EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100018676 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 1502 bases
Position: chrJH166226.1:570953-572454
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100025461	SMN	PF06003.12	2.1e-97	1	1
ENSHGLP00100025462	SMN	PF06003.12	2.3e-97	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100025722	-	831	-	ENSHGLP00100025462	276 (aa)	-	-
ENSHGLT00100025721	-	813	-	ENSHGLP00100025461	270 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100018676's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100018676's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100018676	-	100	88.028	ENSHGLG00100011252	-	96	88.028

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100018676	-	100	78.014	ENSG00000172062	SMN1	99	77.778	Homo_sapiens
ENSHGLG00100018676	-	100	78.014	ENSG00000205571	SMN2	99	77.778	Homo_sapiens
ENSHGLG00100018676	-	96	51.866	ENSAPOG00000011324	smn1	92	50.000	Acanthochromis_polyacanthus
ENSHGLG00100018676	-	97	81.273	ENSAMEG00000003316	-	92	79.643	Ailuropoda_melanoleuca
ENSHGLG00100018676	-	94	45.818	ENSACIG00000019772	-	97	45.420	Amphilophus_citrinellus
ENSHGLG00100018676	-	96	47.619	ENSAOCG00000024444	smn1	92	47.368	Amphiprion_ocellaris
ENSHGLG00100018676	-	96	48.763	ENSAPEG00000016504	smn1	92	47.744	Amphiprion_percula
ENSHGLG00100018676	-	94	50.558	ENSATEG00000002182	smn1	79	49.057	Anabas_testudineus
ENSHGLG00100018676	-	71	55.729	ENSAPLG00000010912	-	94	55.729	Anas_platyrhynchos
ENSHGLG00100018676	-	96	53.612	ENSACAG00000010017	-	90	56.818	Anolis_carolinensis
ENSHGLG00100018676	-	99	76.364	ENSANAG00000032133	-	96	75.000	Aotus_nancymaae
ENSHGLG00100018676	-	96	47.761	ENSACLG00000007308	smn1	88	49.064	Astatotilapia_calliptera
ENSHGLG00100018676	-	51	49.007	ENSAMXG00000013884	smn1	93	47.388	Astyanax_mexicanus
ENSHGLG00100018676	-	97	77.239	ENSBTAG00000005743	SMN2	95	76.642	Bos_taurus
ENSHGLG00100018676	-	100	77.385	ENSCJAG00000016290	-	96	77.385	Callithrix_jacchus
ENSHGLG00100018676	-	97	80.150	ENSCAFG00000007812	SMN	96	78.571	Canis_familiaris
ENSHGLG00100018676	-	97	80.150	ENSCAFG00020019229	-	89	78.571	Canis_lupus_dingo
ENSHGLG00100018676	-	97	77.037	ENSCHIG00000015559	-	95	75.265	Capra_hircus
ENSHGLG00100018676	-	100	80.657	ENSTSYG00000012058	-	96	80.357	Carlito_syrichta
ENSHGLG00100018676	-	80	72.811	ENSCAPG00000011021	-	96	74.771	Cavia_aperea
ENSHGLG00100018676	-	99	83.099	ENSCPOG00000012328	-	96	83.099	Cavia_porcellus
ENSHGLG00100018676	-	100	84.173	ENSCPOG00000036973	-	96	84.173	Cavia_porcellus
ENSHGLG00100018676	-	100	77.224	ENSCCAG00000018127	-	96	77.224	Cebus_capucinus
ENSHGLG00100018676	-	100	78.369	ENSCATG00000037002	-	99	78.136	Cercocebus_atys
ENSHGLG00100018676	-	100	79.930	ENSCLAG00000000284	-	96	79.577	Chinchilla_lanigera
ENSHGLG00100018676	-	100	79.078	ENSCSAG00000015688	-	96	79.078	Chlorocebus_sabaeus
ENSHGLG00100018676	-	91	69.444	ENSCHOG00000007346	-	100	67.857	Choloepus_hoffmanni
ENSHGLG00100018676	-	96	60.300	ENSCPBG00000010968	-	94	61.328	Chrysemys_picta_bellii
ENSHGLG00100018676	-	99	73.993	ENSCANG00000033324	-	95	74.377	Colobus_angolensis_palliatus
ENSHGLG00100018676	-	100	79.643	ENSCANG00000038242	-	100	79.422	Colobus_angolensis_palliatus
ENSHGLG00100018676	-	100	58.696	ENSCGRG00001016998	-	95	59.058	Cricetulus_griseus_chok1gshd
ENSHGLG00100018676	-	100	76.157	ENSCGRG00001017959	-	96	76.157	Cricetulus_griseus_chok1gshd
ENSHGLG00100018676	-	100	76.157	ENSCGRG00000007698	Smn1	96	76.157	Cricetulus_griseus_crigri
ENSHGLG00100018676	-	96	46.953	ENSCSEG00000015227	smn1	95	47.445	Cynoglossus_semilaevis
ENSHGLG00100018676	-	96	49.455	ENSCVAG00000007498	smn1	93	47.794	Cyprinodon_variegatus
ENSHGLG00100018676	-	96	50.741	ENSDARG00000018494	smn1	93	51.986	Danio_rerio
ENSHGLG00100018676	-	83	79.825	ENSDNOG00000007283	-	95	79.825	Dasypus_novemcinctus
ENSHGLG00100018676	-	82	68.778	ENSDNOG00000045949	-	100	67.672	Dasypus_novemcinctus
ENSHGLG00100018676	-	100	70.000	ENSDORG00000007082	Smn1	97	70.397	Dipodomys_ordii
ENSHGLG00100018676	-	75	65.238	ENSETEG00000001406	-	100	65.238	Echinops_telfairi
ENSHGLG00100018676	-	97	38.514	ENSEBUG00000011902	smn1	94	39.583	Eptatretus_burgeri
ENSHGLG00100018676	-	94	73.764	ENSEASG00005018000	-	96	71.739	Equus_asinus_asinus
ENSHGLG00100018676	-	97	78.810	ENSECAG00000015215	-	96	77.660	Equus_caballus
ENSHGLG00100018676	-	91	73.092	ENSEEUG00000015777	-	100	73.092	Erinaceus_europaeus
ENSHGLG00100018676	-	96	50.909	ENSELUG00000018067	smn1	92	50.182	Esox_lucius
ENSHGLG00100018676	-	100	77.899	ENSFCAG00000028292	SMN	96	77.224	Felis_catus
ENSHGLG00100018676	-	93	57.647	ENSFALG00000012320	-	89	57.647	Ficedula_albicollis
ENSHGLG00100018676	-	100	85.915	ENSFDAG00000017683	-	96	85.915	Fukomys_damarensis
ENSHGLG00100018676	-	99	47.253	ENSGMOG00000017279	smn1	93	47.253	Gadus_morhua
ENSHGLG00100018676	-	96	56.274	ENSGALG00000002430	SMN	93	55.513	Gallus_gallus
ENSHGLG00100018676	-	96	50.752	ENSGAFG00000009501	smn1	92	46.296	Gambusia_affinis
ENSHGLG00100018676	-	96	49.049	ENSGACG00000010584	smn1	94	45.161	Gasterosteus_aculeatus
ENSHGLG00100018676	-	96	59.551	ENSGAGG00000011374	-	92	60.674	Gopherus_agassizii
ENSHGLG00100018676	-	100	66.429	ENSGGOG00000003872	-	100	69.203	Gorilla_gorilla
ENSHGLG00100018676	-	70	76.923	ENSGGOG00000026704	-	99	75.587	Gorilla_gorilla
ENSHGLG00100018676	-	96	48.289	ENSHBUG00000013987	smn1	92	49.434	Haplochromis_burtoni
ENSHGLG00100018676	-	100	88.028	ENSHGLG00000001018	-	96	88.028	Heterocephalus_glaber_female
ENSHGLG00100018676	-	100	100.000	ENSHGLG00000001905	-	96	100.000	Heterocephalus_glaber_female
ENSHGLG00100018676	-	94	44.853	ENSHCOG00000017136	smn1	87	47.566	Hippocampus_comes
ENSHGLG00100018676	-	96	50.368	ENSIPUG00000012580	smn1	82	50.916	Ictalurus_punctatus
ENSHGLG00100018676	-	99	79.422	ENSSTOG00000012288	-	100	79.422	Ictidomys_tridecemlineatus
ENSHGLG00100018676	-	63	60.819	ENSJJAG00000014853	-	100	60.638	Jaculus_jaculus
ENSHGLG00100018676	-	96	48.364	ENSKMAG00000007239	smn1	94	47.656	Kryptolebias_marmoratus
ENSHGLG00100018676	-	96	50.365	ENSLBEG00000022550	smn1	92	47.955	Labrus_bergylta
ENSHGLG00100018676	-	97	34.643	ENSLACG00000009808	-	89	36.691	Latimeria_chalumnae
ENSHGLG00100018676	-	90	34.630	ENSLOCG00000000801	-	83	30.147	Lepisosteus_oculatus
ENSHGLG00100018676	-	96	51.504	ENSLOCG00000011339	smn1	92	52.381	Lepisosteus_oculatus
ENSHGLG00100018676	-	100	78.092	ENSLAFG00000003425	-	92	78.092	Loxodonta_africana
ENSHGLG00100018676	-	100	79.078	ENSMFAG00000031523	SMN1	99	78.853	Macaca_fascicularis
ENSHGLG00100018676	-	100	74.113	ENSMFAG00000008812	-	96	74.113	Macaca_fascicularis
ENSHGLG00100018676	-	100	79.078	ENSMMUG00000020214	SMN1	99	78.853	Macaca_mulatta
ENSHGLG00100018676	-	100	73.404	ENSMMUG00000030594	-	96	73.404	Macaca_mulatta
ENSHGLG00100018676	-	77	66.351	ENSMNEG00000036423	-	82	66.351	Macaca_nemestrina
ENSHGLG00100018676	-	100	79.078	ENSMNEG00000035094	-	99	78.853	Macaca_nemestrina
ENSHGLG00100018676	-	100	79.078	ENSMLEG00000041902	-	99	78.853	Mandrillus_leucophaeus
ENSHGLG00100018676	-	96	48.162	ENSMAMG00000011034	smn1	92	47.778	Mastacembelus_armatus
ENSHGLG00100018676	-	96	47.080	ENSMZEG00005013634	smn1	92	48.905	Maylandia_zebra
ENSHGLG00100018676	-	71	54.450	ENSMGAG00000008889	-	92	53.403	Meleagris_gallopavo
ENSHGLG00100018676	-	100	74.733	ENSMAUG00000010262	Smn1	96	74.733	Mesocricetus_auratus
ENSHGLG00100018676	-	86	75.410	ENSMICG00000034708	-	93	75.714	Microcebus_murinus
ENSHGLG00100018676	-	100	74.733	ENSMOCG00000017833	Smn1	96	74.733	Microtus_ochrogaster
ENSHGLG00100018676	-	95	44.944	ENSMMOG00000005504	smn1	93	46.617	Mola_mola
ENSHGLG00100018676	-	100	62.774	ENSMODG00000001436	-	93	63.370	Monodelphis_domestica
ENSHGLG00100018676	-	96	47.426	ENSMALG00000008025	smn1	92	47.955	Monopterus_albus
ENSHGLG00100018676	-	100	75.532	MGP_CAROLIEiJ_G0018836	Smn1	96	75.532	Mus_caroli
ENSHGLG00100018676	-	100	74.823	ENSMUSG00000021645	Smn1	96	75.177	Mus_musculus
ENSHGLG00100018676	-	100	73.214	MGP_PahariEiJ_G0015911	Smn1	96	73.571	Mus_pahari
ENSHGLG00100018676	-	100	74.468	MGP_SPRETEiJ_G0019718	Smn1	96	74.823	Mus_spretus
ENSHGLG00100018676	-	99	81.919	ENSMPUG00000014470	-	98	80.935	Mustela_putorius_furo
ENSHGLG00100018676	-	97	77.818	ENSMLUG00000010603	-	92	76.042	Myotis_lucifugus
ENSHGLG00100018676	-	99	77.289	ENSNGAG00000019833	Smn1	94	77.289	Nannospalax_galili
ENSHGLG00100018676	-	96	45.421	ENSNBRG00000023000	smn1	92	48.375	Neolamprologus_brichardi
ENSHGLG00100018676	-	100	77.660	ENSNLEG00000004454	-	99	77.419	Nomascus_leucogenys
ENSHGLG00100018676	-	82	60.000	ENSMEUG00000011393	-	99	62.555	Notamacropus_eugenii
ENSHGLG00100018676	-	91	75.099	ENSOPRG00000002015	-	100	77.075	Ochotona_princeps
ENSHGLG00100018676	-	98	84.982	ENSODEG00000015976	-	97	84.982	Octodon_degus
ENSHGLG00100018676	-	96	44.727	ENSONIG00000011799	smn1	93	47.970	Oreochromis_niloticus
ENSHGLG00100018676	-	96	61.977	ENSOANG00000001626	-	92	63.670	Ornithorhynchus_anatinus
ENSHGLG00100018676	-	99	70.144	ENSOCUG00000025183	-	96	69.965	Oryctolagus_cuniculus
ENSHGLG00100018676	-	99	74.729	ENSOCUG00000026649	-	94	76.895	Oryctolagus_cuniculus
ENSHGLG00100018676	-	99	78.676	ENSOCUG00000017097	-	96	77.061	Oryctolagus_cuniculus
ENSHGLG00100018676	-	96	46.792	ENSORLG00000010552	smn1	92	47.566	Oryzias_latipes
ENSHGLG00100018676	-	96	48.659	ENSORLG00020007936	smn1	92	46.970	Oryzias_latipes_hni
ENSHGLG00100018676	-	56	55.484	ENSORLG00015022425	smn1	92	46.992	Oryzias_latipes_hsok
ENSHGLG00100018676	-	96	45.896	ENSOMEG00000007824	smn1	92	48.134	Oryzias_melastigma
ENSHGLG00100018676	-	96	71.111	ENSOGAG00000031414	-	97	70.357	Otolemur_garnettii
ENSHGLG00100018676	-	96	75.665	ENSOARG00000005425	-	96	75.665	Ovis_aries
ENSHGLG00100018676	-	100	77.660	ENSPPAG00000036640	-	99	77.419	Pan_paniscus
ENSHGLG00100018676	-	100	78.261	ENSPPRG00000005575	-	96	77.580	Panthera_pardus
ENSHGLG00100018676	-	100	77.978	ENSPTIG00000007745	-	96	77.305	Panthera_tigris_altaica
ENSHGLG00100018676	-	100	77.193	ENSPTRG00000016955	-	99	76.950	Pan_troglodytes
ENSHGLG00100018676	-	100	79.078	ENSPANG00000013601	-	96	79.078	Papio_anubis
ENSHGLG00100018676	-	100	73.050	ENSPANG00000000253	-	95	73.404	Papio_anubis
ENSHGLG00100018676	-	96	47.778	ENSPKIG00000011096	smn1	92	48.889	Paramormyrops_kingsleyae
ENSHGLG00100018676	-	93	59.375	ENSPSIG00000014787	-	81	58.755	Pelodiscus_sinensis
ENSHGLG00100018676	-	96	45.076	ENSPMGG00000012285	smn1	94	44.074	Periophthalmus_magnuspinnatus
ENSHGLG00100018676	-	99	41.304	ENSPMAG00000005004	smn1	94	41.935	Petromyzon_marinus
ENSHGLG00100018676	-	100	64.234	ENSPCIG00000025764	-	95	65.091	Phascolarctos_cinereus
ENSHGLG00100018676	-	96	50.752	ENSPFOG00000007786	smn1	92	47.037	Poecilia_formosa
ENSHGLG00100018676	-	96	51.128	ENSPLAG00000012071	smn1	92	47.407	Poecilia_latipinna
ENSHGLG00100018676	-	96	50.752	ENSPMEG00000017085	smn1	92	47.037	Poecilia_mexicana
ENSHGLG00100018676	-	96	51.880	ENSPREG00000005824	smn1	92	47.940	Poecilia_reticulata
ENSHGLG00100018676	-	91	49.597	ENSPPYG00000019189	-	99	50.000	Pongo_abelii
ENSHGLG00100018676	-	93	78.210	ENSPPYG00000015533	-	93	78.210	Pongo_abelii
ENSHGLG00100018676	-	92	74.708	ENSPCAG00000004187	-	96	74.708	Procavia_capensis
ENSHGLG00100018676	-	72	75.490	ENSPCOG00000022307	-	91	75.962	Propithecus_coquereli
ENSHGLG00100018676	-	100	79.286	ENSPVAG00000005977	-	96	79.286	Pteropus_vampyrus
ENSHGLG00100018676	-	96	45.421	ENSPNYG00000014148	smn1	92	48.375	Pundamilia_nyererei
ENSHGLG00100018676	-	96	45.196	ENSPNAG00000014007	smn1	81	47.253	Pygocentrus_nattereri
ENSHGLG00100018676	-	100	75.089	ENSRNOG00000018067	Smn1	95	75.089	Rattus_norvegicus
ENSHGLG00100018676	-	99	66.667	ENSRBIG00000036775	-	95	67.986	Rhinopithecus_bieti
ENSHGLG00100018676	-	100	79.078	ENSRBIG00000037052	-	96	79.078	Rhinopithecus_bieti
ENSHGLG00100018676	-	100	79.078	ENSRROG00000039399	-	99	78.853	Rhinopithecus_roxellana
ENSHGLG00100018676	-	100	63.958	ENSRROG00000031088	-	97	63.929	Rhinopithecus_roxellana
ENSHGLG00100018676	-	100	78.136	ENSSBOG00000011665	-	96	78.136	Saimiri_boliviensis_boliviensis
ENSHGLG00100018676	-	88	72.400	ENSSBOG00000020112	-	87	72.400	Saimiri_boliviensis_boliviensis
ENSHGLG00100018676	-	100	64.599	ENSSHAG00000001499	-	93	66.275	Sarcophilus_harrisii
ENSHGLG00100018676	-	96	47.368	ENSSFOG00015015507	smn1	92	49.815	Scleropages_formosus
ENSHGLG00100018676	-	96	48.507	ENSSMAG00000007922	smn1	92	45.283	Scophthalmus_maximus
ENSHGLG00100018676	-	96	47.122	ENSSDUG00000018533	smn1	92	46.269	Seriola_dumerili
ENSHGLG00100018676	-	96	47.482	ENSSLDG00000021135	smn1	92	46.642	Seriola_lalandi_dorsalis
ENSHGLG00100018676	-	95	61.977	ENSSPUG00000000373	-	91	63.258	Sphenodon_punctatus
ENSHGLG00100018676	-	96	45.390	ENSSPAG00000004345	smn1	92	48.134	Stegastes_partitus
ENSHGLG00100018676	-	74	52.000	ENSSSCG00000033865	-	89	53.000	Sus_scrofa
ENSHGLG00100018676	-	100	78.292	ENSSSCG00000016970	-	96	78.292	Sus_scrofa
ENSHGLG00100018676	-	97	61.509	ENSSSCG00000029127	-	92	60.000	Sus_scrofa
ENSHGLG00100018676	-	99	56.159	ENSTGUG00000001548	-	99	55.636	Taeniopygia_guttata
ENSHGLG00100018676	-	53	54.000	ENSTRUG00000000736	smn	94	47.388	Takifugu_rubripes
ENSHGLG00100018676	-	96	42.908	ENSTNIG00000009892	smn1	93	44.526	Tetraodon_nigroviridis
ENSHGLG00100018676	-	67	79.235	ENSTBEG00000002399	-	100	77.143	Tupaia_belangeri
ENSHGLG00100018676	-	97	76.316	ENSTTRG00000005080	-	96	75.089	Tursiops_truncatus
ENSHGLG00100018676	-	66	79.670	ENSUAMG00000024947	-	76	77.619	Ursus_americanus
ENSHGLG00100018676	-	97	82.022	ENSUMAG00000007842	-	71	80.357	Ursus_maritimus
ENSHGLG00100018676	-	96	69.318	ENSVPAG00000009887	-	100	68.345	Vicugna_pacos
ENSHGLG00100018676	-	97	80.150	ENSVVUG00000006934	-	96	78.571	Vulpes_vulpes
ENSHGLG00100018676	-	90	35.955	ENSXETG00000004912	-	78	66.667	Xenopus_tropicalis
ENSHGLG00100018676	-	97	54.779	ENSXETG00000018189	smn2	91	54.779	Xenopus_tropicalis
ENSHGLG00100018676	-	96	51.119	ENSXMAG00000001521	smn1	93	46.691	Xiphophorus_maculatus