EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00100018074 (Gene tree)
Gene ID: -
Gene Symbol: GPATCH1
Alias: ECGP|FLJ10206|FLJ38686|GPATC1
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 37399 bases
Position: chrJH167046.1:651145-688543
Accession: 24658
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100024613	DUF1604	PF07713.13	9e-36	1	1
ENSHGLP00100024612	DUF1604	PF07713.13	9.5e-36	1	1
ENSHGLP00100024613	G-patch	PF01585.23	1.9e-07	1	1
ENSHGLP00100024612	G-patch	PF01585.23	1.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100024866	GPATCH1-202	2691	-	ENSHGLP00100024613	896 (aa)	-	-
ENSHGLT00100024865	GPATCH1-201	3027	-	ENSHGLP00100024612	929 (aa)	-	UPI00034F629F

Gene Model

Click here to download ENSHGLG00100018074's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100018074's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100018074	GPATCH1	100	85.134	ENSG00000076650	GPATCH1	100	84.813	Homo_sapiens
ENSHGLG00100018074	GPATCH1	100	85.118	ENSAMEG00000015575	GPATCH1	100	84.690	Ailuropoda_melanoleuca
ENSHGLG00100018074	GPATCH1	81	68.627	ENSAOCG00000006668	gpatch1	77	67.956	Amphiprion_ocellaris
ENSHGLG00100018074	GPATCH1	81	54.616	ENSAPEG00000000026	gpatch1	82	54.843	Amphiprion_percula
ENSHGLG00100018074	GPATCH1	81	52.598	ENSATEG00000014494	gpatch1	90	50.343	Anabas_testudineus
ENSHGLG00100018074	GPATCH1	92	58.493	ENSAPLG00000007584	GPATCH1	96	60.484	Anas_platyrhynchos
ENSHGLG00100018074	GPATCH1	100	83.316	ENSANAG00000027002	GPATCH1	100	83.209	Aotus_nancymaae
ENSHGLG00100018074	GPATCH1	81	54.188	ENSACLG00000024740	gpatch1	81	54.037	Astatotilapia_calliptera
ENSHGLG00100018074	GPATCH1	91	50.647	ENSAMXG00000020177	gpatch1	88	53.398	Astyanax_mexicanus
ENSHGLG00100018074	GPATCH1	91	83.784	ENSBTAG00000000721	GPATCH1	100	83.512	Bos_taurus
ENSHGLG00100018074	GPATCH1	68	31.467	WBGene00011109	R07E5.1	68	31.611	Caenorhabditis_elegans
ENSHGLG00100018074	GPATCH1	100	82.995	ENSCJAG00000000684	GPATCH1	100	82.995	Callithrix_jacchus
ENSHGLG00100018074	GPATCH1	100	84.920	ENSCAFG00000007457	GPATCH1	84	84.385	Canis_familiaris
ENSHGLG00100018074	GPATCH1	94	84.817	ENSCAFG00020019731	GPATCH1	91	84.291	Canis_lupus_dingo
ENSHGLG00100018074	GPATCH1	99	84.365	ENSCHIG00000019626	GPATCH1	100	83.940	Capra_hircus
ENSHGLG00100018074	GPATCH1	100	79.299	ENSCAPG00000008827	GPATCH1	100	82.838	Cavia_aperea
ENSHGLG00100018074	GPATCH1	100	85.638	ENSCPOG00000024477	GPATCH1	100	86.174	Cavia_porcellus
ENSHGLG00100018074	GPATCH1	100	82.674	ENSCCAG00000024676	GPATCH1	100	83.102	Cebus_capucinus
ENSHGLG00100018074	GPATCH1	100	84.706	ENSCATG00000043637	GPATCH1	100	84.385	Cercocebus_atys
ENSHGLG00100018074	GPATCH1	99	82.478	ENSCLAG00000003395	-	99	85.987	Chinchilla_lanigera
ENSHGLG00100018074	GPATCH1	100	82.585	ENSCSAG00000004743	GPATCH1	100	82.265	Chlorocebus_sabaeus
ENSHGLG00100018074	GPATCH1	88	89.767	ENSCHOG00000012865	GPATCH1	92	89.767	Choloepus_hoffmanni
ENSHGLG00100018074	GPATCH1	81	65.536	ENSCPBG00000000666	GPATCH1	95	67.150	Chrysemys_picta_bellii
ENSHGLG00100018074	GPATCH1	92	32.621	ENSCING00000012518	-	98	33.447	Ciona_intestinalis
ENSHGLG00100018074	GPATCH1	90	79.657	ENSCANG00000012540	GPATCH1	100	78.922	Colobus_angolensis_palliatus
ENSHGLG00100018074	GPATCH1	100	76.754	ENSCGRG00001016736	Gpatch1	100	79.868	Cricetulus_griseus_chok1gshd
ENSHGLG00100018074	GPATCH1	96	64.904	ENSCGRG00000005069	Gpatch1	91	66.981	Cricetulus_griseus_crigri
ENSHGLG00100018074	GPATCH1	78	49.889	ENSCSEG00000019456	-	84	61.468	Cynoglossus_semilaevis
ENSHGLG00100018074	GPATCH1	90	49.778	ENSDARG00000033418	gpatch1	92	51.050	Danio_rerio
ENSHGLG00100018074	GPATCH1	91	83.705	ENSDNOG00000005291	GPATCH1	95	83.353	Dasypus_novemcinctus
ENSHGLG00100018074	GPATCH1	94	77.854	ENSDORG00000012546	Gpatch1	95	77.491	Dipodomys_ordii
ENSHGLG00100018074	GPATCH1	82	32.143	FBgn0036386	CG8833	67	33.575	Drosophila_melanogaster
ENSHGLG00100018074	GPATCH1	99	73.377	ENSETEG00000003626	GPATCH1	92	73.505	Echinops_telfairi
ENSHGLG00100018074	GPATCH1	94	37.093	ENSEBUG00000011286	gpatch1	92	37.908	Eptatretus_burgeri
ENSHGLG00100018074	GPATCH1	91	84.080	ENSEASG00005021162	GPATCH1	93	85.732	Equus_asinus_asinus
ENSHGLG00100018074	GPATCH1	94	84.914	ENSECAG00000022743	GPATCH1	88	84.859	Equus_caballus
ENSHGLG00100018074	GPATCH1	77	78.431	ENSEEUG00000012925	GPATCH1	77	78.431	Erinaceus_europaeus
ENSHGLG00100018074	GPATCH1	100	83.833	ENSFCAG00000014917	GPATCH1	100	83.619	Felis_catus
ENSHGLG00100018074	GPATCH1	99	62.015	ENSFALG00000007821	GPATCH1	89	63.133	Ficedula_albicollis
ENSHGLG00100018074	GPATCH1	99	86.257	ENSFDAG00000003871	GPATCH1	100	89.732	Fukomys_damarensis
ENSHGLG00100018074	GPATCH1	80	50.580	ENSGMOG00000003830	gpatch1	95	50.580	Gadus_morhua
ENSHGLG00100018074	GPATCH1	93	62.132	ENSGALG00000004839	GPATCH1	94	63.294	Gallus_gallus
ENSHGLG00100018074	GPATCH1	81	51.229	ENSGACG00000017544	gpatch1	93	49.706	Gasterosteus_aculeatus
ENSHGLG00100018074	GPATCH1	100	63.950	ENSGAGG00000010067	GPATCH1	100	64.384	Gopherus_agassizii
ENSHGLG00100018074	GPATCH1	98	84.113	ENSGGOG00000010862	GPATCH1	100	84.396	Gorilla_gorilla
ENSHGLG00100018074	GPATCH1	81	54.662	ENSHBUG00000023462	gpatch1	82	54.364	Haplochromis_burtoni
ENSHGLG00100018074	GPATCH1	100	99.892	ENSHGLG00000009334	GPATCH1	100	99.892	Heterocephalus_glaber_female
ENSHGLG00100018074	GPATCH1	93	49.945	ENSIPUG00000014977	gpatch1	90	51.081	Ictalurus_punctatus
ENSHGLG00100018074	GPATCH1	100	84.920	ENSSTOG00000003720	GPATCH1	100	84.385	Ictidomys_tridecemlineatus
ENSHGLG00100018074	GPATCH1	91	80.819	ENSJJAG00000023765	Gpatch1	100	80.790	Jaculus_jaculus
ENSHGLG00100018074	GPATCH1	89	50.818	ENSKMAG00000017950	gpatch1	89	51.628	Kryptolebias_marmoratus
ENSHGLG00100018074	GPATCH1	90	57.177	ENSLACG00000008130	GPATCH1	90	58.475	Latimeria_chalumnae
ENSHGLG00100018074	GPATCH1	81	56.680	ENSLOCG00000001800	gpatch1	83	56.654	Lepisosteus_oculatus
ENSHGLG00100018074	GPATCH1	99	83.496	ENSLAFG00000013589	GPATCH1	100	83.084	Loxodonta_africana
ENSHGLG00100018074	GPATCH1	90	84.716	ENSMFAG00000034418	GPATCH1	95	84.360	Macaca_fascicularis
ENSHGLG00100018074	GPATCH1	100	84.295	ENSMMUG00000011790	GPATCH1	100	83.974	Macaca_mulatta
ENSHGLG00100018074	GPATCH1	100	84.064	ENSMNEG00000045084	GPATCH1	100	83.743	Macaca_nemestrina
ENSHGLG00100018074	GPATCH1	100	74.225	ENSMLEG00000043840	GPATCH1	100	73.904	Mandrillus_leucophaeus
ENSHGLG00100018074	GPATCH1	81	54.061	ENSMZEG00005001926	gpatch1	82	53.913	Maylandia_zebra
ENSHGLG00100018074	GPATCH1	90	63.244	ENSMGAG00000005775	GPATCH1	89	64.072	Meleagris_gallopavo
ENSHGLG00100018074	GPATCH1	90	76.179	ENSMICG00000004829	GPATCH1	93	75.264	Microcebus_murinus
ENSHGLG00100018074	GPATCH1	99	80.021	ENSMOCG00000000174	Gpatch1	92	80.747	Microtus_ochrogaster
ENSHGLG00100018074	GPATCH1	83	50.184	ENSMMOG00000002140	gpatch1	89	50.985	Mola_mola
ENSHGLG00100018074	GPATCH1	91	71.311	ENSMODG00000012226	GPATCH1	100	70.199	Monodelphis_domestica
ENSHGLG00100018074	GPATCH1	99	47.590	ENSMALG00000014386	gpatch1	92	49.832	Monopterus_albus
ENSHGLG00100018074	GPATCH1	100	81.906	ENSMUSG00000063808	Gpatch1	100	92.857	Mus_musculus
ENSHGLG00100018074	GPATCH1	100	81.517	MGP_PahariEiJ_G0012816	Gpatch1	100	93.878	Mus_pahari
ENSHGLG00100018074	GPATCH1	100	81.478	MGP_SPRETEiJ_G0030681	Gpatch1	100	93.878	Mus_spretus
ENSHGLG00100018074	GPATCH1	100	84.261	ENSMPUG00000007658	GPATCH1	100	83.833	Mustela_putorius_furo
ENSHGLG00100018074	GPATCH1	100	83.940	ENSMLUG00000012161	GPATCH1	100	83.298	Myotis_lucifugus
ENSHGLG00100018074	GPATCH1	100	81.692	ENSNGAG00000012455	Gpatch1	100	82.013	Nannospalax_galili
ENSHGLG00100018074	GPATCH1	100	84.706	ENSNLEG00000007659	GPATCH1	100	84.385	Nomascus_leucogenys
ENSHGLG00100018074	GPATCH1	78	66.298	ENSMEUG00000015174	GPATCH1	77	66.298	Notamacropus_eugenii
ENSHGLG00100018074	GPATCH1	99	84.673	ENSODEG00000007103	GPATCH1	99	85.102	Octodon_degus
ENSHGLG00100018074	GPATCH1	81	55.013	ENSONIG00000003302	gpatch1	90	51.364	Oreochromis_niloticus
ENSHGLG00100018074	GPATCH1	99	68.449	ENSOANG00000012732	GPATCH1	99	68.421	Ornithorhynchus_anatinus
ENSHGLG00100018074	GPATCH1	100	83.636	ENSOCUG00000015905	GPATCH1	100	83.816	Oryctolagus_cuniculus
ENSHGLG00100018074	GPATCH1	89	50.238	ENSORLG00000018706	gpatch1	87	50.356	Oryzias_latipes
ENSHGLG00100018074	GPATCH1	89	49.292	ENSOMEG00000022688	gpatch1	89	50.825	Oryzias_melastigma
ENSHGLG00100018074	GPATCH1	83	86.264	ENSOGAG00000004016	GPATCH1	98	86.136	Otolemur_garnettii
ENSHGLG00100018074	GPATCH1	90	83.886	ENSOARG00000004365	GPATCH1	99	83.603	Ovis_aries
ENSHGLG00100018074	GPATCH1	100	84.599	ENSPPAG00000020990	GPATCH1	100	84.278	Pan_paniscus
ENSHGLG00100018074	GPATCH1	100	83.833	ENSPPRG00000017245	GPATCH1	100	83.512	Panthera_pardus
ENSHGLG00100018074	GPATCH1	100	84.582	ENSPTIG00000019649	GPATCH1	100	84.368	Panthera_tigris_altaica
ENSHGLG00100018074	GPATCH1	100	84.706	ENSPTRG00000010803	GPATCH1	100	84.385	Pan_troglodytes
ENSHGLG00100018074	GPATCH1	91	84.408	ENSPANG00000012374	GPATCH1	96	84.056	Papio_anubis
ENSHGLG00100018074	GPATCH1	81	55.110	ENSPKIG00000020745	gpatch1	79	54.994	Paramormyrops_kingsleyae
ENSHGLG00100018074	GPATCH1	99	63.041	ENSPSIG00000013433	GPATCH1	99	63.474	Pelodiscus_sinensis
ENSHGLG00100018074	GPATCH1	100	80.514	ENSPEMG00000000636	Gpatch1	100	80.514	Peromyscus_maniculatus_bairdii
ENSHGLG00100018074	GPATCH1	91	72.600	ENSPCIG00000021003	GPATCH1	95	72.824	Phascolarctos_cinereus
ENSHGLG00100018074	GPATCH1	71	50.149	ENSPREG00000008264	gpatch1	88	48.022	Poecilia_reticulata
ENSHGLG00100018074	GPATCH1	100	82.139	ENSPPYG00000009824	GPATCH1	100	82.032	Pongo_abelii
ENSHGLG00100018074	GPATCH1	83	73.113	ENSPCAG00000005931	GPATCH1	93	74.405	Procavia_capensis
ENSHGLG00100018074	GPATCH1	91	80.924	ENSPCOG00000009674	GPATCH1	96	80.285	Propithecus_coquereli
ENSHGLG00100018074	GPATCH1	84	84.016	ENSPVAG00000017767	GPATCH1	91	84.016	Pteropus_vampyrus
ENSHGLG00100018074	GPATCH1	81	55.128	ENSPNYG00000018189	gpatch1	91	54.819	Pundamilia_nyererei
ENSHGLG00100018074	GPATCH1	91	50.655	ENSPNAG00000013187	gpatch1	83	53.584	Pygocentrus_nattereri
ENSHGLG00100018074	GPATCH1	100	81.799	ENSRNOG00000011584	Gpatch1	100	81.906	Rattus_norvegicus
ENSHGLG00100018074	GPATCH1	100	76.709	ENSRBIG00000034723	GPATCH1	100	75.748	Rhinopithecus_bieti
ENSHGLG00100018074	GPATCH1	100	84.171	ENSRROG00000024428	GPATCH1	100	83.850	Rhinopithecus_roxellana
ENSHGLG00100018074	GPATCH1	100	84.278	ENSSBOG00000034650	GPATCH1	100	83.209	Saimiri_boliviensis_boliviensis
ENSHGLG00100018074	GPATCH1	99	71.413	ENSSHAG00000016016	GPATCH1	99	71.868	Sarcophilus_harrisii
ENSHGLG00100018074	GPATCH1	81	54.278	ENSSFOG00015011535	gpatch1	83	54.342	Scleropages_formosus
ENSHGLG00100018074	GPATCH1	99	44.912	ENSSMAG00000002883	gpatch1	93	46.479	Scophthalmus_maximus
ENSHGLG00100018074	GPATCH1	81	52.125	ENSSDUG00000007444	gpatch1	90	49.666	Seriola_dumerili
ENSHGLG00100018074	GPATCH1	81	52.070	ENSSLDG00000002856	gpatch1	91	52.574	Seriola_lalandi_dorsalis
ENSHGLG00100018074	GPATCH1	72	81.778	ENSSARG00000004108	GPATCH1	72	81.778	Sorex_araneus
ENSHGLG00100018074	GPATCH1	91	84.959	ENSSSCG00000002865	GPATCH1	94	84.841	Sus_scrofa
ENSHGLG00100018074	GPATCH1	92	63.237	ENSTGUG00000009401	GPATCH1	91	63.539	Taeniopygia_guttata
ENSHGLG00100018074	GPATCH1	81	52.031	ENSTRUG00000005785	-	90	49.648	Takifugu_rubripes
ENSHGLG00100018074	GPATCH1	81	52.225	ENSTRUG00000025081	gpatch1	90	49.941	Takifugu_rubripes
ENSHGLG00100018074	GPATCH1	80	52.865	ENSTNIG00000002554	gpatch1	98	53.494	Tetraodon_nigroviridis
ENSHGLG00100018074	GPATCH1	64	72.881	ENSTBEG00000007750	-	84	72.881	Tupaia_belangeri
ENSHGLG00100018074	GPATCH1	91	91.373	ENSTTRG00000012221	GPATCH1	89	91.373	Tursiops_truncatus
ENSHGLG00100018074	GPATCH1	91	84.434	ENSUMAG00000014645	GPATCH1	100	83.095	Ursus_maritimus
ENSHGLG00100018074	GPATCH1	79	94.483	ENSVPAG00000010313	GPATCH1	86	93.478	Vicugna_pacos
ENSHGLG00100018074	GPATCH1	94	84.703	ENSVVUG00000016572	GPATCH1	91	84.174	Vulpes_vulpes
ENSHGLG00100018074	GPATCH1	99	49.947	ENSXETG00000018276	gpatch1	94	53.280	Xenopus_tropicalis