa
ENSHGLG00100017302	-	100	49.187	ENSPLAG00000009599	cpsf4	100	48.780	Poecilia_latipinna
ENSHGLG00100017302	-	89	64.211	ENSPMEG00000009790	cpsf4	67	63.277	Poecilia_mexicana
ENSHGLG00100017302	-	89	63.158	ENSPREG00000018166	cpsf4	66	63.006	Poecilia_reticulata
ENSHGLG00100017302	-	79	48.927	ENSPPYG00000017378	CPSF4	61	65.957	Pongo_abelii
ENSHGLG00100017302	-	100	52.788	ENSPCAG00000001892	CPSF4	78	65.072	Procavia_capensis
ENSHGLG00100017302	-	100	68.720	ENSPCOG00000012771	CPSF4	100	71.090	Propithecus_coquereli
ENSHGLG00100017302	-	100	47.212	ENSPVAG00000007531	CPSF4	78	54.545	Pteropus_vampyrus
ENSHGLG00100017302	-	89	64.211	ENSPNYG00000018559	cpsf4	67	63.842	Pundamilia_nyererei
ENSHGLG00100017302	-	84	67.582	ENSPNAG00000003736	cpsf4	66	66.667	Pygocentrus_nattereri
ENSHGLG00100017302	-	100	68.720	ENSRNOG00000000985	Cpsf4	100	71.090	Rattus_norvegicus
ENSHGLG00100017302	-	79	64.205	ENSRBIG00000033886	CPSF4	100	66.477	Rhinopithecus_bieti
ENSHGLG00100017302	-	100	68.720	ENSRROG00000040431	CPSF4	100	70.616	Rhinopithecus_roxellana
ENSHGLG00100017302	-	100	68.720	ENSSBOG00000020493	CPSF4	100	70.616	Saimiri_boliviensis_boliviensis
ENSHGLG00100017302	-	100	53.532	ENSSHAG00000011533	CPSF4	78	65.550	Sarcophilus_harrisii
ENSHGLG00100017302	-	89	66.316	ENSSFOG00015007883	cpsf4	64	66.667	Scleropages_formosus
ENSHGLG00100017302	-	100	55.738	ENSSMAG00000006374	cpsf4	100	55.328	Scophthalmus_maximus
ENSHGLG00100017302	-	89	64.737	ENSSDUG00000018887	cpsf4	67	63.842	Seriola_dumerili
ENSHGLG00100017302	-	89	64.737	ENSSLDG00000019078	cpsf4	67	63.842	Seriola_lalandi_dorsalis
ENSHGLG00100017302	-	79	48.291	ENSSARG00000012416	CPSF4	61	64.789	Sorex_araneus
ENSHGLG00100017302	-	81	52.273	ENSSPUG00000014803	-	78	52.273	Sphenodon_punctatus
ENSHGLG00100017302	-	91	66.839	ENSSPUG00000003549	CPSF4	66	67.232	Sphenodon_punctatus
ENSHGLG00100017302	-	100	57.917	ENSSPAG00000006174	cpsf4	100	57.917	Stegastes_partitus
ENSHGLG00100017302	-	100	62.295	ENSSSCG00000026896	CPSF4	100	62.295	Sus_scrofa
ENSHGLG00100017302	-	100	58.776	ENSTGUG00000007552	CPSF4	100	58.776	Taeniopygia_guttata
ENSHGLG00100017302	-	93	62.437	ENSTRUG00000024220	cpsf4	67	64.407	Takifugu_rubripes
ENSHGLG00100017302	-	93	62.944	ENSTNIG00000006265	cpsf4	67	64.407	Tetraodon_nigroviridis
ENSHGLG00100017302	-	54	61.417	ENSTBEG00000011406	CPSF4	55	57.937	Tupaia_belangeri
ENSHGLG00100017302	-	81	70.056	ENSTTRG00000003007	CPSF4	66	70.056	Tursiops_truncatus
ENSHGLG00100017302	-	81	70.056	ENSUAMG00000008051	CPSF4	68	70.056	Ursus_americanus
ENSHGLG00100017302	-	100	60.082	ENSUMAG00000009474	CPSF4	100	62.140	Ursus_maritimus
ENSHGLG00100017302	-	100	62.705	ENSVVUG00000008824	CPSF4	100	62.705	Vulpes_vulpes
ENSHGLG00100017302	-	100	49.462	ENSXETG00000009892	cpsf4	67	62.567	Xenopus_tropicalis
ENSHGLG00100017302	-	88	50.262	ENSXETG00000004641	cpsf4l	66	50.847	Xenopus_tropicalis
ENSHGLG00100017302	-	100	63.507	ENSXCOG00000016040	cpsf4	100	63.507	Xiphophorus_couchianus
ENSHGLG00100017302	-	89	64.211	ENSXMAG00000024670	cpsf4	67	63.277	Xiphophorus_maculatus