EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00100018857 (Gene tree)
Gene ID: -
Gene Symbol: Srrt
Alias: -
Full Name: Heterocephalus glaber serrate%2C RNA effector molecule (Srrt)%2C mRNA.
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Plus strand
Length: 10083 bases
Position: chrJH167054.1:1003723-1013805
Accession: NM_001310221
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100025709	ARS2	PF04959.13	3.5e-91	1	1
ENSHGLP00100025708	ARS2	PF04959.13	4.7e-91	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100025973	-	1518	-	ENSHGLP00100025709	505 (aa)	-	-
ENSHGLT00100025972	-	2616	XM_021254180	ENSHGLP00100025708	871 (aa)	XP_021109839	-

Gene Model

Click here to download ENSHGLG00100018857's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100018857's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100018857	Srrt	100	98.280	ENSG00000087087	SRRT	99	100.000	Homo_sapiens
ENSHGLG00100018857	Srrt	89	72.727	ENSAPOG00000002304	srrt	96	64.971	Acanthochromis_polyacanthus
ENSHGLG00100018857	Srrt	100	94.000	ENSAMEG00000014506	SRRT	100	94.000	Ailuropoda_melanoleuca
ENSHGLG00100018857	Srrt	89	72.511	ENSACIG00000015795	srrt	85	75.758	Amphilophus_citrinellus
ENSHGLG00100018857	Srrt	93	58.932	ENSAOCG00000009189	-	96	56.185	Amphiprion_ocellaris
ENSHGLG00100018857	Srrt	89	72.944	ENSAOCG00000009693	srrt	85	76.190	Amphiprion_ocellaris
ENSHGLG00100018857	Srrt	89	72.511	ENSAPEG00000003646	srrt	96	65.006	Amphiprion_percula
ENSHGLG00100018857	Srrt	93	58.932	ENSAPEG00000020016	-	96	56.185	Amphiprion_percula
ENSHGLG00100018857	Srrt	94	57.374	ENSATEG00000003652	-	85	64.076	Anabas_testudineus
ENSHGLG00100018857	Srrt	89	70.346	ENSATEG00000014425	srrt	96	63.542	Anabas_testudineus
ENSHGLG00100018857	Srrt	95	77.143	ENSACAG00000001014	SRRT	96	77.096	Anolis_carolinensis
ENSHGLG00100018857	Srrt	100	97.374	ENSANAG00000031718	SRRT	100	97.374	Aotus_nancymaae
ENSHGLG00100018857	Srrt	89	71.212	ENSACLG00000013156	srrt	92	64.849	Astatotilapia_calliptera
ENSHGLG00100018857	Srrt	94	57.841	ENSACLG00000009423	-	96	55.351	Astatotilapia_calliptera
ENSHGLG00100018857	Srrt	88	72.648	ENSAMXG00000016671	srrt	93	64.557	Astyanax_mexicanus
ENSHGLG00100018857	Srrt	98	96.028	ENSBTAG00000001134	SRRT	98	96.028	Bos_taurus
ENSHGLG00100018857	Srrt	69	44.503	WBGene00017085	E01A2.2	85	42.857	Caenorhabditis_elegans
ENSHGLG00100018857	Srrt	100	96.918	ENSCJAG00000014917	SRRT	100	96.918	Callithrix_jacchus
ENSHGLG00100018857	Srrt	100	97.374	ENSCAFG00000023538	SRRT	100	97.374	Canis_familiaris
ENSHGLG00100018857	Srrt	100	97.936	ENSCAFG00020013358	SRRT	100	97.936	Canis_lupus_dingo
ENSHGLG00100018857	Srrt	100	96.461	ENSCHIG00000010495	SRRT	100	96.461	Capra_hircus
ENSHGLG00100018857	Srrt	100	94.757	ENSTSYG00000036426	SRRT	99	94.231	Carlito_syrichta
ENSHGLG00100018857	Srrt	95	97.473	ENSCAPG00000013586	SRRT	100	97.473	Cavia_aperea
ENSHGLG00100018857	Srrt	100	98.176	ENSCPOG00000001739	SRRT	100	98.176	Cavia_porcellus
ENSHGLG00100018857	Srrt	100	97.374	ENSCCAG00000015877	SRRT	100	97.374	Cebus_capucinus
ENSHGLG00100018857	Srrt	100	97.706	ENSCATG00000036306	SRRT	100	97.706	Cercocebus_atys
ENSHGLG00100018857	Srrt	100	98.402	ENSCLAG00000007568	SRRT	100	98.402	Chinchilla_lanigera
ENSHGLG00100018857	Srrt	100	97.374	ENSCSAG00000017996	SRRT	100	97.374	Chlorocebus_sabaeus
ENSHGLG00100018857	Srrt	56	94.083	ENSCHOG00000007815	SRRT	67	94.083	Choloepus_hoffmanni
ENSHGLG00100018857	Srrt	74	81.992	ENSCPBG00000011553	SRRT	83	81.955	Chrysemys_picta_bellii
ENSHGLG00100018857	Srrt	98	47.538	ENSCING00000003506	-	54	52.292	Ciona_intestinalis
ENSHGLG00100018857	Srrt	99	44.134	ENSCSAVG00000008394	-	81	54.039	Ciona_savignyi
ENSHGLG00100018857	Srrt	100	97.821	ENSCANG00000034556	SRRT	100	97.821	Colobus_angolensis_palliatus
ENSHGLG00100018857	Srrt	100	96.128	ENSCGRG00001001594	Srrt	100	96.128	Cricetulus_griseus_chok1gshd
ENSHGLG00100018857	Srrt	100	94.757	ENSCGRG00000007292	Srrt	100	94.757	Cricetulus_griseus_crigri
ENSHGLG00100018857	Srrt	89	68.132	ENSCSEG00000017878	srrt	50	69.011	Cynoglossus_semilaevis
ENSHGLG00100018857	Srrt	94	56.762	ENSCSEG00000005233	-	54	60.043	Cynoglossus_semilaevis
ENSHGLG00100018857	Srrt	99	65.524	ENSCVAG00000019848	srrt	96	64.005	Cyprinodon_variegatus
ENSHGLG00100018857	Srrt	90	54.962	ENSCVAG00000017344	-	95	55.583	Cyprinodon_variegatus
ENSHGLG00100018857	Srrt	89	73.434	ENSDARG00000017762	srrt	96	66.629	Danio_rerio
ENSHGLG00100018857	Srrt	100	97.260	ENSDNOG00000003851	SRRT	100	97.260	Dasypus_novemcinctus
ENSHGLG00100018857	Srrt	98	93.364	ENSDORG00000005584	Srrt	100	93.992	Dipodomys_ordii
ENSHGLG00100018857	Srrt	96	46.062	FBgn0033062	Ars2	67	53.277	Drosophila_melanogaster
ENSHGLG00100018857	Srrt	90	91.213	ENSETEG00000016175	SRRT	82	92.857	Echinops_telfairi
ENSHGLG00100018857	Srrt	89	59.565	ENSEBUG00000008517	-	76	63.889	Eptatretus_burgeri
ENSHGLG00100018857	Srrt	100	97.146	ENSEASG00005016956	SRRT	100	97.146	Equus_asinus_asinus
ENSHGLG00100018857	Srrt	100	97.260	ENSECAG00000012292	SRRT	100	97.260	Equus_caballus
ENSHGLG00100018857	Srrt	85	97.727	ENSEEUG00000009117	SRRT	93	97.727	Erinaceus_europaeus
ENSHGLG00100018857	Srrt	89	71.828	ENSELUG00000006651	srrt	96	65.095	Esox_lucius
ENSHGLG00100018857	Srrt	89	59.916	ENSELUG00000021216	-	96	53.941	Esox_lucius
ENSHGLG00100018857	Srrt	100	97.489	ENSFCAG00000006855	SRRT	100	97.489	Felis_catus
ENSHGLG00100018857	Srrt	57	54.605	ENSFALG00000007524	-	78	79.630	Ficedula_albicollis
ENSHGLG00100018857	Srrt	100	94.839	ENSFDAG00000021347	SRRT	100	94.839	Fukomys_damarensis
ENSHGLG00100018857	Srrt	90	68.017	ENSFHEG00000002756	srrt	89	74.458	Fundulus_heteroclitus
ENSHGLG00100018857	Srrt	93	55.852	ENSFHEG00000004105	-	93	56.838	Fundulus_heteroclitus
ENSHGLG00100018857	Srrt	95	62.341	ENSGMOG00000018619	srrt	96	61.653	Gadus_morhua
ENSHGLG00100018857	Srrt	86	59.645	ENSGMOG00000018694	-	98	51.724	Gadus_morhua
ENSHGLG00100018857	Srrt	89	71.429	ENSGAFG00000005423	srrt	96	63.879	Gambusia_affinis
ENSHGLG00100018857	Srrt	93	53.742	ENSGAFG00000020383	-	96	54.675	Gambusia_affinis
ENSHGLG00100018857	Srrt	95	68.889	ENSGACG00000020387	srrt	96	62.785	Gasterosteus_aculeatus
ENSHGLG00100018857	Srrt	94	54.878	ENSGACG00000001100	-	96	53.502	Gasterosteus_aculeatus
ENSHGLG00100018857	Srrt	100	97.717	ENSGGOG00000001508	SRRT	99	97.717	Gorilla_gorilla
ENSHGLG00100018857	Srrt	89	71.429	ENSHBUG00000002942	srrt	92	64.965	Haplochromis_burtoni
ENSHGLG00100018857	Srrt	100	99.088	ENSHGLG00000008344	Srrt	100	99.088	Heterocephalus_glaber_female
ENSHGLG00100018857	Srrt	90	57.602	ENSHCOG00000008904	-	95	53.333	Hippocampus_comes
ENSHGLG00100018857	Srrt	98	62.976	ENSHCOG00000005403	srrt	96	63.082	Hippocampus_comes
ENSHGLG00100018857	Srrt	89	73.060	ENSIPUG00000021150	srrt	96	66.705	Ictalurus_punctatus
ENSHGLG00100018857	Srrt	100	98.050	ENSSTOG00000013776	SRRT	100	98.050	Ictidomys_tridecemlineatus
ENSHGLG00100018857	Srrt	100	95.986	ENSJJAG00000010446	Srrt	100	95.986	Jaculus_jaculus
ENSHGLG00100018857	Srrt	94	56.634	ENSKMAG00000008468	-	96	55.006	Kryptolebias_marmoratus
ENSHGLG00100018857	Srrt	94	69.008	ENSKMAG00000013599	srrt	96	64.277	Kryptolebias_marmoratus
ENSHGLG00100018857	Srrt	96	64.630	ENSLBEG00000016308	srrt	81	76.509	Labrus_bergylta
ENSHGLG00100018857	Srrt	95	64.466	ENSLACG00000001089	SRRT	96	64.782	Latimeria_chalumnae
ENSHGLG00100018857	Srrt	89	65.784	ENSLOCG00000013658	srrt	52	69.264	Lepisosteus_oculatus
ENSHGLG00100018857	Srrt	100	97.257	ENSLAFG00000007725	SRRT	100	97.257	Loxodonta_africana
ENSHGLG00100018857	Srrt	100	97.936	ENSMFAG00000033745	SRRT	100	97.936	Macaca_fascicularis
ENSHGLG00100018857	Srrt	100	97.374	ENSMMUG00000021255	SRRT	100	97.374	Macaca_mulatta
ENSHGLG00100018857	Srrt	100	97.374	ENSMNEG00000041864	SRRT	100	97.374	Macaca_nemestrina
ENSHGLG00100018857	Srrt	100	97.936	ENSMLEG00000029479	SRRT	100	97.936	Mandrillus_leucophaeus
ENSHGLG00100018857	Srrt	89	70.282	ENSMAMG00000014311	srrt	96	65.734	Mastacembelus_armatus
ENSHGLG00100018857	Srrt	94	58.248	ENSMAMG00000010681	-	96	56.879	Mastacembelus_armatus
ENSHGLG00100018857	Srrt	94	57.841	ENSMZEG00005028002	-	96	55.696	Maylandia_zebra
ENSHGLG00100018857	Srrt	89	71.212	ENSMZEG00005016135	srrt	92	64.849	Maylandia_zebra
ENSHGLG00100018857	Srrt	100	93.992	ENSMAUG00000011386	Srrt	100	93.992	Mesocricetus_auratus
ENSHGLG00100018857	Srrt	100	97.260	ENSMICG00000009471	SRRT	100	97.260	Microcebus_murinus
ENSHGLG00100018857	Srrt	100	95.890	ENSMOCG00000001971	Srrt	100	95.890	Microtus_ochrogaster
ENSHGLG00100018857	Srrt	89	62.661	ENSMMOG00000011137	-	55	65.880	Mola_mola
ENSHGLG00100018857	Srrt	95	67.335	ENSMMOG00000016399	srrt	96	64.218	Mola_mola
ENSHGLG00100018857	Srrt	90	84.874	ENSMODG00000004862	SRRT	90	88.981	Monodelphis_domestica
ENSHGLG00100018857	Srrt	89	66.811	ENSMALG00000018604	srrt	80	71.150	Monopterus_albus
ENSHGLG00100018857	Srrt	99	50.699	ENSMALG00000005567	-	84	53.097	Monopterus_albus
ENSHGLG00100018857	Srrt	100	96.119	MGP_CAROLIEiJ_G0027870	Srrt	100	99.254	Mus_caroli
ENSHGLG00100018857	Srrt	100	96.119	ENSMUSG00000037364	Srrt	99	99.254	Mus_musculus
ENSHGLG00100018857	Srrt	100	96.119	MGP_PahariEiJ_G0024456	Srrt	100	98.881	Mus_pahari
ENSHGLG00100018857	Srrt	100	96.119	MGP_SPRETEiJ_G0028875	Srrt	100	99.254	Mus_spretus
ENSHGLG00100018857	Srrt	100	97.260	ENSMPUG00000015839	SRRT	100	97.260	Mustela_putorius_furo
ENSHGLG00100018857	Srrt	100	96.689	ENSMLUG00000009975	SRRT	100	96.689	Myotis_lucifugus
ENSHGLG00100018857	Srrt	100	96.575	ENSNGAG00000023715	Srrt	100	96.575	Nannospalax_galili
ENSHGLG00100018857	Srrt	89	70.652	ENSNBRG00000019100	srrt	96	63.201	Neolamprologus_brichardi
ENSHGLG00100018857	Srrt	95	88.378	ENSNLEG00000011987	SRRT	99	88.250	Nomascus_leucogenys
ENSHGLG00100018857	Srrt	98	74.476	ENSMEUG00000011941	SRRT	98	73.193	Notamacropus_eugenii
ENSHGLG00100018857	Srrt	82	87.740	ENSOPRG00000002502	-	67	100.000	Ochotona_princeps
ENSHGLG00100018857	Srrt	100	98.814	ENSODEG00000016856	SRRT	100	98.814	Octodon_degus
ENSHGLG00100018857	Srrt	94	57.895	ENSONIG00000016080	-	94	55.112	Oreochromis_niloticus
ENSHGLG00100018857	Srrt	89	71.645	ENSONIG00000004242	srrt	92	65.661	Oreochromis_niloticus
ENSHGLG00100018857	Srrt	94	69.008	ENSORLG00000008120	srrt	96	65.192	Oryzias_latipes
ENSHGLG00100018857	Srrt	92	69.538	ENSORLG00020003058	srrt	96	65.192	Oryzias_latipes_hni
ENSHGLG00100018857	Srrt	94	68.802	ENSORLG00015008062	srrt	96	65.076	Oryzias_latipes_hsok
ENSHGLG00100018857	Srrt	93	56.916	ENSOMEG00000006963	-	96	56.789	Oryzias_melastigma
ENSHGLG00100018857	Srrt	96	66.705	ENSOMEG00000003155	srrt	87	74.242	Oryzias_melastigma
ENSHGLG00100018857	Srrt	100	97.603	ENSOGAG00000017242	SRRT	100	97.603	Otolemur_garnettii
ENSHGLG00100018857	Srrt	100	97.018	ENSOARG00000015645	SRRT	100	97.018	Ovis_aries
ENSHGLG00100018857	Srrt	100	98.165	ENSPPAG00000041090	SRRT	100	98.165	Pan_paniscus
ENSHGLG00100018857	Srrt	100	97.477	ENSPPRG00000009557	SRRT	100	97.477	Panthera_pardus
ENSHGLG00100018857	Srrt	100	97.374	ENSPTIG00000014355	SRRT	100	97.374	Panthera_tigris_altaica
ENSHGLG00100018857	Srrt	100	98.165	ENSPTRG00000019511	SRRT	100	98.165	Pan_troglodytes
ENSHGLG00100018857	Srrt	100	92.979	ENSPANG00000020763	SRRT	98	94.884	Papio_anubis
ENSHGLG00100018857	Srrt	89	72.511	ENSPKIG00000022212	-	96	66.980	Paramormyrops_kingsleyae
ENSHGLG00100018857	Srrt	96	71.831	ENSPKIG00000005434	srrt	96	67.537	Paramormyrops_kingsleyae
ENSHGLG00100018857	Srrt	100	80.268	ENSPSIG00000016311	SRRT	96	80.924	Pelodiscus_sinensis
ENSHGLG00100018857	Srrt	89	71.429	ENSPMGG00000002841	srrt	56	74.459	Periophthalmus_magnuspinnatus
ENSHGLG00100018857	Srrt	100	96.245	ENSPEMG00000010834	Srrt	100	96.245	Peromyscus_maniculatus_bairdii
ENSHGLG00100018857	Srrt	99	58.541	ENSPMAG00000009614	-	55	64.496	Petromyzon_marinus
ENSHGLG00100018857	Srrt	98	89.895	ENSPCIG00000000816	SRRT	98	90.941	Phascolarctos_cinereus
ENSHGLG00100018857	Srrt	89	71.490	ENSPFOG00000005704	srrt	96	64.037	Poecilia_formosa
ENSHGLG00100018857	Srrt	93	53.186	ENSPFOG00000016554	-	96	53.901	Poecilia_formosa
ENSHGLG00100018857	Srrt	89	71.212	ENSPLAG00000021992	srrt	96	63.741	Poecilia_latipinna
ENSHGLG00100018857	Srrt	93	52.876	ENSPLAG00000004526	-	96	53.828	Poecilia_latipinna
ENSHGLG00100018857	Srrt	89	71.058	ENSPMEG00000001182	srrt	96	63.805	Poecilia_mexicana
ENSHGLG00100018857	Srrt	90	52.339	ENSPMEG00000001520	-	95	53.106	Poecilia_mexicana
ENSHGLG00100018857	Srrt	89	71.490	ENSPREG00000022308	srrt	96	64.037	Poecilia_reticulata
ENSHGLG00100018857	Srrt	100	87.329	ENSPPYG00000017432	SRRT	100	87.329	Pongo_abelii
ENSHGLG00100018857	Srrt	100	92.760	ENSPCAG00000001621	SRRT	100	92.760	Procavia_capensis
ENSHGLG00100018857	Srrt	100	97.489	ENSPCOG00000025751	SRRT	100	97.489	Propithecus_coquereli
ENSHGLG00100018857	Srrt	100	88.825	ENSPVAG00000000834	SRRT	100	89.559	Pteropus_vampyrus
ENSHGLG00100018857	Srrt	89	71.212	ENSPNYG00000018710	srrt	96	64.849	Pundamilia_nyererei
ENSHGLG00100018857	Srrt	81	71.077	ENSPNAG00000010629	srrt	95	53.681	Pygocentrus_nattereri
ENSHGLG00100018857	Srrt	91	85.897	ENSRNOG00000048277	AABR07035787.1	93	85.897	Rattus_norvegicus
ENSHGLG00100018857	Srrt	100	97.374	ENSRBIG00000035718	SRRT	100	97.374	Rhinopithecus_bieti
ENSHGLG00100018857	Srrt	100	97.374	ENSRROG00000030622	SRRT	100	97.374	Rhinopithecus_roxellana
ENSHGLG00100018857	Srrt	100	97.374	ENSSBOG00000033570	SRRT	100	97.374	Saimiri_boliviensis_boliviensis
ENSHGLG00100018857	Srrt	93	87.474	ENSSHAG00000007349	-	100	85.669	Sarcophilus_harrisii
ENSHGLG00100018857	Srrt	90	75.699	ENSSFOG00015017293	srrt	96	68.078	Scleropages_formosus
ENSHGLG00100018857	Srrt	95	64.747	ENSSMAG00000015342	srrt	96	65.070	Scophthalmus_maximus
ENSHGLG00100018857	Srrt	89	57.749	ENSSMAG00000018195	-	95	52.824	Scophthalmus_maximus
ENSHGLG00100018857	Srrt	89	71.429	ENSSDUG00000012049	srrt	96	65.064	Seriola_dumerili
ENSHGLG00100018857	Srrt	92	53.608	ENSSDUG00000002051	-	93	55.106	Seriola_dumerili
ENSHGLG00100018857	Srrt	89	71.212	ENSSLDG00000017477	srrt	81	75.325	Seriola_lalandi_dorsalis
ENSHGLG00100018857	Srrt	89	71.613	ENSSPAG00000005665	srrt	94	65.278	Stegastes_partitus
ENSHGLG00100018857	Srrt	89	55.895	ENSSPAG00000018943	-	95	55.864	Stegastes_partitus
ENSHGLG00100018857	Srrt	95	94.800	ENSSSCG00000024789	SRRT	100	94.800	Sus_scrofa
ENSHGLG00100018857	Srrt	96	64.554	ENSTRUG00000016075	srrt	96	64.665	Takifugu_rubripes
ENSHGLG00100018857	Srrt	89	55.292	ENSTRUG00000000023	-	94	54.358	Takifugu_rubripes
ENSHGLG00100018857	Srrt	64	57.692	ENSTNIG00000019765	-	95	64.038	Tetraodon_nigroviridis
ENSHGLG00100018857	Srrt	95	54.637	ENSTNIG00000003111	-	96	53.410	Tetraodon_nigroviridis
ENSHGLG00100018857	Srrt	89	70.299	ENSTNIG00000011779	srrt	100	62.222	Tetraodon_nigroviridis
ENSHGLG00100018857	Srrt	82	92.141	ENSTBEG00000005212	SRRT	66	96.875	Tupaia_belangeri
ENSHGLG00100018857	Srrt	100	96.461	ENSTTRG00000011104	SRRT	100	96.461	Tursiops_truncatus
ENSHGLG00100018857	Srrt	95	97.249	ENSUAMG00000027997	SRRT	98	97.249	Ursus_americanus
ENSHGLG00100018857	Srrt	100	97.374	ENSUMAG00000011295	SRRT	100	97.374	Ursus_maritimus
ENSHGLG00100018857	Srrt	100	97.374	ENSVVUG00000023572	SRRT	100	97.374	Vulpes_vulpes
ENSHGLG00100018857	Srrt	89	72.318	ENSXETG00000025124	srrt	72	81.366	Xenopus_tropicalis
ENSHGLG00100018857	Srrt	89	52.088	ENSXCOG00000013105	-	90	52.308	Xiphophorus_couchianus
ENSHGLG00100018857	Srrt	93	53.620	ENSXMAG00000002090	-	96	54.235	Xiphophorus_maculatus
ENSHGLG00100018857	Srrt	89	71.861	ENSXMAG00000007627	srrt	96	64.344	Xiphophorus_maculatus