EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000000082 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 5070 bases
Position: chr1:653737-658806
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000000075	MMR_HSR1	PF01926.23	4.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000000101	-	696	-	ENSIPUP00000000075	231 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000000082's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000000082's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000000082	-	97	44.783	ENSIPUG00000009201	-	91	44.783
ENSIPUG00000000082	-	93	41.935	ENSIPUG00000013512	-	53	41.935

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000000082	-	86	44.608	ENSAPOG00000006213	-	69	44.608	Acanthochromis_polyacanthus
ENSIPUG00000000082	-	87	45.933	ENSACIG00000023712	-	52	45.933	Amphilophus_citrinellus
ENSIPUG00000000082	-	83	37.949	ENSACIG00000014950	-	83	37.949	Amphilophus_citrinellus
ENSIPUG00000000082	-	84	40.704	ENSATEG00000008595	-	70	40.704	Anabas_testudineus
ENSIPUG00000000082	-	86	48.293	ENSACLG00000015361	-	51	48.293	Astatotilapia_calliptera
ENSIPUG00000000082	-	85	43.069	ENSACLG00000023033	-	51	43.069	Astatotilapia_calliptera
ENSIPUG00000000082	-	90	43.842	ENSAMXG00000030535	-	57	43.842	Astyanax_mexicanus
ENSIPUG00000000082	-	82	46.875	ENSCVAG00000014791	-	53	46.875	Cyprinodon_variegatus
ENSIPUG00000000082	-	88	44.928	ENSCVAG00000022669	-	73	44.928	Cyprinodon_variegatus
ENSIPUG00000000082	-	88	46.190	ENSCVAG00000022676	-	62	46.190	Cyprinodon_variegatus
ENSIPUG00000000082	-	95	41.892	ENSDARG00000100858	zgc:171695	53	41.892	Danio_rerio
ENSIPUG00000000082	-	88	42.718	ENSDARG00000039888	CR855393.1	58	42.718	Danio_rerio
ENSIPUG00000000082	-	86	41.872	ENSELUG00000008413	-	50	41.872	Esox_lucius
ENSIPUG00000000082	-	93	39.640	ENSFHEG00000002160	-	70	39.640	Fundulus_heteroclitus
ENSIPUG00000000082	-	80	41.146	ENSGMOG00000019786	-	94	41.146	Gadus_morhua
ENSIPUG00000000082	-	70	40.828	ENSGMOG00000020208	-	93	40.828	Gadus_morhua
ENSIPUG00000000082	-	79	44.385	ENSGMOG00000008232	-	55	44.624	Gadus_morhua
ENSIPUG00000000082	-	58	42.857	ENSGMOG00000019744	-	79	42.857	Gadus_morhua
ENSIPUG00000000082	-	80	41.667	ENSGMOG00000020059	-	93	41.667	Gadus_morhua
ENSIPUG00000000082	-	97	37.281	ENSGAFG00000005050	-	88	37.281	Gambusia_affinis
ENSIPUG00000000082	-	86	41.667	ENSGAFG00000018470	-	78	41.667	Gambusia_affinis
ENSIPUG00000000082	-	86	45.098	ENSGACG00000005035	-	51	45.098	Gasterosteus_aculeatus
ENSIPUG00000000082	-	67	44.375	ENSGACG00000015787	-	73	44.375	Gasterosteus_aculeatus
ENSIPUG00000000082	-	87	44.878	ENSGACG00000015437	-	52	44.878	Gasterosteus_aculeatus
ENSIPUG00000000082	-	84	44.444	ENSHBUG00000023729	-	52	44.444	Haplochromis_burtoni
ENSIPUG00000000082	-	86	42.927	ENSHBUG00000007413	-	82	42.927	Haplochromis_burtoni
ENSIPUG00000000082	-	78	43.548	ENSLBEG00000028432	-	70	43.548	Labrus_bergylta
ENSIPUG00000000082	-	86	40.686	ENSLBEG00000012781	-	77	40.686	Labrus_bergylta
ENSIPUG00000000082	-	85	37.879	ENSLBEG00000019795	-	83	37.879	Labrus_bergylta
ENSIPUG00000000082	-	87	40.976	ENSLOCG00000017620	-	59	40.976	Lepisosteus_oculatus
ENSIPUG00000000082	-	86	42.857	ENSMAMG00000015204	-	80	42.857	Mastacembelus_armatus
ENSIPUG00000000082	-	86	46.305	ENSMZEG00005023315	-	51	46.305	Maylandia_zebra
ENSIPUG00000000082	-	84	47.500	ENSMZEG00005004397	-	69	48.500	Maylandia_zebra
ENSIPUG00000000082	-	84	44.949	ENSMZEG00005023309	-	52	44.949	Maylandia_zebra
ENSIPUG00000000082	-	88	43.062	ENSMMOG00000011295	-	75	43.062	Mola_mola
ENSIPUG00000000082	-	84	47.087	ENSMMOG00000015162	-	79	47.087	Mola_mola
ENSIPUG00000000082	-	84	43.069	ENSNBRG00000006565	-	64	43.069	Neolamprologus_brichardi
ENSIPUG00000000082	-	89	42.105	ENSONIG00000017927	-	63	42.105	Oreochromis_niloticus
ENSIPUG00000000082	-	85	48.000	ENSONIG00000013895	-	79	48.000	Oreochromis_niloticus
ENSIPUG00000000082	-	85	43.564	ENSPMGG00000002690	-	55	43.564	Periophthalmus_magnuspinnatus
ENSIPUG00000000082	-	83	36.041	ENSPMGG00000008676	-	55	36.041	Periophthalmus_magnuspinnatus
ENSIPUG00000000082	-	89	42.654	ENSPMGG00000020583	-	50	42.654	Periophthalmus_magnuspinnatus
ENSIPUG00000000082	-	96	35.398	ENSPFOG00000023267	-	50	35.398	Poecilia_formosa
ENSIPUG00000000082	-	84	44.828	ENSPLAG00000019926	-	73	44.828	Poecilia_latipinna
ENSIPUG00000000082	-	93	48.309	ENSPREG00000007255	-	52	48.309	Poecilia_reticulata
ENSIPUG00000000082	-	84	45.226	ENSPNYG00000016575	-	67	45.226	Pundamilia_nyererei
ENSIPUG00000000082	-	83	47.396	ENSPNAG00000011130	-	65	47.396	Pygocentrus_nattereri
ENSIPUG00000000082	-	94	41.256	ENSSDUG00000000370	-	87	41.256	Seriola_dumerili
ENSIPUG00000000082	-	85	42.857	ENSSDUG00000005919	-	70	42.857	Seriola_dumerili
ENSIPUG00000000082	-	84	45.729	ENSSDUG00000021349	-	86	45.729	Seriola_dumerili
ENSIPUG00000000082	-	91	43.519	ENSSDUG00000000316	-	89	43.519	Seriola_dumerili
ENSIPUG00000000082	-	84	42.786	ENSSLDG00000017661	-	86	42.786	Seriola_lalandi_dorsalis
ENSIPUG00000000082	-	87	46.829	ENSSLDG00000018054	-	84	46.829	Seriola_lalandi_dorsalis
ENSIPUG00000000082	-	81	42.268	ENSSPAG00000015996	-	73	42.268	Stegastes_partitus
ENSIPUG00000000082	-	88	43.541	ENSSPAG00000003300	-	82	43.541	Stegastes_partitus
ENSIPUG00000000082	-	86	42.857	ENSTRUG00000017314	-	86	42.857	Takifugu_rubripes
ENSIPUG00000000082	-	87	42.233	ENSTRUG00000001460	-	63	42.233	Takifugu_rubripes
ENSIPUG00000000082	-	87	44.608	ENSTRUG00000021059	-	76	44.608	Takifugu_rubripes
ENSIPUG00000000082	-	87	45.854	ENSTNIG00000006523	-	52	45.854	Tetraodon_nigroviridis
ENSIPUG00000000082	-	87	43.902	ENSTNIG00000005878	-	54	43.902	Tetraodon_nigroviridis
ENSIPUG00000000082	-	94	42.152	ENSTNIG00000003332	-	57	42.152	Tetraodon_nigroviridis
ENSIPUG00000000082	-	94	43.891	ENSXCOG00000001022	-	56	43.231	Xiphophorus_couchianus