EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100019596 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: small nuclear ribonucleoprotein F-like
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 261 bases
Position: chrJH165527.1:386337-386597
Accession: 101725717
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100026662	LSM	PF01423.22	6.5e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100026953	-	261	-	ENSHGLP00100026662	86 (aa)	XP_012922390	UPI00065746C1

Gene Model

Click here to download ENSHGLG00100019596's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100019596's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100019596	-	78	49.254	ENSHGLG00100014341	LSM6	83	50.000
ENSHGLG00100019596	-	99	98.824	ENSHGLG00100008103	-	100	98.824

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100019596	-	100	98.837	ENSG00000139343	SNRPF	100	98.837	Homo_sapiens
ENSHGLG00100019596	-	99	96.471	ENSAPOG00000003377	snrpf	66	96.471	Acanthochromis_polyacanthus
ENSHGLG00100019596	-	99	98.824	ENSAMEG00000002166	-	100	98.824	Ailuropoda_melanoleuca
ENSHGLG00100019596	-	88	86.842	ENSAMEG00000018718	-	87	88.000	Ailuropoda_melanoleuca
ENSHGLG00100019596	-	98	96.429	ENSACIG00000013216	snrpf	99	96.429	Amphilophus_citrinellus
ENSHGLG00100019596	-	98	96.429	ENSAOCG00000015108	snrpf	99	96.429	Amphiprion_ocellaris
ENSHGLG00100019596	-	98	96.429	ENSAPEG00000022022	snrpf	99	96.429	Amphiprion_percula
ENSHGLG00100019596	-	98	96.429	ENSATEG00000022625	snrpf	90	96.429	Anabas_testudineus
ENSHGLG00100019596	-	99	97.647	ENSACAG00000014073	SNRPF	98	97.647	Anolis_carolinensis
ENSHGLG00100019596	-	83	90.141	ENSANAG00000020297	-	65	90.141	Aotus_nancymaae
ENSHGLG00100019596	-	100	98.837	ENSANAG00000032845	SNRPF	100	98.837	Aotus_nancymaae
ENSHGLG00100019596	-	87	69.333	ENSANAG00000025860	-	85	69.333	Aotus_nancymaae
ENSHGLG00100019596	-	98	96.429	ENSACLG00000016066	snrpf	99	96.429	Astatotilapia_calliptera
ENSHGLG00100019596	-	87	93.333	ENSAMXG00000007421	snrpf	87	93.333	Astyanax_mexicanus
ENSHGLG00100019596	-	91	92.308	ENSBTAG00000050012	-	93	92.000	Bos_taurus
ENSHGLG00100019596	-	100	98.837	ENSBTAG00000016271	SNRPF	100	98.837	Bos_taurus
ENSHGLG00100019596	-	90	72.727	WBGene00004918	snr-5	85	75.000	Caenorhabditis_elegans
ENSHGLG00100019596	-	100	98.837	ENSCJAG00000002705	-	100	98.837	Callithrix_jacchus
ENSHGLG00100019596	-	100	98.837	ENSCAFG00000006395	-	77	98.837	Canis_familiaris
ENSHGLG00100019596	-	85	90.411	ENSCAFG00000031151	-	85	93.151	Canis_familiaris
ENSHGLG00100019596	-	91	87.179	ENSCAFG00020013161	-	74	95.714	Canis_lupus_dingo
ENSHGLG00100019596	-	85	90.411	ENSCAFG00020010823	-	85	93.151	Canis_lupus_dingo
ENSHGLG00100019596	-	87	92.105	ENSTSYG00000036502	-	87	92.105	Carlito_syrichta
ENSHGLG00100019596	-	94	92.593	ENSTSYG00000031636	-	61	94.521	Carlito_syrichta
ENSHGLG00100019596	-	87	85.333	ENSTSYG00000030635	-	87	85.333	Carlito_syrichta
ENSHGLG00100019596	-	99	98.824	ENSCAPG00000007242	SNRPF	100	98.824	Cavia_aperea
ENSHGLG00100019596	-	100	98.837	ENSCPOG00000013898	SNRPF	100	98.837	Cavia_porcellus
ENSHGLG00100019596	-	100	87.209	ENSCCAG00000033627	-	59	88.000	Cebus_capucinus
ENSHGLG00100019596	-	100	97.674	ENSCCAG00000017356	-	100	97.674	Cebus_capucinus
ENSHGLG00100019596	-	100	98.837	ENSCCAG00000037378	-	100	98.837	Cebus_capucinus
ENSHGLG00100019596	-	100	98.837	ENSCLAG00000007200	SNRPF	100	98.837	Chinchilla_lanigera
ENSHGLG00100019596	-	100	98.837	ENSCSAG00000003602	-	70	98.837	Chlorocebus_sabaeus
ENSHGLG00100019596	-	74	98.438	ENSCHOG00000009392	SNRPF	100	98.438	Choloepus_hoffmanni
ENSHGLG00100019596	-	99	92.941	ENSCPBG00000024287	-	60	94.595	Chrysemys_picta_bellii
ENSHGLG00100019596	-	100	88.372	ENSCPBG00000026463	-	87	89.333	Chrysemys_picta_bellii
ENSHGLG00100019596	-	100	87.209	ENSCPBG00000001985	-	89	89.333	Chrysemys_picta_bellii
ENSHGLG00100019596	-	87	90.667	ENSCPBG00000006227	-	87	90.667	Chrysemys_picta_bellii
ENSHGLG00100019596	-	99	85.882	ENSCSAVG00000007498	-	84	87.838	Ciona_savignyi
ENSHGLG00100019596	-	100	98.837	ENSCGRG00001017100	-	100	98.837	Cricetulus_griseus_chok1gshd
ENSHGLG00100019596	-	87	90.667	ENSCGRG00001008965	-	58	90.667	Cricetulus_griseus_chok1gshd
ENSHGLG00100019596	-	100	98.837	ENSCGRG00000000336	-	100	98.837	Cricetulus_griseus_crigri
ENSHGLG00100019596	-	93	91.250	ENSCGRG00000018878	-	94	90.667	Cricetulus_griseus_crigri
ENSHGLG00100019596	-	87	94.667	ENSCSEG00000004748	snrpf	87	94.667	Cynoglossus_semilaevis
ENSHGLG00100019596	-	99	96.471	ENSCVAG00000000397	snrpf	67	96.471	Cyprinodon_variegatus
ENSHGLG00100019596	-	100	94.318	ENSDARG00000105037	snrpf	100	94.318	Danio_rerio
ENSHGLG00100019596	-	87	84.000	ENSDNOG00000049373	-	65	84.000	Dasypus_novemcinctus
ENSHGLG00100019596	-	100	98.837	ENSDNOG00000043775	-	55	98.837	Dasypus_novemcinctus
ENSHGLG00100019596	-	100	97.674	ENSDNOG00000048989	-	77	97.674	Dasypus_novemcinctus
ENSHGLG00100019596	-	81	97.143	ENSDORG00000029740	-	85	97.143	Dipodomys_ordii
ENSHGLG00100019596	-	84	87.500	ENSDORG00000025351	-	100	87.500	Dipodomys_ordii
ENSHGLG00100019596	-	98	77.381	FBgn0000426	SmF	83	80.822	Drosophila_melanogaster
ENSHGLG00100019596	-	100	98.837	ENSETEG00000001558	-	100	98.837	Echinops_telfairi
ENSHGLG00100019596	-	95	74.390	ENSEBUG00000001793	-	72	85.075	Eptatretus_burgeri
ENSHGLG00100019596	-	100	98.837	ENSECAG00000019817	SNRPF	70	98.837	Equus_caballus
ENSHGLG00100019596	-	99	98.824	ENSEEUG00000013509	SNRPF	100	98.824	Erinaceus_europaeus
ENSHGLG00100019596	-	87	93.333	ENSELUG00000003121	RUXF	87	93.333	Esox_lucius
ENSHGLG00100019596	-	100	90.698	ENSELUG00000007737	RUXF	86	92.000	Esox_lucius
ENSHGLG00100019596	-	98	78.571	ENSFCAG00000031148	-	72	76.923	Felis_catus
ENSHGLG00100019596	-	87	74.667	ENSFCAG00000021942	-	87	74.667	Felis_catus
ENSHGLG00100019596	-	100	98.837	ENSFCAG00000029966	-	100	98.837	Felis_catus
ENSHGLG00100019596	-	99	98.824	ENSFALG00000010799	SNRPF	99	98.824	Ficedula_albicollis
ENSHGLG00100019596	-	100	98.837	ENSFDAG00000002831	-	100	98.837	Fukomys_damarensis
ENSHGLG00100019596	-	99	96.471	ENSFHEG00000003240	snrpf	75	96.471	Fundulus_heteroclitus
ENSHGLG00100019596	-	99	96.471	ENSGMOG00000007741	snrpf	100	96.471	Gadus_morhua
ENSHGLG00100019596	-	100	98.837	ENSGALG00000011409	SNRPF	100	98.837	Gallus_gallus
ENSHGLG00100019596	-	98	96.429	ENSGAFG00000016187	snrpf	97	96.429	Gambusia_affinis
ENSHGLG00100019596	-	86	94.595	ENSGACG00000020055	snrpf	87	94.595	Gasterosteus_aculeatus
ENSHGLG00100019596	-	86	91.892	ENSGAGG00000012945	-	69	93.333	Gopherus_agassizii
ENSHGLG00100019596	-	92	89.873	ENSGAGG00000022991	-	80	92.647	Gopherus_agassizii
ENSHGLG00100019596	-	70	90.000	ENSGAGG00000011163	-	86	93.878	Gopherus_agassizii
ENSHGLG00100019596	-	80	85.507	ENSGAGG00000014132	-	83	85.507	Gopherus_agassizii
ENSHGLG00100019596	-	72	95.161	ENSGAGG00000020974	-	52	95.161	Gopherus_agassizii
ENSHGLG00100019596	-	92	74.684	ENSGGOG00000039564	-	90	73.333	Gorilla_gorilla
ENSHGLG00100019596	-	100	98.837	ENSGGOG00000001127	-	100	98.837	Gorilla_gorilla
ENSHGLG00100019596	-	98	79.762	ENSGGOG00000039936	-	83	77.333	Gorilla_gorilla
ENSHGLG00100019596	-	100	98.837	ENSHGLG00000009108	SNRPF	100	98.837	Heterocephalus_glaber_female
ENSHGLG00100019596	-	100	100.000	ENSHGLG00000021172	-	100	100.000	Heterocephalus_glaber_female
ENSHGLG00100019596	-	73	84.286	ENSHCOG00000018663	snrpf	55	84.286	Hippocampus_comes
ENSHGLG00100019596	-	100	96.512	ENSIPUG00000018994	snrpf	100	96.512	Ictalurus_punctatus
ENSHGLG00100019596	-	100	98.837	ENSSTOG00000010434	-	100	98.837	Ictidomys_tridecemlineatus
ENSHGLG00100019596	-	100	80.233	ENSJJAG00000004558	-	89	81.333	Jaculus_jaculus
ENSHGLG00100019596	-	78	92.537	ENSJJAG00000004828	-	86	94.643	Jaculus_jaculus
ENSHGLG00100019596	-	100	83.721	ENSJJAG00000010502	-	89	85.333	Jaculus_jaculus
ENSHGLG00100019596	-	100	98.837	ENSJJAG00000011272	-	100	98.837	Jaculus_jaculus
ENSHGLG00100019596	-	87	94.667	ENSKMAG00000013566	snrpf	87	94.667	Kryptolebias_marmoratus
ENSHGLG00100019596	-	87	94.667	ENSLBEG00000008800	snrpf	87	94.667	Labrus_bergylta
ENSHGLG00100019596	-	100	97.674	ENSLACG00000002456	-	74	97.674	Latimeria_chalumnae
ENSHGLG00100019596	-	87	93.333	ENSLOCG00000015744	snrpf	87	93.333	Lepisosteus_oculatus
ENSHGLG00100019596	-	99	98.824	ENSLAFG00000017426	SNRPF	99	98.824	Loxodonta_africana
ENSHGLG00100019596	-	85	94.521	ENSMAMG00000016593	snrpf	86	94.521	Mastacembelus_armatus
ENSHGLG00100019596	-	98	96.429	ENSMZEG00005014701	snrpf	99	96.429	Maylandia_zebra
ENSHGLG00100019596	-	98	98.810	ENSMGAG00000011453	-	76	98.810	Meleagris_gallopavo
ENSHGLG00100019596	-	86	98.649	ENSMAUG00000019737	-	100	98.649	Mesocricetus_auratus
ENSHGLG00100019596	-	87	93.333	ENSMAUG00000008799	-	87	93.333	Mesocricetus_auratus
ENSHGLG00100019596	-	97	73.494	ENSMAUG00000010289	-	96	73.494	Mesocricetus_auratus
ENSHGLG00100019596	-	86	98.649	ENSMAUG00000016909	-	100	98.649	Mesocricetus_auratus
ENSHGLG00100019596	-	100	98.837	ENSMICG00000012153	-	100	98.837	Microcebus_murinus
ENSHGLG00100019596	-	87	92.000	ENSMICG00000030494	-	60	92.000	Microcebus_murinus
ENSHGLG00100019596	-	79	83.824	ENSMOCG00000020220	-	87	83.824	Microtus_ochrogaster
ENSHGLG00100019596	-	100	98.837	ENSMOCG00000020437	Snrpf	100	98.837	Microtus_ochrogaster
ENSHGLG00100019596	-	87	84.000	ENSMOCG00000022166	-	82	84.000	Microtus_ochrogaster
ENSHGLG00100019596	-	99	95.294	ENSMMOG00000007127	snrpf	100	95.294	Mola_mola
ENSHGLG00100019596	-	100	98.837	ENSMODG00000008091	SNRPF	75	98.837	Monodelphis_domestica
ENSHGLG00100019596	-	98	96.429	ENSMALG00000012328	snrpf	99	96.429	Monopterus_albus
ENSHGLG00100019596	-	100	98.837	MGP_CAROLIEiJ_G0015735	-	100	98.837	Mus_caroli
ENSHGLG00100019596	-	100	98.837	ENSMUSG00000020018	Snrpf	100	98.837	Mus_musculus
ENSHGLG00100019596	-	100	98.837	MGP_PahariEiJ_G0031350	Snrpf	100	98.837	Mus_pahari
ENSHGLG00100019596	-	100	98.837	MGP_SPRETEiJ_G0016553	Snrpf	100	98.837	Mus_spretus
ENSHGLG00100019596	-	100	98.837	ENSMPUG00000007176	-	77	98.837	Mustela_putorius_furo
ENSHGLG00100019596	-	99	98.824	ENSMLUG00000013577	-	100	98.824	Myotis_lucifugus
ENSHGLG00100019596	-	100	98.837	ENSMLUG00000026149	-	81	98.837	Myotis_lucifugus
ENSHGLG00100019596	-	100	98.837	ENSMLUG00000029201	-	81	98.837	Myotis_lucifugus
ENSHGLG00100019596	-	100	81.395	ENSMLUG00000026269	-	71	80.000	Myotis_lucifugus
ENSHGLG00100019596	-	100	98.837	ENSMLUG00000027932	-	81	98.837	Myotis_lucifugus
ENSHGLG00100019596	-	73	88.889	ENSNGAG00000005851	-	71	88.333	Nannospalax_galili
ENSHGLG00100019596	-	100	98.837	ENSNGAG00000024292	-	100	98.837	Nannospalax_galili
ENSHGLG00100019596	-	99	96.471	ENSNBRG00000011682	snrpf	87	96.471	Neolamprologus_brichardi
ENSHGLG00100019596	-	86	70.270	ENSMEUG00000000671	SNRPF	87	70.270	Notamacropus_eugenii
ENSHGLG00100019596	-	100	98.837	ENSODEG00000010328	-	100	98.837	Octodon_degus
ENSHGLG00100019596	-	100	97.674	ENSOCUG00000010925	SNRPF	76	97.674	Oryctolagus_cuniculus
ENSHGLG00100019596	-	86	93.243	ENSORLG00020008216	snrpf	87	93.243	Oryzias_latipes_hni
ENSHGLG00100019596	-	86	93.243	ENSORLG00015007418	snrpf	87	93.243	Oryzias_latipes_hsok
ENSHGLG00100019596	-	85	94.521	ENSOMEG00000003018	snrpf	86	94.521	Oryzias_melastigma
ENSHGLG00100019596	-	100	96.512	ENSOGAG00000030323	-	100	96.512	Otolemur_garnettii
ENSHGLG00100019596	-	100	98.837	ENSOARG00000011853	-	75	98.837	Ovis_aries
ENSHGLG00100019596	-	98	79.762	ENSPPAG00000037544	-	83	77.333	Pan_paniscus
ENSHGLG00100019596	-	92	74.684	ENSPPAG00000037479	-	91	73.333	Pan_paniscus
ENSHGLG00100019596	-	100	98.837	ENSPPRG00000005875	-	100	98.837	Panthera_pardus
ENSHGLG00100019596	-	98	77.381	ENSPPRG00000007449	-	77	77.333	Panthera_pardus
ENSHGLG00100019596	-	100	98.837	ENSPTIG00000007520	SNRPF	100	98.837	Panthera_tigris_altaica
ENSHGLG00100019596	-	98	79.762	ENSPTIG00000005117	-	89	77.333	Panthera_tigris_altaica
ENSHGLG00100019596	-	98	79.762	ENSPTRG00000043814	-	83	77.333	Pan_troglodytes
ENSHGLG00100019596	-	92	75.949	ENSPTRG00000047717	-	91	74.667	Pan_troglodytes
ENSHGLG00100019596	-	99	96.471	ENSPKIG00000014784	snrpf	93	96.471	Paramormyrops_kingsleyae
ENSHGLG00100019596	-	99	98.824	ENSPSIG00000016462	SNRPF	99	98.824	Pelodiscus_sinensis
ENSHGLG00100019596	-	99	95.294	ENSPMGG00000023548	snrpf	100	95.294	Periophthalmus_magnuspinnatus
ENSHGLG00100019596	-	100	98.837	ENSPEMG00000023326	Snrpf	100	98.837	Peromyscus_maniculatus_bairdii
ENSHGLG00100019596	-	98	96.429	ENSPLAG00000023932	snrpf	99	96.429	Poecilia_latipinna
ENSHGLG00100019596	-	98	96.429	ENSPMEG00000003377	snrpf	99	96.429	Poecilia_mexicana
ENSHGLG00100019596	-	98	96.429	ENSPREG00000022635	snrpf	97	96.429	Poecilia_reticulata
ENSHGLG00100019596	-	100	98.837	ENSPPYG00000004847	-	100	98.837	Pongo_abelii
ENSHGLG00100019596	-	100	98.837	ENSPCOG00000023833	-	100	98.837	Propithecus_coquereli
ENSHGLG00100019596	-	100	98.837	ENSPVAG00000009036	SNRPF	100	98.837	Pteropus_vampyrus
ENSHGLG00100019596	-	98	96.429	ENSPNYG00000021712	snrpf	99	96.429	Pundamilia_nyererei
ENSHGLG00100019596	-	85	94.521	ENSPNAG00000019117	snrpf	86	94.521	Pygocentrus_nattereri
ENSHGLG00100019596	-	100	98.837	ENSRNOG00000005556	Snrpf	100	98.837	Rattus_norvegicus
ENSHGLG00100019596	-	87	96.000	ENSRBIG00000030414	-	87	96.000	Rhinopithecus_bieti
ENSHGLG00100019596	-	87	96.000	ENSRROG00000021975	-	87	96.000	Rhinopithecus_roxellana
ENSHGLG00100019596	-	81	59.155	YPR182W	SMX3	83	59.155	Saccharomyces_cerevisiae
ENSHGLG00100019596	-	100	97.674	ENSSBOG00000012868	-	100	97.674	Saimiri_boliviensis_boliviensis
ENSHGLG00100019596	-	87	84.000	ENSSBOG00000032297	-	86	84.000	Saimiri_boliviensis_boliviensis
ENSHGLG00100019596	-	91	79.012	ENSSBOG00000027638	-	91	79.012	Saimiri_boliviensis_boliviensis
ENSHGLG00100019596	-	100	98.837	ENSSBOG00000036179	-	100	98.837	Saimiri_boliviensis_boliviensis
ENSHGLG00100019596	-	99	98.824	ENSSHAG00000012294	SNRPF	77	98.824	Sarcophilus_harrisii
ENSHGLG00100019596	-	74	95.312	ENSSFOG00015021523	snrpf	96	95.312	Scleropages_formosus
ENSHGLG00100019596	-	87	93.333	ENSSMAG00000005533	snrpf	86	93.333	Scophthalmus_maximus
ENSHGLG00100019596	-	76	95.385	ENSSDUG00000016283	snrpf	77	95.385	Seriola_dumerili
ENSHGLG00100019596	-	87	94.667	ENSSLDG00000005119	snrpf	87	94.667	Seriola_lalandi_dorsalis
ENSHGLG00100019596	-	93	72.500	ENSSLDG00000003885	-	90	75.676	Seriola_lalandi_dorsalis
ENSHGLG00100019596	-	98	98.810	ENSSPUG00000014590	-	99	98.810	Sphenodon_punctatus
ENSHGLG00100019596	-	99	96.471	ENSSPAG00000003283	snrpf	97	96.471	Stegastes_partitus
ENSHGLG00100019596	-	100	98.837	ENSSSCG00000000895	SNRPF	100	98.837	Sus_scrofa
ENSHGLG00100019596	-	67	93.103	ENSTRUG00000014956	snrpf	84	93.103	Takifugu_rubripes
ENSHGLG00100019596	-	87	94.667	ENSTNIG00000012672	snrpf	87	94.667	Tetraodon_nigroviridis
ENSHGLG00100019596	-	87	70.667	ENSTTRG00000006070	SNRPF	87	70.667	Tursiops_truncatus
ENSHGLG00100019596	-	100	98.837	ENSUAMG00000008176	-	100	98.837	Ursus_americanus
ENSHGLG00100019596	-	100	87.209	ENSUAMG00000001101	-	88	89.333	Ursus_americanus
ENSHGLG00100019596	-	87	89.333	ENSUMAG00000006177	-	88	89.333	Ursus_maritimus
ENSHGLG00100019596	-	100	98.837	ENSUMAG00000003528	-	100	98.837	Ursus_maritimus
ENSHGLG00100019596	-	100	98.837	ENSVPAG00000008712	-	100	98.837	Vicugna_pacos
ENSHGLG00100019596	-	91	91.026	ENSVVUG00000023821	-	96	90.667	Vulpes_vulpes
ENSHGLG00100019596	-	86	75.000	ENSXETG00000021630	snrpf	87	72.368	Xenopus_tropicalis
ENSHGLG00100019596	-	98	96.429	ENSXCOG00000013860	snrpf	97	96.429	Xiphophorus_couchianus
ENSHGLG00100019596	-	98	96.429	ENSXMAG00000015448	snrpf	99	96.429	Xiphophorus_maculatus