EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100019378 (Gene tree)
Gene ID: -
Gene Symbol: SRL
Alias: SAR
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 39374 bases
Position: chrJH172716.1:217466-256839
Accession: 101701696
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100026432	MMR_HSR1	PF01926.23	9.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100026700	SRL-201	1419	XM_013065536	ENSHGLP00100026432	472 (aa)	XP_012920990	-

Gene Model

Click here to download ENSHGLG00100019378's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100019378's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100019378	SRL	77	33.699	ENSHGLG00100014206	EHD1	67	33.699
ENSHGLG00100019378	SRL	82	32.648	ENSHGLG00100017344	EHD2	68	32.812
ENSHGLG00100019378	SRL	74	33.714	ENSHGLG00100011636	EHD3	67	33.875

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100019378	SRL	100	97.040	ENSG00000185739	SRL	100	98.608	Homo_sapiens
ENSHGLG00100019378	SRL	94	76.697	ENSAPOG00000012432	SRL	98	75.168	Acanthochromis_polyacanthus
ENSHGLG00100019378	SRL	100	81.144	ENSAPOG00000018093	srl	100	83.784	Acanthochromis_polyacanthus
ENSHGLG00100019378	SRL	98	97.403	ENSAMEG00000010862	SRL	52	97.403	Ailuropoda_melanoleuca
ENSHGLG00100019378	SRL	96	82.965	ENSACIG00000015799	srl	99	82.965	Amphilophus_citrinellus
ENSHGLG00100019378	SRL	94	75.225	ENSACIG00000015419	SRL	99	75.225	Amphilophus_citrinellus
ENSHGLG00100019378	SRL	96	74.781	ENSAOCG00000017049	SRL	99	74.781	Amphiprion_ocellaris
ENSHGLG00100019378	SRL	92	84.562	ENSAOCG00000007574	srl	100	84.562	Amphiprion_ocellaris
ENSHGLG00100019378	SRL	96	70.989	ENSAPEG00000006533	SRL	99	70.989	Amphiprion_percula
ENSHGLG00100019378	SRL	100	81.356	ENSAPEG00000006911	srl	96	83.186	Amphiprion_percula
ENSHGLG00100019378	SRL	100	81.144	ENSATEG00000024315	srl	97	82.637	Anabas_testudineus
ENSHGLG00100019378	SRL	94	73.846	ENSATEG00000009643	SRL	52	72.747	Anabas_testudineus
ENSHGLG00100019378	SRL	100	86.475	ENSACAG00000016380	SRL	85	89.655	Anolis_carolinensis
ENSHGLG00100019378	SRL	94	72.747	ENSACLG00000024674	SRL	57	71.648	Astatotilapia_calliptera
ENSHGLG00100019378	SRL	98	82.151	ENSACLG00000027685	srl	98	83.111	Astatotilapia_calliptera
ENSHGLG00100019378	SRL	88	78.072	ENSAMXG00000038693	SRL	100	73.731	Astyanax_mexicanus
ENSHGLG00100019378	SRL	99	80.679	ENSAMXG00000018789	srl	86	84.354	Astyanax_mexicanus
ENSHGLG00100019378	SRL	96	96.909	ENSBTAG00000001078	SRL	57	96.909	Bos_taurus
ENSHGLG00100019378	SRL	100	97.040	ENSCJAG00000019750	SRL	100	97.040	Callithrix_jacchus
ENSHGLG00100019378	SRL	97	97.609	ENSCAFG00000019233	SRL	84	98.451	Canis_familiaris
ENSHGLG00100019378	SRL	96	98.022	ENSCAFG00020025024	SRL	56	98.022	Canis_lupus_dingo
ENSHGLG00100019378	SRL	99	95.699	ENSCHIG00000017927	SRL	57	96.909	Capra_hircus
ENSHGLG00100019378	SRL	100	98.309	ENSTSYG00000007919	SRL	100	99.536	Carlito_syrichta
ENSHGLG00100019378	SRL	100	98.517	ENSCPOG00000012643	SRL	100	98.517	Cavia_porcellus
ENSHGLG00100019378	SRL	94	92.099	ENSCCAG00000032646	SRL	100	98.681	Cebus_capucinus
ENSHGLG00100019378	SRL	100	97.252	ENSCATG00000032227	-	100	97.252	Cercocebus_atys
ENSHGLG00100019378	SRL	100	98.729	ENSCLAG00000016242	SRL	100	98.729	Chinchilla_lanigera
ENSHGLG00100019378	SRL	82	97.662	ENSCHOG00000001618	SRL	52	97.662	Choloepus_hoffmanni
ENSHGLG00100019378	SRL	96	93.782	ENSCPBG00000026371	SRL	95	89.849	Chrysemys_picta_bellii
ENSHGLG00100019378	SRL	88	60.432	ENSCING00000005231	-	91	60.591	Ciona_intestinalis
ENSHGLG00100019378	SRL	100	97.252	ENSCANG00000035872	SRL	100	98.608	Colobus_angolensis_palliatus
ENSHGLG00100019378	SRL	100	98.729	ENSCGRG00001016630	Srl	100	98.729	Cricetulus_griseus_chok1gshd
ENSHGLG00100019378	SRL	100	98.729	ENSCGRG00000005458	Srl	100	98.729	Cricetulus_griseus_crigri
ENSHGLG00100019378	SRL	100	81.780	ENSCSEG00000016151	srl	97	82.819	Cynoglossus_semilaevis
ENSHGLG00100019378	SRL	99	70.464	ENSCSEG00000011866	SRL	92	71.930	Cynoglossus_semilaevis
ENSHGLG00100019378	SRL	100	81.568	ENSCVAG00000003513	srl	96	84.389	Cyprinodon_variegatus
ENSHGLG00100019378	SRL	94	75.000	ENSCVAG00000022465	SRL	60	74.115	Cyprinodon_variegatus
ENSHGLG00100019378	SRL	80	77.083	ENSDARG00000112959	CABZ01072309.1	100	77.083	Danio_rerio
ENSHGLG00100019378	SRL	100	82.415	ENSDARG00000104587	srl	96	84.222	Danio_rerio
ENSHGLG00100019378	SRL	96	97.577	ENSDNOG00000011643	SRL	54	97.577	Dasypus_novemcinctus
ENSHGLG00100019378	SRL	100	97.881	ENSDORG00000014807	Srl	100	97.881	Dipodomys_ordii
ENSHGLG00100019378	SRL	78	65.508	ENSEBUG00000015937	srl	88	67.816	Eptatretus_burgeri
ENSHGLG00100019378	SRL	96	97.351	ENSEASG00005000942	SRL	55	97.351	Equus_asinus_asinus
ENSHGLG00100019378	SRL	99	96.822	ENSECAG00000024219	SRL	96	97.363	Equus_caballus
ENSHGLG00100019378	SRL	100	77.823	ENSELUG00000015616	srl	97	78.936	Esox_lucius
ENSHGLG00100019378	SRL	100	96.829	ENSFCAG00000022075	SRL	100	96.829	Felis_catus
ENSHGLG00100019378	SRL	96	90.949	ENSFALG00000004328	SRL	64	91.353	Ficedula_albicollis
ENSHGLG00100019378	SRL	100	99.153	ENSFDAG00000006199	SRL	100	99.153	Fukomys_damarensis
ENSHGLG00100019378	SRL	100	70.697	ENSFHEG00000011854	SRL	98	76.471	Fundulus_heteroclitus
ENSHGLG00100019378	SRL	100	80.508	ENSFHEG00000011239	srl	97	81.938	Fundulus_heteroclitus
ENSHGLG00100019378	SRL	93	81.457	ENSGMOG00000014954	srl	99	81.457	Gadus_morhua
ENSHGLG00100019378	SRL	99	89.172	ENSGALG00000038884	SRL	96	90.088	Gallus_gallus
ENSHGLG00100019378	SRL	100	80.932	ENSGAFG00000000010	srl	97	83.596	Gambusia_affinis
ENSHGLG00100019378	SRL	94	76.471	ENSGAFG00000016984	SRL	98	76.471	Gambusia_affinis
ENSHGLG00100019378	SRL	93	81.678	ENSGACG00000011332	srl	99	81.678	Gasterosteus_aculeatus
ENSHGLG00100019378	SRL	100	96.829	ENSGGOG00000011312	-	100	96.829	Gorilla_gorilla
ENSHGLG00100019378	SRL	98	82.151	ENSHBUG00000007581	srl	98	83.111	Haplochromis_burtoni
ENSHGLG00100019378	SRL	94	72.527	ENSHBUG00000015710	SRL	57	72.527	Haplochromis_burtoni
ENSHGLG00100019378	SRL	100	100.000	ENSHGLG00000015271	SRL	100	100.000	Heterocephalus_glaber_female
ENSHGLG00100019378	SRL	99	80.213	ENSHCOG00000008687	srl	98	83.258	Hippocampus_comes
ENSHGLG00100019378	SRL	94	72.627	ENSHCOG00000001012	SRL	50	71.523	Hippocampus_comes
ENSHGLG00100019378	SRL	92	70.413	ENSIPUG00000011609	SRL	95	69.266	Ictalurus_punctatus
ENSHGLG00100019378	SRL	100	80.085	ENSIPUG00000012513	srl	96	81.678	Ictalurus_punctatus
ENSHGLG00100019378	SRL	100	98.305	ENSSTOG00000021151	-	100	98.305	Ictidomys_tridecemlineatus
ENSHGLG00100019378	SRL	100	97.881	ENSJJAG00000016400	Srl	100	97.881	Jaculus_jaculus
ENSHGLG00100019378	SRL	98	80.952	ENSKMAG00000014115	srl	93	85.511	Kryptolebias_marmoratus
ENSHGLG00100019378	SRL	93	76.644	ENSKMAG00000019537	SRL	100	76.644	Kryptolebias_marmoratus
ENSHGLG00100019378	SRL	96	74.561	ENSLBEG00000013811	SRL	98	74.342	Labrus_bergylta
ENSHGLG00100019378	SRL	100	81.144	ENSLBEG00000026643	srl	96	82.198	Labrus_bergylta
ENSHGLG00100019378	SRL	96	86.062	ENSLACG00000002825	SRL	99	86.062	Latimeria_chalumnae
ENSHGLG00100019378	SRL	99	83.156	ENSLOCG00000002644	srl	96	84.956	Lepisosteus_oculatus
ENSHGLG00100019378	SRL	96	97.566	ENSLAFG00000006329	SRL	51	97.566	Loxodonta_africana
ENSHGLG00100019378	SRL	91	98.608	ENSMFAG00000037383	SRL	100	98.608	Macaca_fascicularis
ENSHGLG00100019378	SRL	98	96.746	ENSMNEG00000019236	-	97	96.746	Macaca_nemestrina
ENSHGLG00100019378	SRL	100	89.429	ENSMLEG00000032156	SRL	100	89.429	Mandrillus_leucophaeus
ENSHGLG00100019378	SRL	93	74.009	ENSMAMG00000013756	SRL	53	73.904	Mastacembelus_armatus
ENSHGLG00100019378	SRL	99	80.000	ENSMAMG00000023322	srl	94	83.937	Mastacembelus_armatus
ENSHGLG00100019378	SRL	94	72.747	ENSMZEG00005004010	SRL	57	71.648	Maylandia_zebra
ENSHGLG00100019378	SRL	98	82.151	ENSMZEG00005004548	srl	98	83.111	Maylandia_zebra
ENSHGLG00100019378	SRL	96	90.687	ENSMGAG00000009342	SRL	95	92.287	Meleagris_gallopavo
ENSHGLG00100019378	SRL	100	96.406	ENSMICG00000032307	SRL	100	96.406	Microcebus_murinus
ENSHGLG00100019378	SRL	100	97.881	ENSMOCG00000008208	Srl	100	97.881	Microtus_ochrogaster
ENSHGLG00100019378	SRL	93	73.407	ENSMMOG00000021572	SRL	99	73.407	Mola_mola
ENSHGLG00100019378	SRL	94	83.710	ENSMMOG00000013970	srl	98	83.710	Mola_mola
ENSHGLG00100019378	SRL	96	96.909	ENSMODG00000016380	-	51	96.909	Monodelphis_domestica
ENSHGLG00100019378	SRL	100	80.761	ENSMALG00000005039	srl	98	83.032	Monopterus_albus
ENSHGLG00100019378	SRL	89	76.372	ENSMALG00000000670	SRL	98	75.418	Monopterus_albus
ENSHGLG00100019378	SRL	100	97.669	MGP_CAROLIEiJ_G0020400	Srl	100	97.669	Mus_caroli
ENSHGLG00100019378	SRL	100	97.669	ENSMUSG00000022519	Srl	100	97.669	Mus_musculus
ENSHGLG00100019378	SRL	100	97.669	MGP_SPRETEiJ_G0021294	Srl	100	97.669	Mus_spretus
ENSHGLG00100019378	SRL	96	98.230	ENSMPUG00000015025	SRL	55	98.230	Mustela_putorius_furo
ENSHGLG00100019378	SRL	98	96.095	ENSMLUG00000030733	SRL	58	96.095	Myotis_lucifugus
ENSHGLG00100019378	SRL	100	97.669	ENSNGAG00000019741	Srl	100	97.669	Nannospalax_galili
ENSHGLG00100019378	SRL	98	82.151	ENSNBRG00000023775	srl	96	82.965	Neolamprologus_brichardi
ENSHGLG00100019378	SRL	94	72.747	ENSNBRG00000002422	SRL	62	68.421	Neolamprologus_brichardi
ENSHGLG00100019378	SRL	100	90.486	ENSNLEG00000029051	SRL	100	90.486	Nomascus_leucogenys
ENSHGLG00100019378	SRL	97	90.870	ENSOPRG00000000477	-	53	91.630	Ochotona_princeps
ENSHGLG00100019378	SRL	100	97.881	ENSODEG00000013256	SRL	100	97.881	Octodon_degus
ENSHGLG00100019378	SRL	97	82.135	ENSONIG00000005192	srl	96	82.743	Oreochromis_niloticus
ENSHGLG00100019378	SRL	97	96.739	ENSOCUG00000025140	SRL	51	96.739	Oryctolagus_cuniculus
ENSHGLG00100019378	SRL	100	80.508	ENSORLG00000008291	srl	92	85.567	Oryzias_latipes
ENSHGLG00100019378	SRL	96	74.279	ENSORLG00000015064	SRL	98	74.279	Oryzias_latipes
ENSHGLG00100019378	SRL	96	74.501	ENSORLG00020018173	SRL	98	74.501	Oryzias_latipes_hni
ENSHGLG00100019378	SRL	100	80.297	ENSORLG00020019784	srl	79	85.309	Oryzias_latipes_hni
ENSHGLG00100019378	SRL	96	74.723	ENSORLG00015019063	SRL	98	74.723	Oryzias_latipes_hsok
ENSHGLG00100019378	SRL	100	79.873	ENSORLG00015009342	srl	93	81.278	Oryzias_latipes_hsok
ENSHGLG00100019378	SRL	94	72.867	ENSOMEG00000005682	SRL	53	73.187	Oryzias_melastigma
ENSHGLG00100019378	SRL	100	80.085	ENSOMEG00000010006	srl	98	83.182	Oryzias_melastigma
ENSHGLG00100019378	SRL	96	96.916	ENSOGAG00000029266	SRL	55	96.916	Otolemur_garnettii
ENSHGLG00100019378	SRL	99	95.699	ENSOARG00000003074	SRL	57	97.118	Ovis_aries
ENSHGLG00100019378	SRL	100	97.040	ENSPPAG00000024919	-	100	98.608	Pan_paniscus
ENSHGLG00100019378	SRL	100	97.040	ENSPPRG00000010274	SRL	100	98.376	Panthera_pardus
ENSHGLG00100019378	SRL	100	97.040	ENSPTIG00000015162	SRL	100	98.376	Panthera_tigris_altaica
ENSHGLG00100019378	SRL	100	97.040	ENSPTRG00000007712	SRL	100	98.608	Pan_troglodytes
ENSHGLG00100019378	SRL	98	96.963	ENSPANG00000013804	SRL	99	96.963	Papio_anubis
ENSHGLG00100019378	SRL	100	81.395	ENSPKIG00000006405	srl	93	84.842	Paramormyrops_kingsleyae
ENSHGLG00100019378	SRL	100	74.576	ENSPKIG00000024974	SRL	88	77.149	Paramormyrops_kingsleyae
ENSHGLG00100019378	SRL	96	91.189	ENSPSIG00000008586	SRL	51	91.189	Pelodiscus_sinensis
ENSHGLG00100019378	SRL	94	73.529	ENSPMGG00000023505	-	99	72.809	Periophthalmus_magnuspinnatus
ENSHGLG00100019378	SRL	96	83.444	ENSPMGG00000021081	srl	97	83.444	Periophthalmus_magnuspinnatus
ENSHGLG00100019378	SRL	100	97.881	ENSPEMG00000015842	Srl	100	97.881	Peromyscus_maniculatus_bairdii
ENSHGLG00100019378	SRL	89	67.890	ENSPMAG00000004786	srl	99	67.661	Petromyzon_marinus
ENSHGLG00100019378	SRL	96	96.231	ENSPCIG00000012128	SRL	98	96.231	Phascolarctos_cinereus
ENSHGLG00100019378	SRL	100	78.926	ENSPFOG00000011408	srl	94	81.579	Poecilia_formosa
ENSHGLG00100019378	SRL	97	81.699	ENSPLAG00000008017	srl	97	83.371	Poecilia_latipinna
ENSHGLG00100019378	SRL	94	76.018	ENSPLAG00000002932	SRL	98	74.887	Poecilia_latipinna
ENSHGLG00100019378	SRL	100	80.720	ENSPMEG00000006745	srl	97	83.371	Poecilia_mexicana
ENSHGLG00100019378	SRL	94	73.742	ENSPMEG00000005890	SRL	59	72.967	Poecilia_mexicana
ENSHGLG00100019378	SRL	100	80.297	ENSPREG00000007751	srl	99	83.146	Poecilia_reticulata
ENSHGLG00100019378	SRL	94	77.149	ENSPREG00000000315	SRL	98	76.018	Poecilia_reticulata
ENSHGLG00100019378	SRL	89	98.807	ENSPPYG00000007053	SRL	98	98.807	Pongo_abelii
ENSHGLG00100019378	SRL	96	96.468	ENSPCAG00000003378	-	51	96.468	Procavia_capensis
ENSHGLG00100019378	SRL	100	96.406	ENSPCOG00000023135	SRL	100	98.376	Propithecus_coquereli
ENSHGLG00100019378	SRL	96	98.451	ENSPVAG00000006586	SRL	56	98.451	Pteropus_vampyrus
ENSHGLG00100019378	SRL	94	72.747	ENSPNYG00000003423	SRL	57	71.648	Pundamilia_nyererei
ENSHGLG00100019378	SRL	98	82.151	ENSPNYG00000001200	srl	98	83.111	Pundamilia_nyererei
ENSHGLG00100019378	SRL	97	73.810	ENSPNAG00000007361	-	93	74.009	Pygocentrus_nattereri
ENSHGLG00100019378	SRL	100	79.449	ENSPNAG00000023106	srl	94	82.805	Pygocentrus_nattereri
ENSHGLG00100019378	SRL	97	97.162	ENSRNOG00000005269	Srl	51	97.162	Rattus_norvegicus
ENSHGLG00100019378	SRL	97	96.739	ENSRBIG00000042358	SRL	51	96.739	Rhinopithecus_bieti
ENSHGLG00100019378	SRL	100	97.040	ENSSBOG00000029273	SRL	100	97.040	Saimiri_boliviensis_boliviensis
ENSHGLG00100019378	SRL	97	96.272	ENSSHAG00000011715	-	51	96.272	Sarcophilus_harrisii
ENSHGLG00100019378	SRL	100	79.339	ENSSFOG00015009773	srl	97	83.700	Scleropages_formosus
ENSHGLG00100019378	SRL	94	76.697	ENSSFOG00015021327	SRL	51	75.109	Scleropages_formosus
ENSHGLG00100019378	SRL	100	80.761	ENSSMAG00000016274	srl	99	82.237	Scophthalmus_maximus
ENSHGLG00100019378	SRL	93	73.523	ENSSMAG00000002232	SRL	50	72.308	Scophthalmus_maximus
ENSHGLG00100019378	SRL	94	75.278	ENSSDUG00000009161	SRL	98	75.278	Seriola_dumerili
ENSHGLG00100019378	SRL	94	84.389	ENSSDUG00000010808	srl	97	84.389	Seriola_dumerili
ENSHGLG00100019378	SRL	94	74.836	ENSSLDG00000014601	SRL	99	74.945	Seriola_lalandi_dorsalis
ENSHGLG00100019378	SRL	96	83.223	ENSSLDG00000022024	srl	95	84.389	Seriola_lalandi_dorsalis
ENSHGLG00100019378	SRL	96	90.929	ENSSPUG00000016859	SRL	99	90.929	Sphenodon_punctatus
ENSHGLG00100019378	SRL	93	76.190	ENSSPAG00000014254	SRL	98	75.057	Stegastes_partitus
ENSHGLG00100019378	SRL	100	81.568	ENSSPAG00000019105	srl	96	83.223	Stegastes_partitus
ENSHGLG00100019378	SRL	96	96.909	ENSSSCG00000007949	SRL	99	97.321	Sus_scrofa
ENSHGLG00100019378	SRL	96	90.549	ENSTGUG00000003951	-	99	90.549	Taeniopygia_guttata
ENSHGLG00100019378	SRL	77	92.818	ENSTGUG00000016121	-	96	93.678	Taeniopygia_guttata
ENSHGLG00100019378	SRL	89	76.134	ENSTRUG00000013310	SRL	55	76.134	Takifugu_rubripes
ENSHGLG00100019378	SRL	100	81.144	ENSTRUG00000006005	srl	97	82.159	Takifugu_rubripes
ENSHGLG00100019378	SRL	96	81.938	ENSTNIG00000009739	srl	97	81.938	Tetraodon_nigroviridis
ENSHGLG00100019378	SRL	96	98.451	ENSUAMG00000005701	SRL	56	98.451	Ursus_americanus
ENSHGLG00100019378	SRL	96	98.673	ENSUMAG00000002574	SRL	56	98.673	Ursus_maritimus
ENSHGLG00100019378	SRL	96	98.238	ENSVVUG00000016331	-	50	98.238	Vulpes_vulpes
ENSHGLG00100019378	SRL	96	89.602	ENSXETG00000017313	srl	100	89.602	Xenopus_tropicalis
ENSHGLG00100019378	SRL	96	75.166	ENSXCOG00000014584	SRL	100	75.166	Xiphophorus_couchianus
ENSHGLG00100019378	SRL	89	85.036	ENSXCOG00000010424	srl	97	85.036	Xiphophorus_couchianus
ENSHGLG00100019378	SRL	94	74.066	ENSXMAG00000027598	SRL	62	73.626	Xiphophorus_maculatus
ENSHGLG00100019378	SRL	100	80.508	ENSXMAG00000004625	srl	92	82.159	Xiphophorus_maculatus