EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000000131 (Gene tree)
Gene ID: 108271697
Gene Symbol: snai2
Alias: SLUG|SLUGH|SLUGH1|SNAIL2
Full Name: snail family transcriptional repressor 2
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 4082 bases
Position: chr1:2015791-2019872
Accession: 108271697
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000000147	zf-C2H2	PF00096.26	8.4e-24	1	4
ENSIPUP00000000147	zf-C2H2	PF00096.26	8.4e-24	2	4
ENSIPUP00000000147	zf-C2H2	PF00096.26	8.4e-24	3	4
ENSIPUP00000000147	zf-C2H2	PF00096.26	8.4e-24	4	4
ENSIPUP00000000148	zf-C2H2	PF00096.26	8.8e-23	1	4
ENSIPUP00000000148	zf-C2H2	PF00096.26	8.8e-23	2	4
ENSIPUP00000000148	zf-C2H2	PF00096.26	8.8e-23	3	4
ENSIPUP00000000148	zf-C2H2	PF00096.26	8.8e-23	4	4
ENSIPUP00000000148	zf-met	PF12874.7	6.1e-06	1	1
ENSIPUP00000000147	zf-met	PF12874.7	2.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000000176	-	3003	-	ENSIPUP00000000148	279 (aa)	-	-
ENSIPUT00000000175	-	2958	XM_017479424	ENSIPUP00000000147	264 (aa)	XP_017334913	A0A2D0RWN8

Gene Model

Click here to download ENSIPUG00000000131's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu04520	Adherens junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000000131's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000000131	snai2	58	42.157	ENSIPUG00000021527	-	94	42.157
ENSIPUG00000000131	snai2	51	38.060	ENSIPUG00000007076	-	67	38.636
ENSIPUG00000000131	snai2	57	42.276	ENSIPUG00000001248	prdm5	67	40.714
ENSIPUG00000000131	snai2	53	42.697	ENSIPUG00000021484	-	98	42.697
ENSIPUG00000000131	snai2	53	40.708	ENSIPUG00000012830	-	77	40.708
ENSIPUG00000000131	snai2	89	39.423	ENSIPUG00000023688	-	93	39.130
ENSIPUG00000000131	snai2	52	39.496	ENSIPUG00000021434	-	95	39.496
ENSIPUG00000000131	snai2	51	40.984	ENSIPUG00000002655	-	96	40.984
ENSIPUG00000000131	snai2	58	39.216	ENSIPUG00000009750	-	77	39.216
ENSIPUG00000000131	snai2	61	41.045	ENSIPUG00000015400	-	89	40.816
ENSIPUG00000000131	snai2	64	38.889	ENSIPUG00000022741	-	79	38.889
ENSIPUG00000000131	snai2	61	39.815	ENSIPUG00000023635	-	91	39.474
ENSIPUG00000000131	snai2	53	38.525	ENSIPUG00000013065	-	93	38.028
ENSIPUG00000000131	snai2	84	37.956	ENSIPUG00000006916	-	76	37.956
ENSIPUG00000000131	snai2	50	39.316	ENSIPUG00000015294	-	56	39.316
ENSIPUG00000000131	snai2	65	42.708	ENSIPUG00000001941	-	89	42.708
ENSIPUG00000000131	snai2	51	39.706	ENSIPUG00000021518	-	86	39.706
ENSIPUG00000000131	snai2	60	38.793	ENSIPUG00000021515	-	84	38.793
ENSIPUG00000000131	snai2	76	40.741	ENSIPUG00000005733	-	67	40.741
ENSIPUG00000000131	snai2	69	40.000	ENSIPUG00000015468	-	79	40.244
ENSIPUG00000000131	snai2	88	30.660	ENSIPUG00000012960	-	63	37.313
ENSIPUG00000000131	snai2	57	32.609	ENSIPUG00000011258	-	80	32.609
ENSIPUG00000000131	snai2	56	34.058	ENSIPUG00000008581	znf319b	82	34.058
ENSIPUG00000000131	snai2	52	40.602	ENSIPUG00000003960	-	88	40.714
ENSIPUG00000000131	snai2	99	50.360	ENSIPUG00000015844	snai1b	99	51.237
ENSIPUG00000000131	snai2	51	38.793	ENSIPUG00000005581	-	72	38.793
ENSIPUG00000000131	snai2	52	37.778	ENSIPUG00000021441	-	79	37.778
ENSIPUG00000000131	snai2	62	41.905	ENSIPUG00000011652	znf648	75	41.905
ENSIPUG00000000131	snai2	86	42.045	ENSIPUG00000016009	znf596	62	42.991
ENSIPUG00000000131	snai2	62	52.308	ENSIPUG00000004905	znf236	51	47.945
ENSIPUG00000000131	snai2	59	42.105	ENSIPUG00000015233	-	56	42.105
ENSIPUG00000000131	snai2	78	35.714	ENSIPUG00000006936	-	88	35.714
ENSIPUG00000000131	snai2	53	42.857	ENSIPUG00000023761	-	58	42.857
ENSIPUG00000000131	snai2	61	40.000	ENSIPUG00000003011	-	56	40.000
ENSIPUG00000000131	snai2	53	39.370	ENSIPUG00000022266	ZNF135	59	39.370
ENSIPUG00000000131	snai2	98	41.852	ENSIPUG00000005547	-	96	41.852
ENSIPUG00000000131	snai2	73	39.474	ENSIPUG00000022751	-	96	39.080
ENSIPUG00000000131	snai2	51	40.196	ENSIPUG00000021472	-	71	37.956
ENSIPUG00000000131	snai2	95	38.686	ENSIPUG00000016075	-	95	38.686
ENSIPUG00000000131	snai2	64	38.519	ENSIPUG00000013315	-	92	39.286
ENSIPUG00000000131	snai2	51	37.500	ENSIPUG00000015203	-	64	36.567
ENSIPUG00000000131	snai2	53	32.353	ENSIPUG00000003040	zbtb47a	70	32.353
ENSIPUG00000000131	snai2	54	38.318	ENSIPUG00000015177	-	55	38.318
ENSIPUG00000000131	snai2	76	41.509	ENSIPUG00000011073	-	97	41.509
ENSIPUG00000000131	snai2	98	41.606	ENSIPUG00000004551	scrt1a	96	40.876
ENSIPUG00000000131	snai2	52	41.892	ENSIPUG00000005339	-	82	41.892
ENSIPUG00000000131	snai2	50	37.594	ENSIPUG00000021556	-	81	37.594
ENSIPUG00000000131	snai2	86	37.037	ENSIPUG00000012109	ZN12	50	37.037
ENSIPUG00000000131	snai2	60	37.037	ENSIPUG00000015121	-	67	37.383
ENSIPUG00000000131	snai2	52	42.424	ENSIPUG00000019205	-	56	42.424
ENSIPUG00000000131	snai2	62	38.686	ENSIPUG00000017575	-	61	38.686
ENSIPUG00000000131	snai2	61	37.692	ENSIPUG00000004428	-	72	37.692
ENSIPUG00000000131	snai2	50	39.706	ENSIPUG00000007934	-	94	39.706
ENSIPUG00000000131	snai2	51	33.333	ENSIPUG00000011399	zbtb47b	65	33.333
ENSIPUG00000000131	snai2	51	37.226	ENSIPUG00000021998	-	90	37.226

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000000131	snai2	100	69.403	ENSG00000019549	SNAI2	100	68.864	Homo_sapiens
ENSIPUG00000000131	snai2	99	49.310	ENSG00000185669	SNAI3	99	48.621	Homo_sapiens
ENSIPUG00000000131	snai2	100	70.522	ENSAMEG00000009606	SNAI2	100	70.896	Ailuropoda_melanoleuca
ENSIPUG00000000131	snai2	99	48.276	ENSANAG00000032748	SNAI3	99	48.276	Aotus_nancymaae
ENSIPUG00000000131	snai2	100	69.403	ENSANAG00000021163	SNAI2	100	68.864	Aotus_nancymaae
ENSIPUG00000000131	snai2	99	46.284	ENSBTAG00000017528	SNAI3	99	46.622	Bos_taurus
ENSIPUG00000000131	snai2	100	68.657	ENSBTAG00000013227	SNAI2	100	69.030	Bos_taurus
ENSIPUG00000000131	snai2	100	69.403	ENSCJAG00000013499	SNAI2	100	68.864	Callithrix_jacchus
ENSIPUG00000000131	snai2	100	69.776	ENSCAFG00000006638	SNAI2	100	70.149	Canis_familiaris
ENSIPUG00000000131	snai2	99	47.931	ENSCAFG00000029458	SNAI3	99	46.918	Canis_familiaris
ENSIPUG00000000131	snai2	100	69.776	ENSCAFG00020015384	SNAI2	100	70.149	Canis_lupus_dingo
ENSIPUG00000000131	snai2	99	48.276	ENSCAFG00020004719	SNAI3	99	47.260	Canis_lupus_dingo
ENSIPUG00000000131	snai2	99	48.814	ENSCHIG00000018087	SNAI3	99	47.619	Capra_hircus
ENSIPUG00000000131	snai2	100	68.284	ENSCHIG00000024410	SNAI2	100	68.657	Capra_hircus
ENSIPUG00000000131	snai2	90	68.880	ENSTSYG00000030892	SNAI2	90	69.710	Carlito_syrichta
ENSIPUG00000000131	snai2	83	70.404	ENSCAPG00000013078	SNAI2	100	70.852	Cavia_aperea
ENSIPUG00000000131	snai2	100	69.403	ENSCCAG00000024100	SNAI2	100	68.864	Cebus_capucinus
ENSIPUG00000000131	snai2	100	69.403	ENSCATG00000028656	SNAI2	100	68.864	Cercocebus_atys
ENSIPUG00000000131	snai2	99	50.000	ENSCATG00000031714	SNAI3	99	49.310	Cercocebus_atys
ENSIPUG00000000131	snai2	100	70.149	ENSCLAG00000011797	SNAI2	100	70.522	Chinchilla_lanigera
ENSIPUG00000000131	snai2	100	69.403	ENSCSAG00000014787	SNAI2	100	68.864	Chlorocebus_sabaeus
ENSIPUG00000000131	snai2	100	70.522	ENSCPBG00000020255	SNAI2	100	70.896	Chrysemys_picta_bellii
ENSIPUG00000000131	snai2	99	50.842	ENSCPBG00000023474	SNAI3	99	48.852	Chrysemys_picta_bellii
ENSIPUG00000000131	snai2	50	64.885	ENSCSAVG00000009819	-	68	64.885	Ciona_savignyi
ENSIPUG00000000131	snai2	100	69.403	ENSCANG00000029656	SNAI2	100	68.864	Colobus_angolensis_palliatus
ENSIPUG00000000131	snai2	100	69.403	ENSCGRG00001013674	Snai2	100	69.776	Cricetulus_griseus_chok1gshd
ENSIPUG00000000131	snai2	99	46.552	ENSCGRG00001011389	Snai3	51	72.603	Cricetulus_griseus_chok1gshd
ENSIPUG00000000131	snai2	99	46.552	ENSCGRG00000014932	Snai3	51	72.603	Cricetulus_griseus_crigri
ENSIPUG00000000131	snai2	100	69.403	ENSCGRG00000012119	Snai2	100	69.776	Cricetulus_griseus_crigri
ENSIPUG00000000131	snai2	78	36.406	ENSDNOG00000035204	-	100	36.406	Dasypus_novemcinctus
ENSIPUG00000000131	snai2	100	67.910	ENSDORG00000029620	Snai2	100	69.288	Dipodomys_ordii
ENSIPUG00000000131	snai2	99	48.148	ENSECAG00000012131	SNAI3	99	49.320	Equus_caballus
ENSIPUG00000000131	snai2	98	45.238	ENSEEUG00000000841	SNAI3	99	45.390	Erinaceus_europaeus
ENSIPUG00000000131	snai2	100	73.529	ENSELUG00000021795	SNAI2	79	73.529	Esox_lucius
ENSIPUG00000000131	snai2	99	54.355	ENSELUG00000018742	-	99	54.355	Esox_lucius
ENSIPUG00000000131	snai2	98	45.487	ENSFCAG00000043885	SNAI3	99	45.487	Felis_catus
ENSIPUG00000000131	snai2	86	64.192	ENSFALG00000012974	-	96	64.629	Ficedula_albicollis
ENSIPUG00000000131	snai2	100	70.522	ENSFDAG00000016958	SNAI2	100	70.896	Fukomys_damarensis
ENSIPUG00000000131	snai2	99	49.498	ENSGAGG00000023571	SNAI3	51	80.986	Gopherus_agassizii
ENSIPUG00000000131	snai2	100	70.522	ENSGAGG00000000426	SNAI2	100	70.896	Gopherus_agassizii
ENSIPUG00000000131	snai2	100	69.403	ENSGGOG00000000959	SNAI2	100	68.864	Gorilla_gorilla
ENSIPUG00000000131	snai2	99	49.655	ENSGGOG00000012559	SNAI3	99	48.621	Gorilla_gorilla
ENSIPUG00000000131	snai2	100	71.161	ENSHCOG00000019435	SNAI2	100	71.161	Hippocampus_comes
ENSIPUG00000000131	snai2	100	70.149	ENSSTOG00000028743	SNAI2	100	70.522	Ictidomys_tridecemlineatus
ENSIPUG00000000131	snai2	99	48.966	ENSJJAG00000019934	Snai3	99	48.966	Jaculus_jaculus
ENSIPUG00000000131	snai2	53	84.286	ENSLOCG00000004887	SNAI3	86	84.286	Lepisosteus_oculatus
ENSIPUG00000000131	snai2	100	71.786	ENSLOCG00000005992	SNAI2	100	71.786	Lepisosteus_oculatus
ENSIPUG00000000131	snai2	100	70.522	ENSLAFG00000009299	SNAI2	100	70.896	Loxodonta_africana
ENSIPUG00000000131	snai2	99	53.623	ENSLAFG00000005117	SNAI3	99	52.899	Loxodonta_africana
ENSIPUG00000000131	snai2	100	69.403	ENSMFAG00000046061	SNAI2	100	68.864	Macaca_fascicularis
ENSIPUG00000000131	snai2	99	50.340	ENSMFAG00000032064	SNAI3	99	49.655	Macaca_fascicularis
ENSIPUG00000000131	snai2	100	69.403	ENSMMUG00000016195	SNAI2	100	68.864	Macaca_mulatta
ENSIPUG00000000131	snai2	99	50.340	ENSMMUG00000008716	SNAI3	99	49.655	Macaca_mulatta
ENSIPUG00000000131	snai2	100	69.403	ENSMNEG00000034216	SNAI2	100	68.864	Macaca_nemestrina
ENSIPUG00000000131	snai2	99	50.340	ENSMNEG00000045515	SNAI3	99	49.655	Macaca_nemestrina
ENSIPUG00000000131	snai2	91	51.351	ENSMLEG00000033191	SNAI3	81	50.579	Mandrillus_leucophaeus
ENSIPUG00000000131	snai2	100	69.403	ENSMLEG00000034407	SNAI2	100	68.864	Mandrillus_leucophaeus
ENSIPUG00000000131	snai2	100	69.030	ENSMAUG00000008119	Snai2	100	69.403	Mesocricetus_auratus
ENSIPUG00000000131	snai2	99	47.059	ENSMAUG00000001685	Snai3	99	46.780	Mesocricetus_auratus
ENSIPUG00000000131	snai2	99	47.203	ENSMOCG00000003536	Snai3	51	71.233	Microtus_ochrogaster
ENSIPUG00000000131	snai2	100	69.776	ENSMOCG00000006622	Snai2	100	70.149	Microtus_ochrogaster
ENSIPUG00000000131	snai2	100	71.642	ENSMODG00000010173	SNAI2	100	71.269	Monodelphis_domestica
ENSIPUG00000000131	snai2	100	69.145	MGP_CAROLIEiJ_G0020483	Snai2	100	69.888	Mus_caroli
ENSIPUG00000000131	snai2	99	47.766	MGP_CAROLIEiJ_G0031662	Snai3	99	44.839	Mus_caroli
ENSIPUG00000000131	snai2	99	47.931	ENSMUSG00000006587	Snai3	99	45.161	Mus_musculus
ENSIPUG00000000131	snai2	100	69.145	ENSMUSG00000022676	Snai2	100	69.888	Mus_musculus
ENSIPUG00000000131	snai2	100	69.145	MGP_PahariEiJ_G0016188	Snai2	100	69.888	Mus_pahari
ENSIPUG00000000131	snai2	99	47.260	MGP_PahariEiJ_G0023260	Snai3	99	46.575	Mus_pahari
ENSIPUG00000000131	snai2	100	69.517	MGP_SPRETEiJ_G0021379	Snai2	100	70.260	Mus_spretus
ENSIPUG00000000131	snai2	99	47.931	MGP_SPRETEiJ_G0032780	Snai3	99	45.161	Mus_spretus
ENSIPUG00000000131	snai2	99	47.038	ENSMPUG00000008104	SNAI3	99	47.038	Mustela_putorius_furo
ENSIPUG00000000131	snai2	100	70.522	ENSMPUG00000010793	SNAI2	100	70.896	Mustela_putorius_furo
ENSIPUG00000000131	snai2	100	69.776	ENSMLUG00000001086	SNAI2	100	69.597	Myotis_lucifugus
ENSIPUG00000000131	snai2	99	48.136	ENSNGAG00000023039	Snai3	99	48.070	Nannospalax_galili
ENSIPUG00000000131	snai2	100	69.403	ENSNLEG00000013421	SNAI2	100	68.864	Nomascus_leucogenys
ENSIPUG00000000131	snai2	99	49.310	ENSNLEG00000000595	SNAI3	99	49.310	Nomascus_leucogenys
ENSIPUG00000000131	snai2	97	70.881	ENSMEUG00000009510	SNAI2	100	70.498	Notamacropus_eugenii
ENSIPUG00000000131	snai2	100	69.776	ENSOANG00000007267	SNAI2	100	70.149	Ornithorhynchus_anatinus
ENSIPUG00000000131	snai2	99	48.252	ENSOGAG00000000419	SNAI3	99	48.252	Otolemur_garnettii
ENSIPUG00000000131	snai2	100	68.284	ENSOARG00000013030	SNAI2	100	68.657	Ovis_aries
ENSIPUG00000000131	snai2	100	69.403	ENSPPAG00000015662	SNAI2	100	68.864	Pan_paniscus
ENSIPUG00000000131	snai2	99	48.276	ENSPPAG00000043301	SNAI3	99	48.276	Pan_paniscus
ENSIPUG00000000131	snai2	100	70.522	ENSPPRG00000012562	-	100	70.896	Panthera_pardus
ENSIPUG00000000131	snai2	98	45.848	ENSPPRG00000008511	SNAI3	99	45.848	Panthera_pardus
ENSIPUG00000000131	snai2	90	69.710	ENSPTIG00000007593	SNAI2	76	70.539	Panthera_tigris_altaica
ENSIPUG00000000131	snai2	100	69.403	ENSPTRG00000020235	SNAI2	100	68.864	Pan_troglodytes
ENSIPUG00000000131	snai2	99	49.310	ENSPTRG00000008460	SNAI3	99	48.621	Pan_troglodytes
ENSIPUG00000000131	snai2	99	50.340	ENSPANG00000000509	SNAI3	99	49.655	Papio_anubis
ENSIPUG00000000131	snai2	100	69.403	ENSPANG00000017540	SNAI2	100	68.864	Papio_anubis
ENSIPUG00000000131	snai2	100	74.621	ENSPKIG00000002254	SNAI2	100	74.621	Paramormyrops_kingsleyae
ENSIPUG00000000131	snai2	99	53.716	ENSPKIG00000007872	SNAI3	99	52.703	Paramormyrops_kingsleyae
ENSIPUG00000000131	snai2	100	70.149	ENSPSIG00000016395	SNAI2	100	70.522	Pelodiscus_sinensis
ENSIPUG00000000131	snai2	77	59.330	ENSPSIG00000004262	SNAI3	78	58.852	Pelodiscus_sinensis
ENSIPUG00000000131	snai2	100	73.162	ENSPMGG00000013179	SNAI2	100	72.794	Periophthalmus_magnuspinnatus
ENSIPUG00000000131	snai2	100	70.149	ENSPEMG00000011739	Snai2	100	70.522	Peromyscus_maniculatus_bairdii
ENSIPUG00000000131	snai2	100	71.642	ENSPCIG00000025156	SNAI2	100	71.269	Phascolarctos_cinereus
ENSIPUG00000000131	snai2	90	71.084	ENSPREG00000008528	SNAI2	93	68.561	Poecilia_reticulata
ENSIPUG00000000131	snai2	100	69.403	ENSPPYG00000018578	SNAI2	100	68.864	Pongo_abelii
ENSIPUG00000000131	snai2	99	50.345	ENSPPYG00000007643	SNAI3	99	50.345	Pongo_abelii
ENSIPUG00000000131	snai2	100	70.896	ENSPCOG00000015656	SNAI2	100	71.269	Propithecus_coquereli
ENSIPUG00000000131	snai2	100	70.149	ENSPVAG00000009457	SNAI2	100	69.597	Pteropus_vampyrus
ENSIPUG00000000131	snai2	99	47.241	ENSRNOG00000013586	Snai3	99	47.241	Rattus_norvegicus
ENSIPUG00000000131	snai2	99	49.655	ENSRBIG00000025770	SNAI3	99	49.655	Rhinopithecus_bieti
ENSIPUG00000000131	snai2	100	69.403	ENSRBIG00000041133	SNAI2	100	68.864	Rhinopithecus_bieti
ENSIPUG00000000131	snai2	100	69.403	ENSRROG00000032273	SNAI2	100	68.864	Rhinopithecus_roxellana
ENSIPUG00000000131	snai2	99	49.310	ENSRROG00000032757	SNAI3	99	49.310	Rhinopithecus_roxellana
ENSIPUG00000000131	snai2	100	69.403	ENSSBOG00000035774	SNAI2	100	68.864	Saimiri_boliviensis_boliviensis
ENSIPUG00000000131	snai2	100	71.642	ENSSHAG00000004205	SNAI2	100	71.269	Sarcophilus_harrisii
ENSIPUG00000000131	snai2	99	50.809	ENSSFOG00015016115	snai3	93	50.329	Scleropages_formosus
ENSIPUG00000000131	snai2	100	73.665	ENSSFOG00015018025	SNAI2	100	73.665	Scleropages_formosus
ENSIPUG00000000131	snai2	100	70.149	ENSSPUG00000005427	-	100	70.522	Sphenodon_punctatus
ENSIPUG00000000131	snai2	100	70.522	ENSSSCG00000039568	SNAI2	100	70.896	Sus_scrofa
ENSIPUG00000000131	snai2	99	46.831	ENSTTRG00000006262	SNAI3	99	46.831	Tursiops_truncatus
ENSIPUG00000000131	snai2	86	71.739	ENSUAMG00000014942	SNAI2	100	72.609	Ursus_americanus
ENSIPUG00000000131	snai2	99	48.110	ENSUAMG00000020030	SNAI3	99	46.865	Ursus_americanus
ENSIPUG00000000131	snai2	98	69.582	ENSUMAG00000006525	SNAI2	100	69.962	Ursus_maritimus
ENSIPUG00000000131	snai2	99	48.621	ENSVVUG00000003233	SNAI3	99	46.367	Vulpes_vulpes
ENSIPUG00000000131	snai2	100	70.149	ENSVVUG00000017625	SNAI2	100	70.522	Vulpes_vulpes
ENSIPUG00000000131	snai2	100	70.149	ENSXETG00000024006	snai2	100	70.149	Xenopus_tropicalis