EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100018421 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 35789 bases
Position: chrJH173446.1:5505-41293
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100025103	ResIII	PF04851.15	6.5e-11	1	1
ENSHGLP00100025102	ResIII	PF04851.15	6.8e-11	1	1
ENSHGLP00100025101	ResIII	PF04851.15	7e-11	1	1
ENSHGLP00100025103	DEAD	PF00270.29	3.6e-06	1	1
ENSHGLP00100025102	DEAD	PF00270.29	3.8e-06	1	1
ENSHGLP00100025101	DEAD	PF00270.29	4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100025357	-	3084	-	ENSHGLP00100025101	1027 (aa)	-	-
ENSHGLT00100025359	-	3178	-	ENSHGLP00100025103	993 (aa)	-	G5C5K1
ENSHGLT00100025358	-	3036	-	ENSHGLP00100025102	1011 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100018421's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100018421's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100018421	-	51	30.473	ENSHGLG00100008108	-	61	30.473
ENSHGLG00100018421	-	50	47.012	ENSHGLG00100017230	-	63	47.012
ENSHGLG00100018421	-	56	41.681	ENSHGLG00100007155	CHD1L	64	42.382
ENSHGLG00100018421	-	98	83.891	ENSHGLG00100001102	SMARCA1	99	83.891
ENSHGLG00100018421	-	51	38.761	ENSHGLG00100001957	-	76	38.761

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100018421	-	100	99.295	ENSG00000153147	SMARCA5	96	98.310	Homo_sapiens
ENSHGLG00100018421	-	100	99.597	ENSAMEG00000009585	SMARCA5	96	97.923	Ailuropoda_melanoleuca
ENSHGLG00100018421	-	97	96.612	ENSAPLG00000009206	SMARCA5	100	96.612	Anas_platyrhynchos
ENSHGLG00100018421	-	100	96.479	ENSACAG00000003038	SMARCA5	96	96.479	Anolis_carolinensis
ENSHGLG00100018421	-	100	99.295	ENSANAG00000019345	SMARCA5	99	99.295	Aotus_nancymaae
ENSHGLG00100018421	-	100	99.496	ENSBTAG00000003399	SMARCA5	96	97.923	Bos_taurus
ENSHGLG00100018421	-	100	99.396	ENSCJAG00000002735	SMARCA5	96	98.211	Callithrix_jacchus
ENSHGLG00100018421	-	100	99.597	ENSCAFG00000007525	SMARCA5	96	97.923	Canis_familiaris
ENSHGLG00100018421	-	98	99.486	ENSCAFG00020025641	SMARCA5	95	97.780	Canis_lupus_dingo
ENSHGLG00100018421	-	100	97.684	ENSCHIG00000016375	-	97	96.142	Capra_hircus
ENSHGLG00100018421	-	100	99.496	ENSCHIG00000013730	-	96	97.923	Capra_hircus
ENSHGLG00100018421	-	100	99.396	ENSTSYG00000009954	SMARCA5	100	99.296	Carlito_syrichta
ENSHGLG00100018421	-	97	99.380	ENSCAPG00000013747	SMARCA5	98	96.439	Cavia_aperea
ENSHGLG00100018421	-	100	99.698	ENSCPOG00000002259	SMARCA5	96	98.510	Cavia_porcellus
ENSHGLG00100018421	-	100	99.396	ENSCCAG00000027215	SMARCA5	99	99.396	Cebus_capucinus
ENSHGLG00100018421	-	100	99.396	ENSCATG00000044917	SMARCA5	96	98.211	Cercocebus_atys
ENSHGLG00100018421	-	100	99.698	ENSCLAG00000006153	SMARCA5	100	99.698	Chinchilla_lanigera
ENSHGLG00100018421	-	98	99.381	ENSCSAG00000003448	SMARCA5	100	99.381	Chlorocebus_sabaeus
ENSHGLG00100018421	-	91	100.000	ENSCHOG00000011724	SMARCA5	88	98.405	Choloepus_hoffmanni
ENSHGLG00100018421	-	100	98.390	ENSCPBG00000027535	SMARCA5	96	98.390	Chrysemys_picta_bellii
ENSHGLG00100018421	-	100	99.396	ENSCANG00000041629	SMARCA5	96	98.211	Colobus_angolensis_palliatus
ENSHGLG00100018421	-	100	99.698	ENSCGRG00001012719	Smarca5	94	99.698	Cricetulus_griseus_chok1gshd
ENSHGLG00100018421	-	100	99.698	ENSCGRG00000001417	Smarca5	99	99.597	Cricetulus_griseus_crigri
ENSHGLG00100018421	-	100	96.677	ENSDNOG00000009158	SMARCA5	96	95.054	Dasypus_novemcinctus
ENSHGLG00100018421	-	95	90.823	ENSDORG00000003466	Smarca5	97	90.823	Dipodomys_ordii
ENSHGLG00100018421	-	97	85.744	ENSEBUG00000014773	SMARCA5	96	85.744	Eptatretus_burgeri
ENSHGLG00100018421	-	100	99.597	ENSEASG00005001866	SMARCA5	98	99.515	Equus_asinus_asinus
ENSHGLG00100018421	-	100	99.597	ENSECAG00000002676	SMARCA5	95	98.705	Equus_caballus
ENSHGLG00100018421	-	100	95.065	ENSEEUG00000013176	SMARCA5	100	95.065	Erinaceus_europaeus
ENSHGLG00100018421	-	97	88.969	ENSELUG00000014653	SMARCA5	99	88.969	Esox_lucius
ENSHGLG00100018421	-	100	99.597	ENSFCAG00000004544	SMARCA5	96	97.923	Felis_catus
ENSHGLG00100018421	-	98	97.216	ENSFALG00000004987	SMARCA5	100	97.216	Ficedula_albicollis
ENSHGLG00100018421	-	100	99.899	ENSFDAG00000021016	SMARCA5	100	99.899	Fukomys_damarensis
ENSHGLG00100018421	-	98	89.048	ENSGMOG00000007519	SMARCA5	94	89.048	Gadus_morhua
ENSHGLG00100018421	-	100	97.485	ENSGALG00000009913	SMARCA5	96	97.485	Gallus_gallus
ENSHGLG00100018421	-	98	90.379	ENSGACG00000017238	SMARCA5	95	90.379	Gasterosteus_aculeatus
ENSHGLG00100018421	-	100	98.290	ENSGAGG00000019882	SMARCA5	96	98.290	Gopherus_agassizii
ENSHGLG00100018421	-	100	99.295	ENSGGOG00000012595	SMARCA5	100	99.195	Gorilla_gorilla
ENSHGLG00100018421	-	100	100.000	ENSHGLG00000000816	-	95	99.698	Heterocephalus_glaber_female
ENSHGLG00100018421	-	100	90.332	ENSHGLG00000000317	-	97	88.944	Heterocephalus_glaber_female
ENSHGLG00100018421	-	100	99.698	ENSSTOG00000010683	SMARCA5	96	98.121	Ictidomys_tridecemlineatus
ENSHGLG00100018421	-	100	99.396	ENSJJAG00000014965	Smarca5	95	99.396	Jaculus_jaculus
ENSHGLG00100018421	-	99	95.358	ENSLACG00000007091	SMARCA5	97	95.358	Latimeria_chalumnae
ENSHGLG00100018421	-	99	92.081	ENSLOCG00000008966	SMARCA5	96	92.081	Lepisosteus_oculatus
ENSHGLG00100018421	-	100	99.597	ENSLAFG00000007795	SMARCA5	96	98.216	Loxodonta_africana
ENSHGLG00100018421	-	100	99.396	ENSMFAG00000043649	SMARCA5	96	98.211	Macaca_fascicularis
ENSHGLG00100018421	-	100	99.396	ENSMMUG00000000829	SMARCA5	97	99.262	Macaca_mulatta
ENSHGLG00100018421	-	100	99.396	ENSMNEG00000031916	SMARCA5	96	98.211	Macaca_nemestrina
ENSHGLG00100018421	-	100	99.396	ENSMLEG00000042393	SMARCA5	96	98.211	Mandrillus_leucophaeus
ENSHGLG00100018421	-	100	97.485	ENSMGAG00000003517	SMARCA5	99	97.581	Meleagris_gallopavo
ENSHGLG00100018421	-	100	99.698	ENSMAUG00000015902	Smarca5	98	99.698	Mesocricetus_auratus
ENSHGLG00100018421	-	100	99.396	ENSMICG00000003971	SMARCA5	100	97.800	Microcebus_murinus
ENSHGLG00100018421	-	100	99.295	ENSMOCG00000016986	-	96	98.213	Microtus_ochrogaster
ENSHGLG00100018421	-	100	98.993	ENSMODG00000000391	SMARCA5	95	98.993	Monodelphis_domestica
ENSHGLG00100018421	-	100	99.396	ENSMUSG00000031715	Smarca5	96	98.117	Mus_musculus
ENSHGLG00100018421	-	100	99.597	MGP_PahariEiJ_G0022862	Smarca5	96	98.315	Mus_pahari
ENSHGLG00100018421	-	100	99.698	ENSMLUG00000000468	SMARCA5	96	98.121	Myotis_lucifugus
ENSHGLG00100018421	-	100	99.597	ENSNGAG00000000441	Smarca5	96	98.510	Nannospalax_galili
ENSHGLG00100018421	-	100	99.396	ENSNLEG00000005383	SMARCA5	96	98.211	Nomascus_leucogenys
ENSHGLG00100018421	-	97	91.322	ENSMEUG00000001267	SMARCA5	100	91.322	Notamacropus_eugenii
ENSHGLG00100018421	-	90	98.429	ENSOPRG00000014427	SMARCA5	86	98.429	Ochotona_princeps
ENSHGLG00100018421	-	98	98.968	ENSOANG00000013921	SMARCA5	100	98.968	Ornithorhynchus_anatinus
ENSHGLG00100018421	-	98	99.794	ENSOCUG00000013042	SMARCA5	100	99.794	Oryctolagus_cuniculus
ENSHGLG00100018421	-	100	99.396	ENSOGAG00000009702	SMARCA5	96	97.923	Otolemur_garnettii
ENSHGLG00100018421	-	99	99.294	ENSOARG00000010589	SMARCA5	96	97.723	Ovis_aries
ENSHGLG00100018421	-	100	99.194	ENSPPAG00000028523	SMARCA5	100	99.095	Pan_paniscus
ENSHGLG00100018421	-	100	93.656	ENSPPRG00000004925	SMARCA5	96	92.977	Panthera_pardus
ENSHGLG00100018421	-	100	99.597	ENSPTIG00000020959	SMARCA5	97	98.117	Panthera_tigris_altaica
ENSHGLG00100018421	-	100	99.295	ENSPTRG00000016472	SMARCA5	100	99.195	Pan_troglodytes
ENSHGLG00100018421	-	100	99.396	ENSPANG00000001175	SMARCA5	96	98.211	Papio_anubis
ENSHGLG00100018421	-	98	90.779	ENSPKIG00000015699	SMARCA5	98	89.598	Paramormyrops_kingsleyae
ENSHGLG00100018421	-	98	91.237	ENSPKIG00000015885	SMARCA5	100	91.237	Paramormyrops_kingsleyae
ENSHGLG00100018421	-	100	95.976	ENSPSIG00000004177	SMARCA5	99	96.069	Pelodiscus_sinensis
ENSHGLG00100018421	-	97	89.712	ENSPMGG00000012316	SMARCA5	100	89.712	Periophthalmus_magnuspinnatus
ENSHGLG00100018421	-	100	99.698	ENSPEMG00000008060	Smarca5	98	99.698	Peromyscus_maniculatus_bairdii
ENSHGLG00100018421	-	99	70.582	ENSPMAG00000006011	SMARCA5	81	85.600	Petromyzon_marinus
ENSHGLG00100018421	-	64	86.739	ENSPMAG00000008026	SMARCA5	99	86.739	Petromyzon_marinus
ENSHGLG00100018421	-	100	98.993	ENSPCIG00000003926	SMARCA5	96	98.014	Phascolarctos_cinereus
ENSHGLG00100018421	-	100	99.396	ENSPPYG00000015091	SMARCA5	95	98.506	Pongo_abelii
ENSHGLG00100018421	-	84	95.500	ENSPCAG00000014230	SMARCA5	83	95.500	Procavia_capensis
ENSHGLG00100018421	-	100	96.475	ENSPCOG00000026744	SMARCA5	99	95.875	Propithecus_coquereli
ENSHGLG00100018421	-	100	99.496	ENSPVAG00000006482	SMARCA5	95	99.496	Pteropus_vampyrus
ENSHGLG00100018421	-	99	89.909	ENSPNAG00000027824	SMARCA5	97	90.145	Pygocentrus_nattereri
ENSHGLG00100018421	-	100	99.496	ENSRNOG00000018149	Smarca5	99	99.496	Rattus_norvegicus
ENSHGLG00100018421	-	100	99.396	ENSRBIG00000044644	SMARCA5	96	98.113	Rhinopithecus_bieti
ENSHGLG00100018421	-	100	99.396	ENSRROG00000029591	SMARCA5	99	99.396	Rhinopithecus_roxellana
ENSHGLG00100018421	-	100	99.396	ENSSBOG00000036257	SMARCA5	95	98.506	Saimiri_boliviensis_boliviensis
ENSHGLG00100018421	-	100	98.993	ENSSHAG00000008464	SMARCA5	100	98.993	Sarcophilus_harrisii
ENSHGLG00100018421	-	99	90.578	ENSSFOG00015013252	SMARCA5	96	90.578	Scleropages_formosus
ENSHGLG00100018421	-	99	96.465	ENSSPUG00000007604	SMARCA5	99	96.465	Sphenodon_punctatus
ENSHGLG00100018421	-	100	99.597	ENSSSCG00000009047	SMARCA5	96	98.216	Sus_scrofa
ENSHGLG00100018421	-	100	96.680	ENSTGUG00000002408	SMARCA5	99	96.680	Taeniopygia_guttata
ENSHGLG00100018421	-	98	99.486	ENSUAMG00000023495	SMARCA5	95	97.780	Ursus_americanus
ENSHGLG00100018421	-	100	99.597	ENSUMAG00000015324	SMARCA5	96	99.597	Ursus_maritimus
ENSHGLG00100018421	-	100	99.295	ENSVPAG00000008982	SMARCA5	96	97.725	Vicugna_pacos
ENSHGLG00100018421	-	100	99.597	ENSVVUG00000017473	SMARCA5	96	97.923	Vulpes_vulpes
ENSHGLG00100018421	-	94	93.610	ENSXETG00000017566	smarca5	94	93.610	Xenopus_tropicalis