EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000000210 (Gene tree)
Gene ID: 108259113
Gene Symbol: srp72
Alias: wu:fi03d11
Full Name: signal recognition particle 72
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Plus strand
Length: 16355 bases
Position: chr2:23180951-23197305
Accession: 108259113
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000000255	SRP72	PF08492.12	1.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000000287	-	2153	XM_017458334	ENSIPUP00000000255	665 (aa)	XP_017313823	A0A2D0Q532

Gene Model

Click here to download ENSIPUG00000000210's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000000210's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000000210	srp72	97	76.498	ENSG00000174780	SRP72	99	76.612	Homo_sapiens
ENSIPUG00000000210	srp72	100	72.836	ENSAPOG00000019438	srp72	100	73.731	Acanthochromis_polyacanthus
ENSIPUG00000000210	srp72	96	76.983	ENSAMEG00000008469	SRP72	99	76.751	Ailuropoda_melanoleuca
ENSIPUG00000000210	srp72	100	82.414	ENSACIG00000000488	srp72	100	82.414	Amphilophus_citrinellus
ENSIPUG00000000210	srp72	100	83.832	ENSAOCG00000011256	srp72	100	84.731	Amphiprion_ocellaris
ENSIPUG00000000210	srp72	100	84.581	ENSAPEG00000001512	srp72	100	84.581	Amphiprion_percula
ENSIPUG00000000210	srp72	93	84.253	ENSATEG00000006781	srp72	99	84.253	Anabas_testudineus
ENSIPUG00000000210	srp72	99	76.842	ENSAPLG00000008751	SRP72	99	76.842	Anas_platyrhynchos
ENSIPUG00000000210	srp72	97	76.352	ENSACAG00000002381	SRP72	98	76.198	Anolis_carolinensis
ENSIPUG00000000210	srp72	95	77.215	ENSANAG00000020836	-	94	77.215	Aotus_nancymaae
ENSIPUG00000000210	srp72	100	83.857	ENSACLG00000014617	srp72	100	83.857	Astatotilapia_calliptera
ENSIPUG00000000210	srp72	98	91.692	ENSAMXG00000004011	srp72	100	91.429	Astyanax_mexicanus
ENSIPUG00000000210	srp72	97	75.883	ENSBTAG00000010593	SRP72	99	76.012	Bos_taurus
ENSIPUG00000000210	srp72	97	75.730	ENSCJAG00000017998	SRP72	99	75.862	Callithrix_jacchus
ENSIPUG00000000210	srp72	97	76.651	ENSCAFG00000002244	SRP72	99	76.762	Canis_familiaris
ENSIPUG00000000210	srp72	97	76.651	ENSCAFG00020027338	SRP72	98	77.015	Canis_lupus_dingo
ENSIPUG00000000210	srp72	97	74.540	ENSCHIG00000021465	SRP72	99	74.701	Capra_hircus
ENSIPUG00000000210	srp72	97	76.780	ENSTSYG00000010571	-	100	75.923	Carlito_syrichta
ENSIPUG00000000210	srp72	85	56.424	ENSCAPG00000016668	SRP72	100	66.926	Cavia_aperea
ENSIPUG00000000210	srp72	97	76.805	ENSCPOG00000000218	SRP72	99	76.912	Cavia_porcellus
ENSIPUG00000000210	srp72	97	74.154	ENSCCAG00000030830	-	99	74.324	Cebus_capucinus
ENSIPUG00000000210	srp72	95	77.057	ENSCCAG00000030683	-	94	77.057	Cebus_capucinus
ENSIPUG00000000210	srp72	97	76.190	ENSCATG00000008072	SRP72	99	76.312	Cercocebus_atys
ENSIPUG00000000210	srp72	98	60.123	ENSCATG00000045359	-	95	60.276	Cercocebus_atys
ENSIPUG00000000210	srp72	97	76.498	ENSCLAG00000003571	SRP72	99	76.462	Chinchilla_lanigera
ENSIPUG00000000210	srp72	97	72.197	ENSCSAG00000005079	SRP72	99	72.414	Chlorocebus_sabaeus
ENSIPUG00000000210	srp72	89	76.316	ENSCHOG00000013240	SRP72	89	76.316	Choloepus_hoffmanni
ENSIPUG00000000210	srp72	96	77.605	ENSCPBG00000015015	SRP72	99	77.545	Chrysemys_picta_bellii
ENSIPUG00000000210	srp72	96	39.970	ENSCING00000002417	-	95	40.724	Ciona_intestinalis
ENSIPUG00000000210	srp72	97	40.448	ENSCSAVG00000011288	-	96	40.923	Ciona_savignyi
ENSIPUG00000000210	srp72	97	76.190	ENSCANG00000041709	SRP72	99	76.312	Colobus_angolensis_palliatus
ENSIPUG00000000210	srp72	97	53.086	ENSCANG00000037920	-	95	55.031	Colobus_angolensis_palliatus
ENSIPUG00000000210	srp72	99	76.612	ENSCGRG00001013548	Srp72	99	76.612	Cricetulus_griseus_chok1gshd
ENSIPUG00000000210	srp72	95	76.656	ENSCGRG00000003013	Srp72	99	76.656	Cricetulus_griseus_crigri
ENSIPUG00000000210	srp72	98	82.263	ENSCSEG00000003616	srp72	100	82.511	Cynoglossus_semilaevis
ENSIPUG00000000210	srp72	92	83.443	ENSCVAG00000001520	srp72	100	83.443	Cyprinodon_variegatus
ENSIPUG00000000210	srp72	85	85.263	ENSDARG00000014139	srp72	99	85.354	Danio_rerio
ENSIPUG00000000210	srp72	97	72.477	ENSDNOG00000039012	SRP72	83	72.985	Dasypus_novemcinctus
ENSIPUG00000000210	srp72	97	76.434	ENSDORG00000000171	Srp72	99	76.312	Dipodomys_ordii
ENSIPUG00000000210	srp72	95	40.312	FBgn0038810	Srp72	96	40.280	Drosophila_melanogaster
ENSIPUG00000000210	srp72	96	76.983	ENSETEG00000005191	SRP72	100	76.637	Echinops_telfairi
ENSIPUG00000000210	srp72	73	61.382	ENSEBUG00000003696	srp72	97	61.633	Eptatretus_burgeri
ENSIPUG00000000210	srp72	97	76.344	ENSEASG00005017747	SRP72	99	76.462	Equus_asinus_asinus
ENSIPUG00000000210	srp72	98	76.183	ENSECAG00000006920	SRP72	99	76.312	Equus_caballus
ENSIPUG00000000210	srp72	100	82.789	ENSELUG00000022415	srp72	100	82.914	Esox_lucius
ENSIPUG00000000210	srp72	97	76.780	ENSFCAG00000027600	SRP72	100	76.637	Felis_catus
ENSIPUG00000000210	srp72	96	79.595	ENSFALG00000006713	SRP72	99	79.160	Ficedula_albicollis
ENSIPUG00000000210	srp72	98	75.878	ENSFDAG00000002014	-	100	76.006	Fukomys_damarensis
ENSIPUG00000000210	srp72	97	47.833	ENSFDAG00000009793	-	95	48.382	Fukomys_damarensis
ENSIPUG00000000210	srp72	100	81.493	ENSFHEG00000017652	srp72	92	82.388	Fundulus_heteroclitus
ENSIPUG00000000210	srp72	98	78.067	ENSGMOG00000005986	srp72	99	78.261	Gadus_morhua
ENSIPUG00000000210	srp72	96	79.095	ENSGALG00000011403	SRP72	99	78.529	Gallus_gallus
ENSIPUG00000000210	srp72	100	82.985	ENSGAFG00000017762	srp72	100	82.985	Gambusia_affinis
ENSIPUG00000000210	srp72	100	81.343	ENSGACG00000016749	srp72	99	81.940	Gasterosteus_aculeatus
ENSIPUG00000000210	srp72	87	76.672	ENSGAGG00000024611	SRP72	99	77.311	Gopherus_agassizii
ENSIPUG00000000210	srp72	97	76.344	ENSGGOG00000013234	-	99	76.462	Gorilla_gorilla
ENSIPUG00000000210	srp72	100	83.857	ENSHBUG00000020723	srp72	100	83.857	Haplochromis_burtoni
ENSIPUG00000000210	srp72	97	58.833	ENSHGLG00000018597	-	99	59.581	Heterocephalus_glaber_female
ENSIPUG00000000210	srp72	85	69.778	ENSHGLG00000003950	-	97	69.778	Heterocephalus_glaber_female
ENSIPUG00000000210	srp72	97	70.968	ENSHGLG00000005029	-	99	70.615	Heterocephalus_glaber_female
ENSIPUG00000000210	srp72	97	75.883	ENSHGLG00000009791	SRP72	99	76.012	Heterocephalus_glaber_female
ENSIPUG00000000210	srp72	90	68.338	ENSHGLG00000010633	-	99	69.312	Heterocephalus_glaber_female
ENSIPUG00000000210	srp72	50	59.281	ENSHGLG00000003496	-	99	58.501	Heterocephalus_glaber_female
ENSIPUG00000000210	srp72	97	75.883	ENSHGLG00100009021	SRP72	99	76.012	Heterocephalus_glaber_male
ENSIPUG00000000210	srp72	97	57.407	ENSHGLG00100009346	-	99	58.584	Heterocephalus_glaber_male
ENSIPUG00000000210	srp72	85	69.333	ENSHGLG00100017133	-	97	69.333	Heterocephalus_glaber_male
ENSIPUG00000000210	srp72	97	70.968	ENSHGLG00100011236	-	99	70.615	Heterocephalus_glaber_male
ENSIPUG00000000210	srp72	98	82.949	ENSHCOG00000013760	srp72	100	83.183	Hippocampus_comes
ENSIPUG00000000210	srp72	97	76.498	ENSSTOG00000007305	SRP72	99	76.612	Ictidomys_tridecemlineatus
ENSIPUG00000000210	srp72	96	76.983	ENSJJAG00000018324	Srp72	100	76.077	Jaculus_jaculus
ENSIPUG00000000210	srp72	100	81.194	ENSKMAG00000003776	srp72	100	81.194	Kryptolebias_marmoratus
ENSIPUG00000000210	srp72	98	83.282	ENSLOCG00000002628	srp72	98	83.105	Lepisosteus_oculatus
ENSIPUG00000000210	srp72	97	75.730	ENSLAFG00000018307	SRP72	99	75.862	Loxodonta_africana
ENSIPUG00000000210	srp72	98	60.890	ENSMFAG00000037164	-	98	61.409	Macaca_fascicularis
ENSIPUG00000000210	srp72	97	76.190	ENSMFAG00000031065	SRP72	99	76.312	Macaca_fascicularis
ENSIPUG00000000210	srp72	94	56.121	ENSMMUG00000021262	-	95	76.744	Macaca_mulatta
ENSIPUG00000000210	srp72	98	76.147	ENSMMUG00000016368	SRP72	97	76.147	Macaca_mulatta
ENSIPUG00000000210	srp72	97	76.190	ENSMNEG00000038065	-	99	76.312	Macaca_nemestrina
ENSIPUG00000000210	srp72	95	75.791	ENSMLEG00000030140	-	94	75.158	Mandrillus_leucophaeus
ENSIPUG00000000210	srp72	100	83.857	ENSMAMG00000014989	srp72	88	83.857	Mastacembelus_armatus
ENSIPUG00000000210	srp72	100	83.857	ENSMZEG00005003325	srp72	100	83.857	Maylandia_zebra
ENSIPUG00000000210	srp72	93	74.434	ENSMGAG00000008567	SRP72	100	77.730	Meleagris_gallopavo
ENSIPUG00000000210	srp72	99	76.631	ENSMAUG00000001237	Srp72	99	76.347	Mesocricetus_auratus
ENSIPUG00000000210	srp72	95	77.057	ENSMICG00000008507	-	94	77.057	Microcebus_murinus
ENSIPUG00000000210	srp72	99	76.312	ENSMOCG00000020309	Srp72	99	76.312	Microtus_ochrogaster
ENSIPUG00000000210	srp72	100	81.465	ENSMMOG00000002627	srp72	100	81.614	Mola_mola
ENSIPUG00000000210	srp72	96	73.053	ENSMODG00000020697	SRP72	100	72.876	Monodelphis_domestica
ENSIPUG00000000210	srp72	100	83.109	ENSMALG00000003747	srp72	100	83.306	Monopterus_albus
ENSIPUG00000000210	srp72	99	76.162	MGP_CAROLIEiJ_G0027323	Srp72	99	76.162	Mus_caroli
ENSIPUG00000000210	srp72	99	76.162	ENSMUSG00000036323	Srp72	99	76.162	Mus_musculus
ENSIPUG00000000210	srp72	99	76.888	MGP_PahariEiJ_G0017103	Srp72	100	76.374	Mus_pahari
ENSIPUG00000000210	srp72	99	76.162	MGP_SPRETEiJ_G0028317	Srp72	99	76.162	Mus_spretus
ENSIPUG00000000210	srp72	96	76.827	ENSMPUG00000004828	SRP72	100	76.602	Mustela_putorius_furo
ENSIPUG00000000210	srp72	96	76.398	ENSMLUG00000007344	SRP72	100	75.852	Myotis_lucifugus
ENSIPUG00000000210	srp72	100	76.453	ENSNGAG00000012595	Srp72	100	76.453	Nannospalax_galili
ENSIPUG00000000210	srp72	100	79.970	ENSNBRG00000014492	srp72	100	79.970	Neolamprologus_brichardi
ENSIPUG00000000210	srp72	97	71.429	ENSNLEG00000008806	-	99	71.364	Nomascus_leucogenys
ENSIPUG00000000210	srp72	86	74.896	ENSMEUG00000005164	SRP72	90	74.395	Notamacropus_eugenii
ENSIPUG00000000210	srp72	96	76.050	ENSOPRG00000012521	SRP72	99	75.412	Ochotona_princeps
ENSIPUG00000000210	srp72	94	75.475	ENSODEG00000012214	SRP72	100	74.069	Octodon_degus
ENSIPUG00000000210	srp72	100	83.857	ENSONIG00000001446	srp72	99	83.857	Oreochromis_niloticus
ENSIPUG00000000210	srp72	86	73.684	ENSOANG00000008562	SRP72	98	58.910	Ornithorhynchus_anatinus
ENSIPUG00000000210	srp72	97	76.498	ENSOCUG00000012226	SRP72	99	76.162	Oryctolagus_cuniculus
ENSIPUG00000000210	srp72	100	81.409	ENSORLG00000020418	srp72	99	81.409	Oryzias_latipes
ENSIPUG00000000210	srp72	100	80.960	ENSORLG00020009138	srp72	97	80.960	Oryzias_latipes_hni
ENSIPUG00000000210	srp72	100	80.960	ENSORLG00015018251	srp72	99	80.960	Oryzias_latipes_hsok
ENSIPUG00000000210	srp72	98	80.704	ENSOMEG00000022008	srp72	98	81.431	Oryzias_melastigma
ENSIPUG00000000210	srp72	97	77.266	ENSOGAG00000003578	SRP72	99	77.211	Otolemur_garnettii
ENSIPUG00000000210	srp72	97	75.883	ENSOARG00000004329	SRP72	99	76.012	Ovis_aries
ENSIPUG00000000210	srp72	99	54.173	ENSPPAG00000011428	-	95	54.740	Pan_paniscus
ENSIPUG00000000210	srp72	97	76.498	ENSPPAG00000042265	SRP72	99	76.612	Pan_paniscus
ENSIPUG00000000210	srp72	83	59.745	ENSPPAG00000032490	-	95	58.201	Pan_paniscus
ENSIPUG00000000210	srp72	96	76.827	ENSPPRG00000015991	SRP72	100	76.751	Panthera_pardus
ENSIPUG00000000210	srp72	96	76.827	ENSPTIG00000018786	SRP72	100	76.751	Panthera_tigris_altaica
ENSIPUG00000000210	srp72	81	60.448	ENSPTRG00000043609	-	95	58.201	Pan_troglodytes
ENSIPUG00000000210	srp72	97	76.498	ENSPTRG00000048466	-	99	76.612	Pan_troglodytes
ENSIPUG00000000210	srp72	99	56.146	ENSPTRG00000048100	-	95	56.728	Pan_troglodytes
ENSIPUG00000000210	srp72	95	60.472	ENSPANG00000030230	-	98	61.295	Papio_anubis
ENSIPUG00000000210	srp72	97	76.190	ENSPANG00000005495	SRP72	99	76.312	Papio_anubis
ENSIPUG00000000210	srp72	94	77.157	ENSPSIG00000003003	SRP72	100	77.259	Pelodiscus_sinensis
ENSIPUG00000000210	srp72	99	76.631	ENSPEMG00000012828	-	100	75.964	Peromyscus_maniculatus_bairdii
ENSIPUG00000000210	srp72	97	76.198	ENSPCIG00000000732	SRP72	100	75.556	Phascolarctos_cinereus
ENSIPUG00000000210	srp72	100	83.134	ENSPFOG00000003480	srp72	100	83.134	Poecilia_formosa
ENSIPUG00000000210	srp72	100	83.134	ENSPLAG00000020122	srp72	100	83.134	Poecilia_latipinna
ENSIPUG00000000210	srp72	100	82.985	ENSPMEG00000019988	srp72	100	82.985	Poecilia_mexicana
ENSIPUG00000000210	srp72	100	82.985	ENSPREG00000006218	srp72	100	82.985	Poecilia_reticulata
ENSIPUG00000000210	srp72	98	76.336	ENSPPYG00000014752	-	78	76.453	Pongo_abelii
ENSIPUG00000000210	srp72	57	63.089	ENSPPYG00000009152	-	97	61.598	Pongo_abelii
ENSIPUG00000000210	srp72	97	75.422	ENSPVAG00000005590	SRP72	99	75.562	Pteropus_vampyrus
ENSIPUG00000000210	srp72	100	83.857	ENSPNYG00000001916	srp72	100	83.857	Pundamilia_nyererei
ENSIPUG00000000210	srp72	100	92.481	ENSPNAG00000022424	srp72	100	92.481	Pygocentrus_nattereri
ENSIPUG00000000210	srp72	99	74.063	ENSRNOG00000002100	LOC108348180	99	74.663	Rattus_norvegicus
ENSIPUG00000000210	srp72	97	71.429	ENSRBIG00000042069	SRP72	99	71.814	Rhinopithecus_bieti
ENSIPUG00000000210	srp72	99	59.789	ENSRBIG00000029328	-	98	60.862	Rhinopithecus_bieti
ENSIPUG00000000210	srp72	97	76.190	ENSRROG00000035704	SRP72	99	76.312	Rhinopithecus_roxellana
ENSIPUG00000000210	srp72	93	76.206	ENSSHAG00000000614	SRP72	95	76.176	Sarcophilus_harrisii
ENSIPUG00000000210	srp72	100	84.361	ENSSFOG00015002026	srp72	100	84.361	Scleropages_formosus
ENSIPUG00000000210	srp72	100	81.994	ENSSMAG00000007639	srp72	100	82.887	Scophthalmus_maximus
ENSIPUG00000000210	srp72	100	83.558	ENSSDUG00000007345	srp72	98	84.305	Seriola_dumerili
ENSIPUG00000000210	srp72	100	83.707	ENSSLDG00000021819	srp72	98	84.454	Seriola_lalandi_dorsalis
ENSIPUG00000000210	srp72	74	74.211	ENSSARG00000005804	SRP72	76	74.495	Sorex_araneus
ENSIPUG00000000210	srp72	96	77.882	ENSSPUG00000009740	SRP72	97	77.370	Sphenodon_punctatus
ENSIPUG00000000210	srp72	100	83.259	ENSSPAG00000011565	srp72	100	83.857	Stegastes_partitus
ENSIPUG00000000210	srp72	99	74.773	ENSSSCG00000008900	SRP72	100	74.405	Sus_scrofa
ENSIPUG00000000210	srp72	96	79.316	ENSTGUG00000004767	SRP72	99	78.593	Taeniopygia_guttata
ENSIPUG00000000210	srp72	98	81.902	ENSTRUG00000009831	srp72	100	82.159	Takifugu_rubripes
ENSIPUG00000000210	srp72	100	82.362	ENSTNIG00000013073	srp72	99	82.362	Tetraodon_nigroviridis
ENSIPUG00000000210	srp72	97	56.068	ENSTBEG00000007394	SRP72	99	56.522	Tupaia_belangeri
ENSIPUG00000000210	srp72	92	76.052	ENSTTRG00000010945	SRP72	100	76.183	Tursiops_truncatus
ENSIPUG00000000210	srp72	57	76.903	ENSUAMG00000001701	SRP72	100	77.368	Ursus_americanus
ENSIPUG00000000210	srp72	96	76.983	ENSUMAG00000008151	SRP72	100	76.751	Ursus_maritimus
ENSIPUG00000000210	srp72	97	75.115	ENSVPAG00000000458	SRP72	99	75.262	Vicugna_pacos
ENSIPUG00000000210	srp72	97	76.498	ENSVVUG00000006020	SRP72	99	76.612	Vulpes_vulpes
ENSIPUG00000000210	srp72	95	74.097	ENSXETG00000010205	srp72	100	74.097	Xenopus_tropicalis
ENSIPUG00000000210	srp72	100	82.687	ENSXMAG00000018000	srp72	99	82.563	Xiphophorus_maculatus