EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00100018112 (Gene tree)
Gene ID: -
Gene Symbol: TRMT1
Alias: FLJ20244|TRM1
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 9321 bases
Position: chrJH172486.1:2212346-2221666
Accession: 25980
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100024663	zf-CCCH	PF00642.24	5.1e-06	1	1
ENSHGLP00100024661	zf-CCCH	PF00642.24	5.2e-06	1	1
ENSHGLP00100024662	zf-CCCH	PF00642.24	5.4e-06	1	1
ENSHGLP00100024661	TRM	PF02005.16	1.1e-146	1	1
ENSHGLP00100024662	TRM	PF02005.16	1.1e-146	1	1
ENSHGLP00100024663	TRM	PF02005.16	1.1e-138	1	1
ENSHGLP00100024663	Met_10	PF02475.16	7.5e-07	1	1
ENSHGLP00100024661	Met_10	PF02475.16	8e-07	1	1
ENSHGLP00100024662	Met_10	PF02475.16	8.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100024916	TRMT1-203	1761	-	ENSHGLP00100024663	586 (aa)	-	-
ENSHGLT00100024914	TRMT1-201	1833	-	ENSHGLP00100024661	610 (aa)	-	-
ENSHGLT00100024915	TRMT1-202	1851	-	ENSHGLP00100024662	616 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100018112's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100018112's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100018112	TRMT1	97	80.392	ENSG00000104907	TRMT1	100	93.229	Homo_sapiens
ENSHGLG00100018112	TRMT1	99	77.238	ENSAMEG00000012598	TRMT1	98	77.238	Ailuropoda_melanoleuca
ENSHGLG00100018112	TRMT1	90	53.199	ENSACIG00000018680	trmt1	92	53.445	Amphilophus_citrinellus
ENSHGLG00100018112	TRMT1	91	60.199	ENSAOCG00000006781	trmt1	89	60.199	Amphiprion_ocellaris
ENSHGLG00100018112	TRMT1	91	60.399	ENSAPEG00000007712	trmt1	89	60.399	Amphiprion_percula
ENSHGLG00100018112	TRMT1	87	62.847	ENSATEG00000001872	trmt1	84	62.847	Anabas_testudineus
ENSHGLG00100018112	TRMT1	88	62.457	ENSACAG00000003825	TRMT1	93	62.457	Anolis_carolinensis
ENSHGLG00100018112	TRMT1	99	75.114	ENSANAG00000023016	TRMT1	99	77.047	Aotus_nancymaae
ENSHGLG00100018112	TRMT1	87	62.100	ENSACLG00000010073	trmt1	92	62.100	Astatotilapia_calliptera
ENSHGLG00100018112	TRMT1	87	62.392	ENSAMXG00000012026	trmt1	85	62.392	Astyanax_mexicanus
ENSHGLG00100018112	TRMT1	99	76.480	ENSBTAG00000019325	TRMT1	94	76.480	Bos_taurus
ENSHGLG00100018112	TRMT1	81	40.438	WBGene00006613	trm-1	89	40.438	Caenorhabditis_elegans
ENSHGLG00100018112	TRMT1	98	75.957	ENSCJAG00000004566	TRMT1	99	75.957	Callithrix_jacchus
ENSHGLG00100018112	TRMT1	99	78.779	ENSCAFG00000017070	TRMT1	99	79.022	Canis_familiaris
ENSHGLG00100018112	TRMT1	99	79.014	ENSCAFG00020005397	TRMT1	99	79.014	Canis_lupus_dingo
ENSHGLG00100018112	TRMT1	99	76.783	ENSCHIG00000013569	TRMT1	99	76.783	Capra_hircus
ENSHGLG00100018112	TRMT1	97	79.022	ENSTSYG00000003207	TRMT1	99	78.803	Carlito_syrichta
ENSHGLG00100018112	TRMT1	85	78.558	ENSCAPG00000003355	TRMT1	99	79.256	Cavia_aperea
ENSHGLG00100018112	TRMT1	99	78.931	ENSCPOG00000011754	TRMT1	99	78.931	Cavia_porcellus
ENSHGLG00100018112	TRMT1	98	75.851	ENSCCAG00000022263	TRMT1	99	76.651	Cebus_capucinus
ENSHGLG00100018112	TRMT1	94	67.657	ENSCATG00000038220	-	97	67.657	Cercocebus_atys
ENSHGLG00100018112	TRMT1	99	80.275	ENSCATG00000039850	TRMT1	99	80.275	Cercocebus_atys
ENSHGLG00100018112	TRMT1	98	85.781	ENSCLAG00000015295	TRMT1	99	83.955	Chinchilla_lanigera
ENSHGLG00100018112	TRMT1	86	87.170	ENSCSAG00000006500	TRMT1	99	87.170	Chlorocebus_sabaeus
ENSHGLG00100018112	TRMT1	95	60.781	ENSCPBG00000023866	TRMT1	94	60.938	Chrysemys_picta_bellii
ENSHGLG00100018112	TRMT1	79	47.154	ENSCING00000002884	-	84	47.154	Ciona_intestinalis
ENSHGLG00100018112	TRMT1	77	47.246	ENSCSAVG00000010927	-	88	47.246	Ciona_savignyi
ENSHGLG00100018112	TRMT1	97	59.184	ENSCANG00000031650	-	99	60.372	Colobus_angolensis_palliatus
ENSHGLG00100018112	TRMT1	98	64.025	ENSCANG00000040631	TRMT1	98	64.409	Colobus_angolensis_palliatus
ENSHGLG00100018112	TRMT1	99	76.462	ENSCGRG00001022594	Trmt1	98	76.613	Cricetulus_griseus_chok1gshd
ENSHGLG00100018112	TRMT1	99	76.462	ENSCGRG00000017732	Trmt1	98	76.613	Cricetulus_griseus_crigri
ENSHGLG00100018112	TRMT1	87	60.664	ENSCSEG00000001643	trmt1	84	60.664	Cynoglossus_semilaevis
ENSHGLG00100018112	TRMT1	87	62.369	ENSCVAG00000011886	trmt1	86	62.369	Cyprinodon_variegatus
ENSHGLG00100018112	TRMT1	87	60.585	ENSDARG00000010978	trmt1	85	60.720	Danio_rerio
ENSHGLG00100018112	TRMT1	83	52.080	ENSDNOG00000048240	-	94	51.899	Dasypus_novemcinctus
ENSHGLG00100018112	TRMT1	99	74.679	ENSDORG00000014298	Trmt1	99	74.679	Dipodomys_ordii
ENSHGLG00100018112	TRMT1	77	49.370	FBgn0032430	CG6388	80	49.370	Drosophila_melanogaster
ENSHGLG00100018112	TRMT1	61	80.690	ENSETEG00000015483	-	54	80.690	Echinops_telfairi
ENSHGLG00100018112	TRMT1	78	52.632	ENSEBUG00000003449	trmt1	67	52.561	Eptatretus_burgeri
ENSHGLG00100018112	TRMT1	95	77.760	ENSEASG00005004050	TRMT1	99	77.445	Equus_asinus_asinus
ENSHGLG00100018112	TRMT1	95	78.080	ENSECAG00000016149	TRMT1	99	77.760	Equus_caballus
ENSHGLG00100018112	TRMT1	87	60.208	ENSELUG00000021659	trmt1	85	60.208	Esox_lucius
ENSHGLG00100018112	TRMT1	98	78.905	ENSFCAG00000000483	TRMT1	99	78.905	Felis_catus
ENSHGLG00100018112	TRMT1	99	85.103	ENSFDAG00000007386	TRMT1	100	85.103	Fukomys_damarensis
ENSHGLG00100018112	TRMT1	81	67.400	ENSFHEG00000012865	trmt1	83	67.400	Fundulus_heteroclitus
ENSHGLG00100018112	TRMT1	87	57.093	ENSGMOG00000006564	trmt1	98	57.093	Gadus_morhua
ENSHGLG00100018112	TRMT1	90	60.637	ENSGAFG00000011862	trmt1	92	61.092	Gambusia_affinis
ENSHGLG00100018112	TRMT1	93	58.388	ENSGACG00000000227	trmt1	99	57.649	Gasterosteus_aculeatus
ENSHGLG00100018112	TRMT1	96	64.250	ENSGAGG00000016432	TRMT1	93	64.250	Gopherus_agassizii
ENSHGLG00100018112	TRMT1	97	80.719	ENSGGOG00000014007	TRMT1	99	80.354	Gorilla_gorilla
ENSHGLG00100018112	TRMT1	85	56.204	ENSHBUG00000008821	trmt1	92	56.204	Haplochromis_burtoni
ENSHGLG00100018112	TRMT1	100	99.829	ENSHGLG00000015972	TRMT1	100	99.829	Heterocephalus_glaber_female
ENSHGLG00100018112	TRMT1	87	59.266	ENSHCOG00000009447	trmt1	88	59.266	Hippocampus_comes
ENSHGLG00100018112	TRMT1	88	61.008	ENSIPUG00000002899	trmt1	86	61.345	Ictalurus_punctatus
ENSHGLG00100018112	TRMT1	99	78.537	ENSSTOG00000012531	TRMT1	99	78.537	Ictidomys_tridecemlineatus
ENSHGLG00100018112	TRMT1	95	75.626	ENSJJAG00000017154	Trmt1	99	73.768	Jaculus_jaculus
ENSHGLG00100018112	TRMT1	89	62.034	ENSKMAG00000011809	trmt1	95	61.189	Kryptolebias_marmoratus
ENSHGLG00100018112	TRMT1	87	61.431	ENSLBEG00000012703	trmt1	84	61.431	Labrus_bergylta
ENSHGLG00100018112	TRMT1	87	53.310	ENSLACG00000014585	TRMT1	96	52.542	Latimeria_chalumnae
ENSHGLG00100018112	TRMT1	87	63.555	ENSLOCG00000006479	trmt1	97	63.734	Lepisosteus_oculatus
ENSHGLG00100018112	TRMT1	98	78.450	ENSLAFG00000014072	TRMT1	99	78.450	Loxodonta_africana
ENSHGLG00100018112	TRMT1	99	80.275	ENSMFAG00000033143	TRMT1	99	80.275	Macaca_fascicularis
ENSHGLG00100018112	TRMT1	98	78.727	ENSMMUG00000001167	TRMT1	99	78.727	Macaca_mulatta
ENSHGLG00100018112	TRMT1	99	80.275	ENSMNEG00000037867	TRMT1	99	80.275	Macaca_nemestrina
ENSHGLG00100018112	TRMT1	98	79.903	ENSMLEG00000016142	TRMT1	98	79.903	Mandrillus_leucophaeus
ENSHGLG00100018112	TRMT1	94	59.365	ENSMAMG00000004357	trmt1	94	59.365	Mastacembelus_armatus
ENSHGLG00100018112	TRMT1	93	58.995	ENSMZEG00005014510	trmt1	94	58.995	Maylandia_zebra
ENSHGLG00100018112	TRMT1	98	76.688	ENSMAUG00000011134	Trmt1	98	76.688	Mesocricetus_auratus
ENSHGLG00100018112	TRMT1	99	79.818	ENSMICG00000000793	TRMT1	99	79.818	Microcebus_murinus
ENSHGLG00100018112	TRMT1	99	76.805	ENSMOCG00000015895	Trmt1	98	76.840	Microtus_ochrogaster
ENSHGLG00100018112	TRMT1	87	61.364	ENSMMOG00000011097	trmt1	92	61.364	Mola_mola
ENSHGLG00100018112	TRMT1	94	67.961	ENSMODG00000011619	TRMT1	99	67.961	Monodelphis_domestica
ENSHGLG00100018112	TRMT1	99	76.083	MGP_CAROLIEiJ_G0031304	Trmt1	100	82.129	Mus_caroli
ENSHGLG00100018112	TRMT1	99	76.083	ENSMUSG00000001909	Trmt1	100	81.749	Mus_musculus
ENSHGLG00100018112	TRMT1	99	75.762	MGP_SPRETEiJ_G0032422	Trmt1	100	81.369	Mus_spretus
ENSHGLG00100018112	TRMT1	99	77.710	ENSMPUG00000004210	TRMT1	94	77.710	Mustela_putorius_furo
ENSHGLG00100018112	TRMT1	99	77.086	ENSMLUG00000012809	TRMT1	98	77.086	Myotis_lucifugus
ENSHGLG00100018112	TRMT1	99	74.238	ENSNGAG00000022486	Trmt1	98	74.238	Nannospalax_galili
ENSHGLG00100018112	TRMT1	74	60.896	ENSNBRG00000024376	trmt1	85	60.896	Neolamprologus_brichardi
ENSHGLG00100018112	TRMT1	81	85.970	ENSNLEG00000013019	-	98	85.970	Nomascus_leucogenys
ENSHGLG00100018112	TRMT1	88	70.660	ENSMEUG00000013756	TRMT1	97	70.660	Notamacropus_eugenii
ENSHGLG00100018112	TRMT1	80	74.150	ENSOPRG00000009471	-	81	74.150	Ochotona_princeps
ENSHGLG00100018112	TRMT1	100	83.435	ENSODEG00000010323	TRMT1	100	83.435	Octodon_degus
ENSHGLG00100018112	TRMT1	94	59.646	ENSONIG00000000400	trmt1	99	59.646	Oreochromis_niloticus
ENSHGLG00100018112	TRMT1	85	86.286	ENSOCUG00000021934	TRMT1	99	86.286	Oryctolagus_cuniculus
ENSHGLG00100018112	TRMT1	87	59.752	ENSORLG00000020074	trmt1	90	58.003	Oryzias_latipes
ENSHGLG00100018112	TRMT1	87	60.627	ENSORLG00020007561	trmt1	89	60.453	Oryzias_latipes_hni
ENSHGLG00100018112	TRMT1	90	59.664	ENSORLG00015006547	trmt1	89	59.664	Oryzias_latipes_hsok
ENSHGLG00100018112	TRMT1	91	59.204	ENSOMEG00000019343	trmt1	91	59.204	Oryzias_melastigma
ENSHGLG00100018112	TRMT1	96	77.021	ENSOGAG00000025576	TRMT1	98	77.021	Otolemur_garnettii
ENSHGLG00100018112	TRMT1	99	64.455	ENSOARG00000009397	TRMT1	93	63.932	Ovis_aries
ENSHGLG00100018112	TRMT1	98	70.113	ENSPPRG00000012117	TRMT1	99	70.407	Panthera_pardus
ENSHGLG00100018112	TRMT1	78	86.707	ENSPTIG00000008833	TRMT1	96	86.707	Panthera_tigris_altaica
ENSHGLG00100018112	TRMT1	97	80.556	ENSPTRG00000010557	TRMT1	99	80.193	Pan_troglodytes
ENSHGLG00100018112	TRMT1	98	58.423	ENSPTRG00000050421	-	99	58.423	Pan_troglodytes
ENSHGLG00100018112	TRMT1	98	80.291	ENSPANG00000009247	TRMT1	98	80.291	Papio_anubis
ENSHGLG00100018112	TRMT1	94	66.783	ENSPANG00000034058	-	95	66.783	Papio_anubis
ENSHGLG00100018112	TRMT1	87	63.287	ENSPKIG00000005309	trmt1	84	63.287	Paramormyrops_kingsleyae
ENSHGLG00100018112	TRMT1	89	53.741	ENSPSIG00000008762	TRMT1	86	52.381	Pelodiscus_sinensis
ENSHGLG00100018112	TRMT1	87	60.839	ENSPMGG00000019764	trmt1	94	59.000	Periophthalmus_magnuspinnatus
ENSHGLG00100018112	TRMT1	98	78.930	ENSPEMG00000016247	Trmt1	98	78.491	Peromyscus_maniculatus_bairdii
ENSHGLG00100018112	TRMT1	89	56.089	ENSPMAG00000004329	trmt1	91	56.089	Petromyzon_marinus
ENSHGLG00100018112	TRMT1	96	66.873	ENSPCIG00000019273	TRMT1	99	66.873	Phascolarctos_cinereus
ENSHGLG00100018112	TRMT1	93	60.912	ENSPFOG00000008527	trmt1	94	60.912	Poecilia_formosa
ENSHGLG00100018112	TRMT1	93	61.614	ENSPLAG00000018788	trmt1	94	61.614	Poecilia_latipinna
ENSHGLG00100018112	TRMT1	93	60.749	ENSPMEG00000013120	trmt1	94	60.749	Poecilia_mexicana
ENSHGLG00100018112	TRMT1	95	58.852	ENSPREG00000000211	trmt1	93	59.011	Poecilia_reticulata
ENSHGLG00100018112	TRMT1	97	80.218	ENSPPYG00000009622	TRMT1	99	79.877	Pongo_abelii
ENSHGLG00100018112	TRMT1	98	71.669	ENSPCAG00000003698	TRMT1	99	71.669	Procavia_capensis
ENSHGLG00100018112	TRMT1	98	80.227	ENSPCOG00000008653	TRMT1	98	80.227	Propithecus_coquereli
ENSHGLG00100018112	TRMT1	99	78.528	ENSPVAG00000015076	TRMT1	99	78.528	Pteropus_vampyrus
ENSHGLG00100018112	TRMT1	87	59.162	ENSPNYG00000013960	trmt1	92	59.162	Pundamilia_nyererei
ENSHGLG00100018112	TRMT1	80	63.180	ENSPNAG00000024859	trmt1	88	63.180	Pygocentrus_nattereri
ENSHGLG00100018112	TRMT1	95	76.077	ENSRNOG00000002914	Trmt1	98	76.077	Rattus_norvegicus
ENSHGLG00100018112	TRMT1	96	60.828	ENSRBIG00000037505	-	98	61.068	Rhinopithecus_bieti
ENSHGLG00100018112	TRMT1	99	79.817	ENSRBIG00000038324	TRMT1	99	79.817	Rhinopithecus_bieti
ENSHGLG00100018112	TRMT1	96	60.350	ENSRROG00000031847	-	97	60.283	Rhinopithecus_roxellana
ENSHGLG00100018112	TRMT1	99	79.969	ENSRROG00000028599	TRMT1	99	79.969	Rhinopithecus_roxellana
ENSHGLG00100018112	TRMT1	78	37.805	YDR120C	-	83	37.805	Saccharomyces_cerevisiae
ENSHGLG00100018112	TRMT1	97	75.327	ENSSBOG00000028861	TRMT1	99	76.651	Saimiri_boliviensis_boliviensis
ENSHGLG00100018112	TRMT1	87	71.804	ENSSHAG00000014381	TRMT1	98	69.130	Sarcophilus_harrisii
ENSHGLG00100018112	TRMT1	90	60.575	ENSSFOG00015004139	trmt1	86	60.575	Scleropages_formosus
ENSHGLG00100018112	TRMT1	87	62.500	ENSSMAG00000021136	trmt1	85	62.500	Scophthalmus_maximus
ENSHGLG00100018112	TRMT1	90	61.486	ENSSDUG00000012740	trmt1	87	61.486	Seriola_dumerili
ENSHGLG00100018112	TRMT1	90	61.149	ENSSLDG00000005971	trmt1	87	61.149	Seriola_lalandi_dorsalis
ENSHGLG00100018112	TRMT1	86	80.151	ENSSARG00000005138	TRMT1	93	80.151	Sorex_araneus
ENSHGLG00100018112	TRMT1	87	54.307	ENSSPUG00000001084	TRMT1	89	55.056	Sphenodon_punctatus
ENSHGLG00100018112	TRMT1	91	60.544	ENSSPAG00000007153	trmt1	98	60.237	Stegastes_partitus
ENSHGLG00100018112	TRMT1	97	78.425	ENSSSCG00000013744	TRMT1	99	78.425	Sus_scrofa
ENSHGLG00100018112	TRMT1	94	55.323	ENSTRUG00000010700	trmt1	93	55.645	Takifugu_rubripes
ENSHGLG00100018112	TRMT1	87	61.082	ENSTNIG00000018808	trmt1	98	61.082	Tetraodon_nigroviridis
ENSHGLG00100018112	TRMT1	97	75.117	ENSTTRG00000006379	TRMT1	99	75.420	Tursiops_truncatus
ENSHGLG00100018112	TRMT1	99	77.245	ENSUAMG00000022911	TRMT1	99	78.812	Ursus_americanus
ENSHGLG00100018112	TRMT1	97	77.129	ENSUMAG00000006027	TRMT1	99	77.129	Ursus_maritimus
ENSHGLG00100018112	TRMT1	99	78.149	ENSVVUG00000024177	TRMT1	99	78.149	Vulpes_vulpes
ENSHGLG00100018112	TRMT1	76	69.677	ENSXETG00000033863	TRMT1	92	69.677	Xenopus_tropicalis
ENSHGLG00100018112	TRMT1	90	60.804	ENSXCOG00000015733	trmt1	92	61.037	Xiphophorus_couchianus
ENSHGLG00100018112	TRMT1	87	62.413	ENSXMAG00000013823	trmt1	97	62.413	Xiphophorus_maculatus