EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00100019761 (Gene tree)
Gene ID: -
Gene Symbol: Pcbp1
Alias: -
Full Name: poly(rC) binding protein 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_male
Status: putative
Strand: Minus strand
Length: 1068 bases
Position: chrJH173576.1:311539-312606
Accession: 101726771
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00100026798	KH_1	PF00013.29	1.5e-51	1	3
ENSHGLP00100026798	KH_1	PF00013.29	1.5e-51	2	3
ENSHGLP00100026798	KH_1	PF00013.29	1.5e-51	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00100027118	-	1068	-	ENSHGLP00100026798	355 (aa)	-	G5C6V6

Gene Model

Click here to download ENSHGLG00100019761's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00100019761's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00100019761	Pcbp1	99	66.193	ENSHGLG00100013811	-	98	66.193
ENSHGLG00100019761	Pcbp1	100	99.718	ENSHGLG00100019620	-	100	99.718
ENSHGLG00100019761	Pcbp1	100	79.019	ENSHGLG00100020807	-	100	79.019
ENSHGLG00100019761	Pcbp1	99	66.484	ENSHGLG00100013590	PCBP3	91	66.484
ENSHGLG00100019761	Pcbp1	97	63.277	ENSHGLG00100000389	-	95	63.277
ENSHGLG00100019761	Pcbp1	100	81.744	ENSHGLG00100009675	PCBP2	100	81.744
ENSHGLG00100019761	Pcbp1	91	69.538	ENSHGLG00100012826	-	88	69.538
ENSHGLG00100019761	Pcbp1	98	51.124	ENSHGLG00100008748	PCBP4	77	51.124

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00100019761	Pcbp1	100	99.719	ENSG00000169564	PCBP1	100	99.719	Homo_sapiens
ENSHGLG00100019761	Pcbp1	100	96.910	ENSAMEG00000016094	PCBP1	100	96.910	Ailuropoda_melanoleuca
ENSHGLG00100019761	Pcbp1	80	95.053	ENSANAG00000031745	-	100	95.053	Aotus_nancymaae
ENSHGLG00100019761	Pcbp1	100	88.764	ENSANAG00000023938	-	100	88.764	Aotus_nancymaae
ENSHGLG00100019761	Pcbp1	100	87.921	ENSANAG00000026077	-	100	87.921	Aotus_nancymaae
ENSHGLG00100019761	Pcbp1	97	95.954	ENSANAG00000026989	-	99	95.954	Aotus_nancymaae
ENSHGLG00100019761	Pcbp1	89	87.658	ENSANAG00000027108	-	100	87.658	Aotus_nancymaae
ENSHGLG00100019761	Pcbp1	80	95.053	ENSANAG00000019364	-	100	95.053	Aotus_nancymaae
ENSHGLG00100019761	Pcbp1	80	91.873	ENSANAG00000022494	-	100	91.873	Aotus_nancymaae
ENSHGLG00100019761	Pcbp1	100	85.393	ENSANAG00000033377	-	100	85.393	Aotus_nancymaae
ENSHGLG00100019761	Pcbp1	91	99.691	ENSBTAG00000008985	PCBP1	99	99.691	Bos_taurus
ENSHGLG00100019761	Pcbp1	100	94.101	ENSCJAG00000038388	-	95	94.101	Callithrix_jacchus
ENSHGLG00100019761	Pcbp1	100	99.438	ENSCAFG00000003326	PCBP1	100	99.438	Canis_familiaris
ENSHGLG00100019761	Pcbp1	100	99.719	ENSCHIG00000007923	PCBP1	100	99.719	Capra_hircus
ENSHGLG00100019761	Pcbp1	100	99.157	ENSTSYG00000027848	PCBP1	100	99.157	Carlito_syrichta
ENSHGLG00100019761	Pcbp1	100	99.719	ENSCPOG00000013511	PCBP1	100	99.719	Cavia_porcellus
ENSHGLG00100019761	Pcbp1	100	91.011	ENSCCAG00000029186	-	98	91.011	Cebus_capucinus
ENSHGLG00100019761	Pcbp1	100	99.719	ENSCCAG00000019842	-	100	99.719	Cebus_capucinus
ENSHGLG00100019761	Pcbp1	100	99.719	ENSCATG00000015029	PCBP1	100	99.719	Cercocebus_atys
ENSHGLG00100019761	Pcbp1	100	99.157	ENSCLAG00000017909	PCBP1	100	99.157	Chinchilla_lanigera
ENSHGLG00100019761	Pcbp1	100	99.719	ENSCSAG00000019441	PCBP1	100	99.719	Chlorocebus_sabaeus
ENSHGLG00100019761	Pcbp1	100	99.719	ENSCANG00000018039	-	100	99.719	Colobus_angolensis_palliatus
ENSHGLG00100019761	Pcbp1	100	89.607	ENSCANG00000032470	-	94	89.607	Colobus_angolensis_palliatus
ENSHGLG00100019761	Pcbp1	72	84.706	ENSCANG00000033810	-	87	84.706	Colobus_angolensis_palliatus
ENSHGLG00100019761	Pcbp1	100	99.719	ENSCGRG00001015078	Pcbp1	100	99.719	Cricetulus_griseus_chok1gshd
ENSHGLG00100019761	Pcbp1	100	99.719	ENSCGRG00000018899	Pcbp1	100	99.719	Cricetulus_griseus_crigri
ENSHGLG00100019761	Pcbp1	80	99.298	ENSDNOG00000036372	PCBP1	99	99.298	Dasypus_novemcinctus
ENSHGLG00100019761	Pcbp1	100	99.719	ENSDORG00000008216	Pcbp1	100	99.719	Dipodomys_ordii
ENSHGLG00100019761	Pcbp1	100	99.719	ENSFCAG00000022238	PCBP1	100	99.719	Felis_catus
ENSHGLG00100019761	Pcbp1	100	100.000	ENSFDAG00000019637	PCBP1	100	100.000	Fukomys_damarensis
ENSHGLG00100019761	Pcbp1	100	99.719	ENSGGOG00000028130	PCBP1	100	99.719	Gorilla_gorilla
ENSHGLG00100019761	Pcbp1	100	98.028	ENSHGLG00000020243	-	100	98.028	Heterocephalus_glaber_female
ENSHGLG00100019761	Pcbp1	100	100.000	ENSHGLG00000020345	Pcbp1	100	100.000	Heterocephalus_glaber_female
ENSHGLG00100019761	Pcbp1	100	99.719	ENSSTOG00000026002	PCBP1	100	99.719	Ictidomys_tridecemlineatus
ENSHGLG00100019761	Pcbp1	100	99.719	ENSJJAG00000000737	Pcbp1	100	99.719	Jaculus_jaculus
ENSHGLG00100019761	Pcbp1	95	88.427	ENSMFAG00000003400	PCBP1	100	88.427	Macaca_fascicularis
ENSHGLG00100019761	Pcbp1	100	99.719	ENSMMUG00000038295	PCBP1	100	99.719	Macaca_mulatta
ENSHGLG00100019761	Pcbp1	100	99.719	ENSMNEG00000002934	PCBP1	100	99.719	Macaca_nemestrina
ENSHGLG00100019761	Pcbp1	100	99.719	ENSMLEG00000027389	PCBP1	100	99.719	Mandrillus_leucophaeus
ENSHGLG00100019761	Pcbp1	100	99.438	ENSMAUG00000009843	Pcbp1	100	99.438	Mesocricetus_auratus
ENSHGLG00100019761	Pcbp1	100	99.719	ENSMICG00000038221	PCBP1	100	99.719	Microcebus_murinus
ENSHGLG00100019761	Pcbp1	100	99.719	ENSMOCG00000008102	Pcbp1	100	99.719	Microtus_ochrogaster
ENSHGLG00100019761	Pcbp1	100	99.719	MGP_CAROLIEiJ_G0028598	Pcbp1	100	99.719	Mus_caroli
ENSHGLG00100019761	Pcbp1	100	99.719	ENSMUSG00000051695	Pcbp1	100	99.719	Mus_musculus
ENSHGLG00100019761	Pcbp1	100	99.719	MGP_PahariEiJ_G0022335	Pcbp1	100	99.719	Mus_pahari
ENSHGLG00100019761	Pcbp1	100	99.719	MGP_SPRETEiJ_G0029609	Pcbp1	100	99.719	Mus_spretus
ENSHGLG00100019761	Pcbp1	100	96.910	ENSMPUG00000007175	PCBP1	100	96.910	Mustela_putorius_furo
ENSHGLG00100019761	Pcbp1	100	99.719	ENSMLUG00000014173	PCBP1	100	99.719	Myotis_lucifugus
ENSHGLG00100019761	Pcbp1	100	99.719	ENSNGAG00000011957	-	100	99.719	Nannospalax_galili
ENSHGLG00100019761	Pcbp1	100	99.719	ENSNGAG00000014909	-	100	99.719	Nannospalax_galili
ENSHGLG00100019761	Pcbp1	100	99.719	ENSNLEG00000018722	PCBP1	100	99.719	Nomascus_leucogenys
ENSHGLG00100019761	Pcbp1	100	83.146	ENSODEG00000000263	PCBP1	100	83.146	Octodon_degus
ENSHGLG00100019761	Pcbp1	100	99.719	ENSOCUG00000003634	PCBP1	100	99.719	Oryctolagus_cuniculus
ENSHGLG00100019761	Pcbp1	100	96.910	ENSOGAG00000028946	PCBP1	100	96.910	Otolemur_garnettii
ENSHGLG00100019761	Pcbp1	100	99.719	ENSOARG00000019516	PCBP1	100	99.719	Ovis_aries
ENSHGLG00100019761	Pcbp1	98	100.000	ENSPPAG00000036116	PCBP1	99	98.599	Pan_paniscus
ENSHGLG00100019761	Pcbp1	100	99.719	ENSPPRG00000020533	PCBP1	100	99.719	Panthera_pardus
ENSHGLG00100019761	Pcbp1	100	99.719	ENSPTIG00000007318	PCBP1	100	99.719	Panthera_tigris_altaica
ENSHGLG00100019761	Pcbp1	100	99.719	ENSPTRG00000012025	PCBP1	100	99.719	Pan_troglodytes
ENSHGLG00100019761	Pcbp1	100	99.719	ENSPANG00000011314	PCBP1	100	99.719	Papio_anubis
ENSHGLG00100019761	Pcbp1	100	99.719	ENSPPYG00000012328	PCBP1	100	99.719	Pongo_abelii
ENSHGLG00100019761	Pcbp1	100	99.719	ENSPCOG00000026934	PCBP1	100	99.719	Propithecus_coquereli
ENSHGLG00100019761	Pcbp1	93	98.494	ENSRROG00000012514	-	100	98.494	Rhinopithecus_roxellana
ENSHGLG00100019761	Pcbp1	100	98.876	ENSRROG00000009684	-	95	98.876	Rhinopithecus_roxellana
ENSHGLG00100019761	Pcbp1	100	83.146	ENSSBOG00000035309	-	94	83.146	Saimiri_boliviensis_boliviensis
ENSHGLG00100019761	Pcbp1	100	99.438	ENSSSCG00000027224	PCBP1	100	99.438	Sus_scrofa
ENSHGLG00100019761	Pcbp1	51	100.000	ENSTBEG00000015706	-	51	100.000	Tupaia_belangeri
ENSHGLG00100019761	Pcbp1	91	99.381	ENSVVUG00000028033	PCBP1	99	99.381	Vulpes_vulpes