EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100019438 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 21424 bases
Position: chrJH166867.1:2598351-2619774
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100026506	CSD	PF00313.22	1.2e-85	1	5
ENSHGLP00100026506	CSD	PF00313.22	1.2e-85	2	5
ENSHGLP00100026506	CSD	PF00313.22	1.2e-85	3	5
ENSHGLP00100026506	CSD	PF00313.22	1.2e-85	4	5
ENSHGLP00100026506	CSD	PF00313.22	1.2e-85	5	5
ENSHGLP00100026505	CSD	PF00313.22	1.6e-85	1	5
ENSHGLP00100026505	CSD	PF00313.22	1.6e-85	2	5
ENSHGLP00100026505	CSD	PF00313.22	1.6e-85	3	5
ENSHGLP00100026505	CSD	PF00313.22	1.6e-85	4	5
ENSHGLP00100026505	CSD	PF00313.22	1.6e-85	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100026773	-	2397	-	ENSHGLP00100026505	798 (aa)	-	UPI00034FE74D
ENSHGLT00100026774	-	2304	-	ENSHGLP00100026506	767 (aa)	-	-

Gene Model

Click here to download ENSHGLG00100019438's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100019438's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100019438	-	99	82.851	ENSHGLG00100004833	-	100	82.851
ENSHGLG00100019438	-	100	85.007	ENSHGLG00100012072	-	100	85.007
ENSHGLG00100019438	-	99	90.423	ENSHGLG00100006910	-	100	90.423
ENSHGLG00100019438	-	93	84.658	ENSHGLG00100004195	-	100	84.658
ENSHGLG00100019438	-	99	83.443	ENSHGLG00100007287	-	98	83.443
ENSHGLG00100019438	-	100	80.859	ENSHGLG00100001846	-	100	80.859
ENSHGLG00100019438	-	99	85.357	ENSHGLG00100002245	-	99	85.357

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100019438	-	100	99.248	ENSG00000009307	CSDE1	100	100.000	Homo_sapiens
ENSHGLG00100019438	-	100	77.532	ENSAPOG00000015538	csde1	100	77.532	Acanthochromis_polyacanthus
ENSHGLG00100019438	-	100	97.914	ENSAMEG00000017129	CSDE1	94	97.914	Ailuropoda_melanoleuca
ENSHGLG00100019438	-	91	76.757	ENSACIG00000015175	csde1	100	76.757	Amphilophus_citrinellus
ENSHGLG00100019438	-	100	77.662	ENSAOCG00000011510	csde1	100	77.662	Amphiprion_ocellaris
ENSHGLG00100019438	-	100	77.662	ENSAPEG00000007194	csde1	100	77.662	Amphiprion_percula
ENSHGLG00100019438	-	100	77.273	ENSATEG00000003864	csde1	100	77.273	Anabas_testudineus
ENSHGLG00100019438	-	100	91.656	ENSAPLG00000008797	CSDE1	100	91.656	Anas_platyrhynchos
ENSHGLG00100019438	-	100	92.105	ENSACAG00000003120	CSDE1	100	92.105	Anolis_carolinensis
ENSHGLG00100019438	-	93	73.404	ENSANAG00000028396	-	91	74.150	Aotus_nancymaae
ENSHGLG00100019438	-	100	98.957	ENSANAG00000024665	CSDE1	95	98.957	Aotus_nancymaae
ENSHGLG00100019438	-	100	77.113	ENSACLG00000013296	csde1	100	77.113	Astatotilapia_calliptera
ENSHGLG00100019438	-	100	76.783	ENSAMXG00000007436	csde1	100	76.783	Astyanax_mexicanus
ENSHGLG00100019438	-	100	98.371	ENSBTAG00000000678	CSDE1	100	98.305	Bos_taurus
ENSHGLG00100019438	-	100	98.997	ENSCJAG00000012565	CSDE1	95	98.997	Callithrix_jacchus
ENSHGLG00100019438	-	98	99.069	ENSCAFG00000009618	CSDE1	94	99.069	Canis_familiaris
ENSHGLG00100019438	-	100	99.087	ENSCAFG00020000481	CSDE1	100	99.087	Canis_lupus_dingo
ENSHGLG00100019438	-	100	98.371	ENSCHIG00000017250	CSDE1	100	98.305	Capra_hircus
ENSHGLG00100019438	-	100	98.622	ENSTSYG00000003747	CSDE1	100	98.622	Carlito_syrichta
ENSHGLG00100019438	-	100	92.982	ENSCAPG00000015128	CSDE1	100	92.982	Cavia_aperea
ENSHGLG00100019438	-	100	94.110	ENSCPOG00000040388	CSDE1	100	94.110	Cavia_porcellus
ENSHGLG00100019438	-	96	73.942	ENSCCAG00000030878	-	91	73.942	Cebus_capucinus
ENSHGLG00100019438	-	95	76.733	ENSCCAG00000033677	-	99	76.247	Cebus_capucinus
ENSHGLG00100019438	-	100	98.997	ENSCCAG00000036794	CSDE1	100	98.997	Cebus_capucinus
ENSHGLG00100019438	-	100	99.248	ENSCATG00000036962	CSDE1	98	99.525	Cercocebus_atys
ENSHGLG00100019438	-	100	99.248	ENSCLAG00000006618	CSDE1	100	99.248	Chinchilla_lanigera
ENSHGLG00100019438	-	100	99.248	ENSCSAG00000001658	CSDE1	95	99.248	Chlorocebus_sabaeus
ENSHGLG00100019438	-	100	99.387	ENSCHOG00000000918	CSDE1	85	99.387	Choloepus_hoffmanni
ENSHGLG00100019438	-	100	92.481	ENSCPBG00000016547	CSDE1	100	92.481	Chrysemys_picta_bellii
ENSHGLG00100019438	-	97	42.787	ENSCING00000014465	-	96	42.787	Ciona_intestinalis
ENSHGLG00100019438	-	96	42.503	ENSCSAVG00000008100	-	98	42.503	Ciona_savignyi
ENSHGLG00100019438	-	99	93.784	ENSCANG00000031069	-	100	93.784	Colobus_angolensis_palliatus
ENSHGLG00100019438	-	100	99.248	ENSCANG00000035096	CSDE1	98	99.525	Colobus_angolensis_palliatus
ENSHGLG00100019438	-	100	81.617	ENSCGRG00001014011	-	100	81.617	Cricetulus_griseus_chok1gshd
ENSHGLG00100019438	-	100	98.872	ENSCGRG00001016833	-	100	98.872	Cricetulus_griseus_chok1gshd
ENSHGLG00100019438	-	97	98.218	ENSCGRG00000002225	-	100	98.218	Cricetulus_griseus_crigri
ENSHGLG00100019438	-	100	86.087	ENSCGRG00000005831	-	100	86.087	Cricetulus_griseus_crigri
ENSHGLG00100019438	-	100	77.243	ENSCSEG00000002620	csde1	100	77.243	Cynoglossus_semilaevis
ENSHGLG00100019438	-	100	76.494	ENSCVAG00000001344	csde1	100	76.494	Cyprinodon_variegatus
ENSHGLG00100019438	-	100	77.528	ENSDARG00000074758	csde1	100	77.528	Danio_rerio
ENSHGLG00100019438	-	80	70.342	ENSDNOG00000034464	-	100	71.304	Dasypus_novemcinctus
ENSHGLG00100019438	-	100	98.568	ENSDNOG00000010287	-	93	98.568	Dasypus_novemcinctus
ENSHGLG00100019438	-	100	98.371	ENSDORG00000011609	Csde1	100	98.371	Dipodomys_ordii
ENSHGLG00100019438	-	97	47.746	FBgn0263352	Unr	73	48.394	Drosophila_melanogaster
ENSHGLG00100019438	-	90	87.184	ENSETEG00000006280	-	100	87.184	Echinops_telfairi
ENSHGLG00100019438	-	99	76.632	ENSETEG00000013678	-	99	76.632	Echinops_telfairi
ENSHGLG00100019438	-	79	68.377	ENSETEG00000007109	-	99	68.377	Echinops_telfairi
ENSHGLG00100019438	-	93	98.347	ENSETEG00000002491	-	74	98.347	Echinops_telfairi
ENSHGLG00100019438	-	99	55.651	ENSEBUG00000008647	csde1	99	53.929	Eptatretus_burgeri
ENSHGLG00100019438	-	100	98.872	ENSEASG00005006284	CSDE1	100	98.872	Equus_asinus_asinus
ENSHGLG00100019438	-	100	98.872	ENSECAG00000020885	CSDE1	100	98.872	Equus_caballus
ENSHGLG00100019438	-	92	99.476	ENSEEUG00000006286	CSDE1	68	99.476	Erinaceus_europaeus
ENSHGLG00100019438	-	100	75.809	ENSELUG00000015507	csde1	100	75.809	Esox_lucius
ENSHGLG00100019438	-	100	99.123	ENSFCAG00000029266	CSDE1	100	99.087	Felis_catus
ENSHGLG00100019438	-	100	91.980	ENSFALG00000003407	CSDE1	100	91.980	Ficedula_albicollis
ENSHGLG00100019438	-	100	99.749	ENSFDAG00000007882	CSDE1	100	99.749	Fukomys_damarensis
ENSHGLG00100019438	-	100	76.529	ENSFHEG00000010799	csde1	100	76.529	Fundulus_heteroclitus
ENSHGLG00100019438	-	99	76.721	ENSGMOG00000012731	csde1	100	76.721	Gadus_morhua
ENSHGLG00100019438	-	98	91.944	ENSGALG00000002139	CSDE1	98	91.944	Gallus_gallus
ENSHGLG00100019438	-	92	76.220	ENSGAFG00000005241	csde1	95	76.220	Gambusia_affinis
ENSHGLG00100019438	-	99	77.625	ENSGACG00000004544	csde1	100	77.625	Gasterosteus_aculeatus
ENSHGLG00100019438	-	100	92.105	ENSGAGG00000017685	CSDE1	100	92.105	Gopherus_agassizii
ENSHGLG00100019438	-	100	99.248	ENSGGOG00000002164	CSDE1	100	99.218	Gorilla_gorilla
ENSHGLG00100019438	-	100	77.113	ENSHBUG00000020315	csde1	100	77.113	Haplochromis_burtoni
ENSHGLG00100019438	-	99	86.071	ENSHGLG00000007471	-	98	86.071	Heterocephalus_glaber_female
ENSHGLG00100019438	-	99	89.970	ENSHGLG00000008555	-	100	89.970	Heterocephalus_glaber_female
ENSHGLG00100019438	-	99	81.054	ENSHGLG00000000650	-	99	81.054	Heterocephalus_glaber_female
ENSHGLG00100019438	-	99	90.646	ENSHGLG00000010039	-	100	90.646	Heterocephalus_glaber_female
ENSHGLG00100019438	-	100	82.957	ENSHGLG00000019549	-	100	82.957	Heterocephalus_glaber_female
ENSHGLG00100019438	-	100	90.602	ENSHGLG00000009620	-	100	90.602	Heterocephalus_glaber_female
ENSHGLG00100019438	-	100	90.091	ENSHGLG00000003829	-	100	90.091	Heterocephalus_glaber_female
ENSHGLG00100019438	-	100	76.203	ENSHCOG00000004158	csde1	100	76.203	Hippocampus_comes
ENSHGLG00100019438	-	100	76.524	ENSIPUG00000000355	csde1	100	76.524	Ictalurus_punctatus
ENSHGLG00100019438	-	92	81.935	ENSSTOG00000032722	-	98	83.065	Ictidomys_tridecemlineatus
ENSHGLG00100019438	-	100	80.691	ENSSTOG00000030994	-	100	80.691	Ictidomys_tridecemlineatus
ENSHGLG00100019438	-	100	98.622	ENSJJAG00000019571	Csde1	100	98.622	Jaculus_jaculus
ENSHGLG00100019438	-	100	76.398	ENSKMAG00000005685	csde1	100	76.020	Kryptolebias_marmoratus
ENSHGLG00100019438	-	100	77.403	ENSLBEG00000014770	csde1	100	77.403	Labrus_bergylta
ENSHGLG00100019438	-	100	79.777	ENSLACG00000018452	CSDE1	94	79.777	Latimeria_chalumnae
ENSHGLG00100019438	-	100	79.850	ENSLOCG00000010413	csde1	94	79.850	Lepisosteus_oculatus
ENSHGLG00100019438	-	100	97.523	ENSLAFG00000007150	CSDE1	96	97.523	Loxodonta_africana
ENSHGLG00100019438	-	100	99.248	ENSMFAG00000003674	CSDE1	100	99.218	Macaca_fascicularis
ENSHGLG00100019438	-	100	99.248	ENSMMUG00000001974	CSDE1	100	99.218	Macaca_mulatta
ENSHGLG00100019438	-	100	99.248	ENSMNEG00000045247	CSDE1	98	99.525	Macaca_nemestrina
ENSHGLG00100019438	-	100	98.997	ENSMLEG00000038673	CSDE1	95	98.997	Mandrillus_leucophaeus
ENSHGLG00100019438	-	100	78.052	ENSMAMG00000008821	csde1	100	78.052	Mastacembelus_armatus
ENSHGLG00100019438	-	100	77.113	ENSMZEG00005021675	csde1	100	77.113	Maylandia_zebra
ENSHGLG00100019438	-	100	91.406	ENSMGAG00000016381	CSDE1	100	91.406	Meleagris_gallopavo
ENSHGLG00100019438	-	100	98.872	ENSMAUG00000014031	Csde1	100	98.872	Mesocricetus_auratus
ENSHGLG00100019438	-	100	98.435	ENSMICG00000002050	CSDE1	99	98.884	Microcebus_murinus
ENSHGLG00100019438	-	100	98.872	ENSMOCG00000018960	Csde1	100	98.872	Microtus_ochrogaster
ENSHGLG00100019438	-	100	77.403	ENSMMOG00000015075	csde1	100	77.403	Mola_mola
ENSHGLG00100019438	-	100	95.865	ENSMODG00000004685	CSDE1	100	95.865	Monodelphis_domestica
ENSHGLG00100019438	-	100	77.662	ENSMALG00000007132	csde1	100	77.662	Monopterus_albus
ENSHGLG00100019438	-	100	98.622	MGP_CAROLIEiJ_G0025444	Csde1	100	98.675	Mus_caroli
ENSHGLG00100019438	-	100	98.747	ENSMUSG00000068823	Csde1	100	98.747	Mus_musculus
ENSHGLG00100019438	-	100	98.997	MGP_PahariEiJ_G0026888	Csde1	100	98.997	Mus_pahari
ENSHGLG00100019438	-	100	98.997	MGP_SPRETEiJ_G0026394	Csde1	100	98.997	Mus_spretus
ENSHGLG00100019438	-	98	99.106	ENSMPUG00000005753	CSDE1	99	99.106	Mustela_putorius_furo
ENSHGLG00100019438	-	100	98.044	ENSMLUG00000005681	CSDE1	94	98.044	Myotis_lucifugus
ENSHGLG00100019438	-	100	99.123	ENSNGAG00000021929	Csde1	100	99.123	Nannospalax_galili
ENSHGLG00100019438	-	97	71.269	ENSNGAG00000012599	-	100	71.269	Nannospalax_galili
ENSHGLG00100019438	-	100	77.113	ENSNBRG00000020808	csde1	100	77.113	Neolamprologus_brichardi
ENSHGLG00100019438	-	100	99.123	ENSNLEG00000004842	CSDE1	97	99.087	Nomascus_leucogenys
ENSHGLG00100019438	-	98	96.117	ENSMEUG00000002677	CSDE1	96	96.117	Notamacropus_eugenii
ENSHGLG00100019438	-	98	97.087	ENSOPRG00000005002	CSDE1	82	94.246	Ochotona_princeps
ENSHGLG00100019438	-	100	99.123	ENSODEG00000007383	-	100	99.123	Octodon_degus
ENSHGLG00100019438	-	97	67.920	ENSODEG00000005979	-	98	67.920	Octodon_degus
ENSHGLG00100019438	-	100	74.969	ENSONIG00000009309	csde1	100	74.969	Oreochromis_niloticus
ENSHGLG00100019438	-	100	79.426	ENSOANG00000003346	-	100	79.426	Ornithorhynchus_anatinus
ENSHGLG00100019438	-	100	98.246	ENSOCUG00000016438	CSDE1	95	98.246	Oryctolagus_cuniculus
ENSHGLG00100019438	-	100	77.243	ENSORLG00000000707	csde1	100	77.243	Oryzias_latipes
ENSHGLG00100019438	-	100	76.750	ENSORLG00020005148	csde1	100	74.969	Oryzias_latipes_hni
ENSHGLG00100019438	-	100	77.243	ENSORLG00015019415	csde1	100	77.243	Oryzias_latipes_hsok
ENSHGLG00100019438	-	100	78.052	ENSOMEG00000015656	csde1	100	78.052	Oryzias_melastigma
ENSHGLG00100019438	-	100	99.218	ENSOGAG00000012127	CSDE1	94	99.218	Otolemur_garnettii
ENSHGLG00100019438	-	100	98.435	ENSOARG00000020034	CSDE1	94	98.435	Ovis_aries
ENSHGLG00100019438	-	100	99.248	ENSPPAG00000025861	CSDE1	100	99.218	Pan_paniscus
ENSHGLG00100019438	-	100	99.123	ENSPPRG00000006747	CSDE1	95	99.123	Panthera_pardus
ENSHGLG00100019438	-	100	99.123	ENSPTIG00000015468	CSDE1	100	99.123	Panthera_tigris_altaica
ENSHGLG00100019438	-	100	99.248	ENSPTRG00000033721	CSDE1	100	99.248	Pan_troglodytes
ENSHGLG00100019438	-	100	99.248	ENSPANG00000018873	CSDE1	100	99.218	Papio_anubis
ENSHGLG00100019438	-	100	77.113	ENSPKIG00000009459	csde1	100	77.113	Paramormyrops_kingsleyae
ENSHGLG00100019438	-	96	95.354	ENSPSIG00000003823	CSDE1	96	95.354	Pelodiscus_sinensis
ENSHGLG00100019438	-	100	77.013	ENSPMGG00000000772	csde1	100	77.013	Periophthalmus_magnuspinnatus
ENSHGLG00100019438	-	100	98.872	ENSPEMG00000020357	-	100	98.872	Peromyscus_maniculatus_bairdii
ENSHGLG00100019438	-	100	95.990	ENSPCIG00000022587	CSDE1	100	95.990	Phascolarctos_cinereus
ENSHGLG00100019438	-	99	75.155	ENSPFOG00000012664	csde1	100	75.621	Poecilia_formosa
ENSHGLG00100019438	-	97	71.121	ENSPLAG00000017680	csde1	93	71.121	Poecilia_latipinna
ENSHGLG00100019438	-	98	71.017	ENSPMEG00000005094	csde1	96	71.017	Poecilia_mexicana
ENSHGLG00100019438	-	100	75.901	ENSPREG00000011631	csde1	100	73.709	Poecilia_reticulata
ENSHGLG00100019438	-	100	99.123	ENSPPYG00000000996	CSDE1	100	99.123	Pongo_abelii
ENSHGLG00100019438	-	100	98.415	ENSPCAG00000014368	CSDE1	90	98.415	Procavia_capensis
ENSHGLG00100019438	-	100	98.957	ENSPCOG00000017893	CSDE1	100	98.957	Propithecus_coquereli
ENSHGLG00100019438	-	90	84.328	ENSPCOG00000008223	-	92	82.847	Propithecus_coquereli
ENSHGLG00100019438	-	100	92.960	ENSPVAG00000008225	CSDE1	95	92.960	Pteropus_vampyrus
ENSHGLG00100019438	-	100	77.113	ENSPNYG00000013745	csde1	100	77.113	Pundamilia_nyererei
ENSHGLG00100019438	-	100	77.273	ENSPNAG00000001958	csde1	100	77.273	Pygocentrus_nattereri
ENSHGLG00100019438	-	100	98.872	ENSRNOG00000061058	Csde1	100	98.872	Rattus_norvegicus
ENSHGLG00100019438	-	100	95.443	ENSRBIG00000038088	-	99	97.696	Rhinopithecus_bieti
ENSHGLG00100019438	-	100	93.498	ENSRBIG00000038966	-	94	93.498	Rhinopithecus_bieti
ENSHGLG00100019438	-	100	99.248	ENSRROG00000043101	CSDE1	98	99.289	Rhinopithecus_roxellana
ENSHGLG00100019438	-	100	98.997	ENSSBOG00000035592	CSDE1	95	98.997	Saimiri_boliviensis_boliviensis
ENSHGLG00100019438	-	100	95.698	ENSSHAG00000009831	CSDE1	100	95.698	Sarcophilus_harrisii
ENSHGLG00100019438	-	100	77.113	ENSSFOG00015007498	csde1	100	77.113	Scleropages_formosus
ENSHGLG00100019438	-	100	78.052	ENSSMAG00000007203	csde1	100	78.052	Scophthalmus_maximus
ENSHGLG00100019438	-	100	77.403	ENSSDUG00000015380	csde1	100	77.403	Seriola_dumerili
ENSHGLG00100019438	-	100	77.403	ENSSLDG00000008819	csde1	100	77.403	Seriola_lalandi_dorsalis
ENSHGLG00100019438	-	100	97.914	ENSSARG00000000738	CSDE1	94	97.914	Sorex_araneus
ENSHGLG00100019438	-	100	91.729	ENSSPUG00000008714	CSDE1	100	91.729	Sphenodon_punctatus
ENSHGLG00100019438	-	100	77.532	ENSSPAG00000000716	csde1	100	77.532	Stegastes_partitus
ENSHGLG00100019438	-	100	98.872	ENSSSCG00000006752	CSDE1	100	98.827	Sus_scrofa
ENSHGLG00100019438	-	100	91.000	ENSTGUG00000000972	CSDE1	100	91.000	Taeniopygia_guttata
ENSHGLG00100019438	-	100	74.382	ENSTRUG00000007996	csde1	100	74.382	Takifugu_rubripes
ENSHGLG00100019438	-	93	80.989	ENSTNIG00000010878	csde1	100	80.989	Tetraodon_nigroviridis
ENSHGLG00100019438	-	93	98.718	ENSTBEG00000011880	-	62	99.387	Tupaia_belangeri
ENSHGLG00100019438	-	100	98.044	ENSTTRG00000015583	CSDE1	94	98.044	Tursiops_truncatus
ENSHGLG00100019438	-	89	99.674	ENSUAMG00000021779	-	100	99.035	Ursus_americanus
ENSHGLG00100019438	-	89	94.364	ENSUAMG00000024289	-	99	94.364	Ursus_americanus
ENSHGLG00100019438	-	97	99.050	ENSUMAG00000011714	-	99	99.050	Ursus_maritimus
ENSHGLG00100019438	-	100	91.265	ENSUMAG00000009720	-	97	91.265	Ursus_maritimus
ENSHGLG00100019438	-	100	98.122	ENSVPAG00000000749	CSDE1	79	98.122	Vicugna_pacos
ENSHGLG00100019438	-	90	99.123	ENSVVUG00000009890	CSDE1	94	99.123	Vulpes_vulpes
ENSHGLG00100019438	-	100	85.643	ENSXETG00000021448	csde1	100	85.643	Xenopus_tropicalis
ENSHGLG00100019438	-	92	85.455	ENSXCOG00000000035	csde1	85	85.455	Xiphophorus_couchianus
ENSHGLG00100019438	-	100	77.125	ENSXMAG00000009080	csde1	98	77.454	Xiphophorus_maculatus