EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100018594 (Gene tree)
Gene ID: -
Gene Symbol: SNRNP200
Alias: ASCC3L1|BRR2|HELIC2|KIAA0788|RP33|U5-200KD
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 27836 bases
Position: chrJH171109.1:2921400-2949235
Accession: 101704077
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100025345	ResIII	PF04851.15	9.6e-26	1	2
ENSHGLP00100025345	ResIII	PF04851.15	9.6e-26	2	2
ENSHGLP00100025345	DEAD	PF00270.29	2.5e-52	1	2
ENSHGLP00100025345	DEAD	PF00270.29	2.5e-52	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100025604	-	7055	XM_004844357	ENSHGLP00100025345	2136 (aa)	XP_004844414	G5BMV9

Gene Model

Click here to download ENSHGLG00100018594's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100018594's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100018594	SNRNP200	80	43.080	ENSHGLG00100005896	ASCC3	81	43.080

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100018594	SNRNP200	100	99.719	ENSG00000144028	SNRNP200	100	99.719	Homo_sapiens
ENSHGLG00100018594	SNRNP200	99	90.747	ENSAPOG00000010223	snrnp200	99	90.637	Acanthochromis_polyacanthus
ENSHGLG00100018594	SNRNP200	100	99.672	ENSAMEG00000008996	SNRNP200	100	99.672	Ailuropoda_melanoleuca
ENSHGLG00100018594	SNRNP200	97	90.096	ENSACIG00000001764	snrnp200	98	90.096	Amphilophus_citrinellus
ENSHGLG00100018594	SNRNP200	99	90.653	ENSAOCG00000024593	snrnp200	100	89.882	Amphiprion_ocellaris
ENSHGLG00100018594	SNRNP200	97	89.936	ENSAPEG00000012554	snrnp200	100	89.936	Amphiprion_percula
ENSHGLG00100018594	SNRNP200	99	90.606	ENSATEG00000022522	snrnp200	99	90.496	Anabas_testudineus
ENSHGLG00100018594	SNRNP200	99	97.595	ENSAPLG00000004313	SNRNP200	100	97.595	Anas_platyrhynchos
ENSHGLG00100018594	SNRNP200	99	97.322	ENSACAG00000000434	SNRNP200	100	97.322	Anolis_carolinensis
ENSHGLG00100018594	SNRNP200	100	95.149	ENSANAG00000036625	SNRNP200	100	95.569	Aotus_nancymaae
ENSHGLG00100018594	SNRNP200	99	90.418	ENSACLG00000011188	snrnp200	99	90.309	Astatotilapia_calliptera
ENSHGLG00100018594	SNRNP200	99	90.465	ENSAMXG00000005684	snrnp200	99	90.356	Astyanax_mexicanus
ENSHGLG00100018594	SNRNP200	100	99.298	ENSBTAG00000000848	SNRNP200	100	99.298	Bos_taurus
ENSHGLG00100018594	SNRNP200	100	99.672	ENSCJAG00000007514	SNRNP200	100	99.672	Callithrix_jacchus
ENSHGLG00100018594	SNRNP200	100	98.880	ENSCAFG00020019979	SNRNP200	100	99.650	Canis_lupus_dingo
ENSHGLG00100018594	SNRNP200	100	99.485	ENSCHIG00000020611	SNRNP200	100	99.485	Capra_hircus
ENSHGLG00100018594	SNRNP200	100	99.719	ENSTSYG00000010467	SNRNP200	100	99.719	Carlito_syrichta
ENSHGLG00100018594	SNRNP200	99	99.624	ENSCAPG00000017234	SNRNP200	99	99.624	Cavia_aperea
ENSHGLG00100018594	SNRNP200	100	99.906	ENSCPOG00000006776	SNRNP200	100	99.906	Cavia_porcellus
ENSHGLG00100018594	SNRNP200	100	99.672	ENSCCAG00000033962	SNRNP200	100	99.672	Cebus_capucinus
ENSHGLG00100018594	SNRNP200	100	99.719	ENSCATG00000015790	SNRNP200	100	99.719	Cercocebus_atys
ENSHGLG00100018594	SNRNP200	100	99.860	ENSCLAG00000004116	SNRNP200	100	99.860	Chinchilla_lanigera
ENSHGLG00100018594	SNRNP200	100	99.672	ENSCSAG00000017369	SNRNP200	100	99.672	Chlorocebus_sabaeus
ENSHGLG00100018594	SNRNP200	75	99.213	ENSCHOG00000012981	-	59	99.213	Choloepus_hoffmanni
ENSHGLG00100018594	SNRNP200	100	97.616	ENSCPBG00000022571	SNRNP200	100	97.616	Chrysemys_picta_bellii
ENSHGLG00100018594	SNRNP200	99	76.460	ENSCING00000005082	-	99	76.600	Ciona_intestinalis
ENSHGLG00100018594	SNRNP200	100	94.208	ENSCANG00000033932	SNRNP200	100	99.652	Colobus_angolensis_palliatus
ENSHGLG00100018594	SNRNP200	100	99.672	ENSCGRG00001022610	Snrnp200	100	99.672	Cricetulus_griseus_chok1gshd
ENSHGLG00100018594	SNRNP200	100	99.112	ENSCGRG00000016472	Snrnp200	100	99.112	Cricetulus_griseus_crigri
ENSHGLG00100018594	SNRNP200	100	89.841	ENSCSEG00000016399	snrnp200	100	89.841	Cynoglossus_semilaevis
ENSHGLG00100018594	SNRNP200	100	85.487	ENSCVAG00000017631	snrnp200	99	85.487	Cyprinodon_variegatus
ENSHGLG00100018594	SNRNP200	100	90.215	ENSDARG00000077536	snrnp200	99	90.215	Danio_rerio
ENSHGLG00100018594	SNRNP200	100	98.268	ENSDNOG00000011227	SNRNP200	100	98.268	Dasypus_novemcinctus
ENSHGLG00100018594	SNRNP200	100	96.961	ENSDORG00000005861	Snrnp200	100	96.961	Dipodomys_ordii
ENSHGLG00100018594	SNRNP200	100	74.255	FBgn0263599	l(3)72Ab	99	74.162	Drosophila_melanogaster
ENSHGLG00100018594	SNRNP200	95	99.397	ENSETEG00000000162	SNRNP200	74	99.397	Echinops_telfairi
ENSHGLG00100018594	SNRNP200	83	81.256	ENSEBUG00000016524	snrnp200	95	81.256	Eptatretus_burgeri
ENSHGLG00100018594	SNRNP200	100	98.555	ENSEASG00005001884	SNRNP200	100	98.555	Equus_asinus_asinus
ENSHGLG00100018594	SNRNP200	100	99.672	ENSECAG00000019675	SNRNP200	100	99.672	Equus_caballus
ENSHGLG00100018594	SNRNP200	88	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSHGLG00100018594	SNRNP200	99	90.700	ENSELUG00000018948	snrnp200	99	90.590	Esox_lucius
ENSHGLG00100018594	SNRNP200	100	99.719	ENSFCAG00000010699	SNRNP200	100	99.719	Felis_catus
ENSHGLG00100018594	SNRNP200	93	92.857	ENSFALG00000001368	-	95	92.857	Ficedula_albicollis
ENSHGLG00100018594	SNRNP200	100	99.906	ENSFDAG00000004683	SNRNP200	100	99.906	Fukomys_damarensis
ENSHGLG00100018594	SNRNP200	100	87.687	ENSFHEG00000003786	snrnp200	99	87.687	Fundulus_heteroclitus
ENSHGLG00100018594	SNRNP200	100	89.533	ENSGMOG00000004881	snrnp200	99	89.486	Gadus_morhua
ENSHGLG00100018594	SNRNP200	100	87.921	ENSGAFG00000010807	snrnp200	99	87.921	Gambusia_affinis
ENSHGLG00100018594	SNRNP200	100	89.865	ENSGACG00000011474	snrnp200	99	89.771	Gasterosteus_aculeatus
ENSHGLG00100018594	SNRNP200	95	97.532	ENSGAGG00000016069	SNRNP200	99	97.532	Gopherus_agassizii
ENSHGLG00100018594	SNRNP200	100	99.719	ENSGGOG00000005174	SNRNP200	100	99.719	Gorilla_gorilla
ENSHGLG00100018594	SNRNP200	97	87.673	ENSHBUG00000011322	snrnp200	99	87.720	Haplochromis_burtoni
ENSHGLG00100018594	SNRNP200	100	100.000	ENSHGLG00000006654	SNRNP200	100	100.000	Heterocephalus_glaber_female
ENSHGLG00100018594	SNRNP200	100	99.672	ENSSTOG00000016351	SNRNP200	100	99.672	Ictidomys_tridecemlineatus
ENSHGLG00100018594	SNRNP200	100	99.485	ENSJJAG00000023659	Snrnp200	100	99.485	Jaculus_jaculus
ENSHGLG00100018594	SNRNP200	100	87.401	ENSKMAG00000003665	snrnp200	99	87.401	Kryptolebias_marmoratus
ENSHGLG00100018594	SNRNP200	100	90.122	ENSLBEG00000021585	snrnp200	99	90.122	Labrus_bergylta
ENSHGLG00100018594	SNRNP200	82	94.550	ENSLACG00000000226	SNRNP200	99	94.550	Latimeria_chalumnae
ENSHGLG00100018594	SNRNP200	100	92.135	ENSLOCG00000015198	snrnp200	99	92.135	Lepisosteus_oculatus
ENSHGLG00100018594	SNRNP200	100	99.391	ENSLAFG00000015626	SNRNP200	100	99.391	Loxodonta_africana
ENSHGLG00100018594	SNRNP200	100	99.672	ENSMFAG00000040174	SNRNP200	100	99.672	Macaca_fascicularis
ENSHGLG00100018594	SNRNP200	100	99.672	ENSMMUG00000023261	SNRNP200	100	99.672	Macaca_mulatta
ENSHGLG00100018594	SNRNP200	100	99.625	ENSMNEG00000032398	SNRNP200	100	99.625	Macaca_nemestrina
ENSHGLG00100018594	SNRNP200	100	99.719	ENSMLEG00000019083	SNRNP200	100	99.719	Mandrillus_leucophaeus
ENSHGLG00100018594	SNRNP200	100	90.080	ENSMAMG00000007851	snrnp200	99	90.033	Mastacembelus_armatus
ENSHGLG00100018594	SNRNP200	97	87.673	ENSMZEG00005010787	snrnp200	99	87.720	Maylandia_zebra
ENSHGLG00100018594	SNRNP200	97	97.146	ENSMGAG00000001831	SNRNP200	100	97.146	Meleagris_gallopavo
ENSHGLG00100018594	SNRNP200	100	99.625	ENSMAUG00000011825	Snrnp200	100	99.625	Mesocricetus_auratus
ENSHGLG00100018594	SNRNP200	100	99.672	ENSMICG00000004710	SNRNP200	100	99.672	Microcebus_murinus
ENSHGLG00100018594	SNRNP200	100	97.051	ENSMOCG00000011814	Snrnp200	100	97.051	Microtus_ochrogaster
ENSHGLG00100018594	SNRNP200	99	88.868	ENSMMOG00000014167	snrnp200	99	88.764	Mola_mola
ENSHGLG00100018594	SNRNP200	100	98.830	ENSMODG00000008475	SNRNP200	100	98.830	Monodelphis_domestica
ENSHGLG00100018594	SNRNP200	99	90.653	ENSMALG00000001973	snrnp200	99	90.543	Monopterus_albus
ENSHGLG00100018594	SNRNP200	100	99.438	MGP_CAROLIEiJ_G0024250	Snrnp200	100	99.438	Mus_caroli
ENSHGLG00100018594	SNRNP200	100	99.485	ENSMUSG00000003660	Snrnp200	100	99.485	Mus_musculus
ENSHGLG00100018594	SNRNP200	100	99.532	MGP_PahariEiJ_G0025695	Snrnp200	100	99.532	Mus_pahari
ENSHGLG00100018594	SNRNP200	100	99.485	MGP_SPRETEiJ_G0025170	Snrnp200	100	99.724	Mus_spretus
ENSHGLG00100018594	SNRNP200	100	99.625	ENSMPUG00000008949	SNRNP200	100	99.625	Mustela_putorius_furo
ENSHGLG00100018594	SNRNP200	100	95.318	ENSMLUG00000027511	-	100	95.318	Myotis_lucifugus
ENSHGLG00100018594	SNRNP200	100	99.065	ENSMLUG00000010493	SNRNP200	100	99.065	Myotis_lucifugus
ENSHGLG00100018594	SNRNP200	100	99.719	ENSNGAG00000021993	Snrnp200	100	99.719	Nannospalax_galili
ENSHGLG00100018594	SNRNP200	90	90.203	ENSNBRG00000017960	snrnp200	98	90.203	Neolamprologus_brichardi
ENSHGLG00100018594	SNRNP200	100	95.072	ENSNLEG00000000025	SNRNP200	100	95.289	Nomascus_leucogenys
ENSHGLG00100018594	SNRNP200	100	100.000	ENSMEUG00000010532	SNRNP200	79	100.000	Notamacropus_eugenii
ENSHGLG00100018594	SNRNP200	100	95.787	ENSOPRG00000015464	SNRNP200	100	95.787	Ochotona_princeps
ENSHGLG00100018594	SNRNP200	100	99.860	ENSODEG00000008366	SNRNP200	100	99.860	Octodon_degus
ENSHGLG00100018594	SNRNP200	99	90.418	ENSONIG00000010714	snrnp200	99	90.309	Oreochromis_niloticus
ENSHGLG00100018594	SNRNP200	100	99.579	ENSOCUG00000009864	SNRNP200	100	99.579	Oryctolagus_cuniculus
ENSHGLG00100018594	SNRNP200	100	90.169	ENSORLG00000012286	snrnp200	100	90.169	Oryzias_latipes
ENSHGLG00100018594	SNRNP200	100	90.215	ENSORLG00020004648	snrnp200	100	90.215	Oryzias_latipes_hni
ENSHGLG00100018594	SNRNP200	100	90.169	ENSORLG00015019114	snrnp200	100	90.185	Oryzias_latipes_hsok
ENSHGLG00100018594	SNRNP200	99	90.418	ENSOMEG00000011834	snrnp200	99	90.309	Oryzias_melastigma
ENSHGLG00100018594	SNRNP200	100	99.719	ENSOGAG00000006879	SNRNP200	100	99.719	Otolemur_garnettii
ENSHGLG00100018594	SNRNP200	100	98.456	ENSOARG00000013949	SNRNP200	100	98.456	Ovis_aries
ENSHGLG00100018594	SNRNP200	100	99.719	ENSPPAG00000041559	SNRNP200	100	99.719	Pan_paniscus
ENSHGLG00100018594	SNRNP200	100	99.719	ENSPPRG00000004435	SNRNP200	100	99.719	Panthera_pardus
ENSHGLG00100018594	SNRNP200	100	99.251	ENSPTIG00000006380	SNRNP200	100	99.251	Panthera_tigris_altaica
ENSHGLG00100018594	SNRNP200	100	99.719	ENSPTRG00000012230	SNRNP200	100	99.719	Pan_troglodytes
ENSHGLG00100018594	SNRNP200	100	99.766	ENSPANG00000006017	SNRNP200	100	99.766	Papio_anubis
ENSHGLG00100018594	SNRNP200	100	90.964	ENSPKIG00000014762	snrnp200	99	90.964	Paramormyrops_kingsleyae
ENSHGLG00100018594	SNRNP200	100	96.584	ENSPSIG00000008580	SNRNP200	100	96.584	Pelodiscus_sinensis
ENSHGLG00100018594	SNRNP200	100	98.783	ENSPCIG00000023050	SNRNP200	100	98.783	Phascolarctos_cinereus
ENSHGLG00100018594	SNRNP200	100	90.220	ENSPFOG00000015110	snrnp200	99	90.220	Poecilia_formosa
ENSHGLG00100018594	SNRNP200	97	90.055	ENSPLAG00000006711	snrnp200	99	90.055	Poecilia_latipinna
ENSHGLG00100018594	SNRNP200	97	90.000	ENSPMEG00000021166	snrnp200	99	90.000	Poecilia_mexicana
ENSHGLG00100018594	SNRNP200	100	90.309	ENSPREG00000008875	snrnp200	99	90.309	Poecilia_reticulata
ENSHGLG00100018594	SNRNP200	100	99.719	ENSPPYG00000012068	SNRNP200	100	99.719	Pongo_abelii
ENSHGLG00100018594	SNRNP200	97	97.436	ENSPCAG00000008536	SNRNP200	89	97.436	Procavia_capensis
ENSHGLG00100018594	SNRNP200	100	99.719	ENSPCOG00000024608	SNRNP200	100	99.719	Propithecus_coquereli
ENSHGLG00100018594	SNRNP200	96	100.000	ENSPVAG00000005860	SNRNP200	93	100.000	Pteropus_vampyrus
ENSHGLG00100018594	SNRNP200	99	85.902	ENSPNYG00000017476	snrnp200	99	85.808	Pundamilia_nyererei
ENSHGLG00100018594	SNRNP200	100	85.955	ENSPNAG00000010998	snrnp200	99	85.955	Pygocentrus_nattereri
ENSHGLG00100018594	SNRNP200	100	99.625	ENSRNOG00000012157	Snrnp200	100	99.625	Rattus_norvegicus
ENSHGLG00100018594	SNRNP200	100	99.719	ENSRBIG00000044690	-	100	99.719	Rhinopithecus_bieti
ENSHGLG00100018594	SNRNP200	100	99.719	ENSRROG00000037952	-	100	99.719	Rhinopithecus_roxellana
ENSHGLG00100018594	SNRNP200	100	99.672	ENSSBOG00000035471	SNRNP200	100	99.672	Saimiri_boliviensis_boliviensis
ENSHGLG00100018594	SNRNP200	97	98.694	ENSSHAG00000000758	SNRNP200	100	98.694	Sarcophilus_harrisii
ENSHGLG00100018594	SNRNP200	99	91.545	ENSSFOG00015018826	snrnp200	99	91.433	Scleropages_formosus
ENSHGLG00100018594	SNRNP200	99	90.324	ENSSMAG00000005463	snrnp200	99	90.215	Scophthalmus_maximus
ENSHGLG00100018594	SNRNP200	99	90.606	ENSSDUG00000021410	snrnp200	99	90.496	Seriola_dumerili
ENSHGLG00100018594	SNRNP200	99	90.559	ENSSLDG00000010884	snrnp200	99	90.449	Seriola_lalandi_dorsalis
ENSHGLG00100018594	SNRNP200	95	99.196	ENSSARG00000010728	SNRNP200	96	99.196	Sorex_araneus
ENSHGLG00100018594	SNRNP200	100	97.331	ENSSPUG00000003726	-	100	97.331	Sphenodon_punctatus
ENSHGLG00100018594	SNRNP200	99	90.653	ENSSPAG00000001842	snrnp200	99	90.543	Stegastes_partitus
ENSHGLG00100018594	SNRNP200	100	99.532	ENSSSCG00000008127	SNRNP200	100	99.532	Sus_scrofa
ENSHGLG00100018594	SNRNP200	99	87.914	ENSTGUG00000014475	-	100	87.914	Taeniopygia_guttata
ENSHGLG00100018594	SNRNP200	99	90.277	ENSTRUG00000001307	snrnp200	99	90.169	Takifugu_rubripes
ENSHGLG00100018594	SNRNP200	100	85.724	ENSTNIG00000004320	snrnp200	100	85.724	Tetraodon_nigroviridis
ENSHGLG00100018594	SNRNP200	82	100.000	ENSTBEG00000003329	-	67	100.000	Tupaia_belangeri
ENSHGLG00100018594	SNRNP200	100	99.345	ENSTTRG00000004983	SNRNP200	100	99.345	Tursiops_truncatus
ENSHGLG00100018594	SNRNP200	75	92.636	ENSUAMG00000008395	-	95	92.636	Ursus_americanus
ENSHGLG00100018594	SNRNP200	100	99.719	ENSUMAG00000012385	SNRNP200	100	99.719	Ursus_maritimus
ENSHGLG00100018594	SNRNP200	90	100.000	ENSVPAG00000006434	SNRNP200	69	100.000	Vicugna_pacos
ENSHGLG00100018594	SNRNP200	100	99.486	ENSVVUG00000026247	SNRNP200	100	99.486	Vulpes_vulpes
ENSHGLG00100018594	SNRNP200	100	94.250	ENSXETG00000001243	snrnp200	100	94.250	Xenopus_tropicalis
ENSHGLG00100018594	SNRNP200	97	90.310	ENSXMAG00000002058	snrnp200	98	90.310	Xiphophorus_maculatus