EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000000283 (Gene tree)
Gene ID: 108265899
Gene Symbol: ercc6l2
Alias: si:ch211-248d20.2
Full Name: ERCC excision repair 6 like 2
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 21063 bases
Position: chr5:18985647-19006709
Accession: 108265899
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000000363	ResIII	PF04851.15	1.7e-08	1	1
ENSIPUP00000000375	ResIII	PF04851.15	1.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000000413	-	3945	-	ENSIPUP00000000375	1314 (aa)	-	-
ENSIPUT00000000401	-	6572	XM_017468733	ENSIPUP00000000363	1283 (aa)	XP_017324222	A0A2D0R0Q4

Gene Model

Click here to download ENSIPUG00000000283's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000000283's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000000283	ercc6l2	87	54.388	ENSATEG00000016700	ercc6l2	99	48.576	Anabas_testudineus
ENSIPUG00000000283	ercc6l2	77	52.913	ENSACLG00000015088	ercc6l2	92	53.800	Astatotilapia_calliptera
ENSIPUG00000000283	ercc6l2	72	54.422	ENSCAFG00000001219	ERCC6L2	97	54.422	Canis_familiaris
ENSIPUG00000000283	ercc6l2	80	68.297	ENSCPOG00000004544	-	90	66.200	Cavia_porcellus
ENSIPUG00000000283	ercc6l2	90	63.239	ENSCPBG00000005414	ERCC6L2	77	63.239	Chrysemys_picta_bellii
ENSIPUG00000000283	ercc6l2	99	61.556	ENSDARG00000012403	ercc6l2	98	61.824	Danio_rerio
ENSIPUG00000000283	ercc6l2	94	69.199	ENSELUG00000002272	ercc6l2	84	68.464	Esox_lucius
ENSIPUG00000000283	ercc6l2	80	50.667	ENSFALG00000003400	ERCC6L2	93	50.667	Ficedula_albicollis
ENSIPUG00000000283	ercc6l2	96	59.353	ENSFHEG00000017890	ercc6l2	86	59.353	Fundulus_heteroclitus
ENSIPUG00000000283	ercc6l2	67	69.016	ENSGMOG00000007751	ercc6l2	83	69.016	Gadus_morhua
ENSIPUG00000000283	ercc6l2	75	66.290	ENSGALG00000012621	ERCC6L2	68	66.611	Gallus_gallus
ENSIPUG00000000283	ercc6l2	85	66.257	ENSGAFG00000012386	ercc6l2	76	66.257	Gambusia_affinis
ENSIPUG00000000283	ercc6l2	82	56.688	ENSGACG00000006992	ercc6l2	96	56.688	Gasterosteus_aculeatus
ENSIPUG00000000283	ercc6l2	82	67.606	ENSGAGG00000021675	ERCC6L2	69	67.606	Gopherus_agassizii
ENSIPUG00000000283	ercc6l2	91	54.156	ENSLBEG00000003016	ercc6l2	83	53.951	Labrus_bergylta
ENSIPUG00000000283	ercc6l2	92	68.232	ENSLACG00000011767	ERCC6L2	81	68.232	Latimeria_chalumnae
ENSIPUG00000000283	ercc6l2	94	64.611	ENSLOCG00000009238	ercc6l2	80	64.611	Lepisosteus_oculatus
ENSIPUG00000000283	ercc6l2	89	60.349	ENSMAUG00000004820	-	88	66.930	Mesocricetus_auratus
ENSIPUG00000000283	ercc6l2	76	66.184	ENSMOCG00000019362	-	91	64.486	Microtus_ochrogaster
ENSIPUG00000000283	ercc6l2	70	64.138	ENSMMOG00000001419	ercc6l2	82	60.864	Mola_mola
ENSIPUG00000000283	ercc6l2	81	63.079	ENSMALG00000016933	ercc6l2	93	55.447	Monopterus_albus
ENSIPUG00000000283	ercc6l2	56	58.783	MGP_PahariEiJ_G0019699	-	90	67.205	Mus_pahari
ENSIPUG00000000283	ercc6l2	55	63.239	ENSMPUG00000006738	ERCC6L2	97	54.060	Mustela_putorius_furo
ENSIPUG00000000283	ercc6l2	80	66.457	ENSOCUG00000000442	-	88	66.238	Oryctolagus_cuniculus
ENSIPUG00000000283	ercc6l2	82	73.021	ENSORLG00000004287	ercc6l2	91	55.533	Oryzias_latipes
ENSIPUG00000000283	ercc6l2	83	68.258	ENSORLG00020002133	ercc6l2	80	73.183	Oryzias_latipes_hni
ENSIPUG00000000283	ercc6l2	58	73.496	ENSORLG00015010250	ercc6l2	91	55.826	Oryzias_latipes_hsok
ENSIPUG00000000283	ercc6l2	91	72.964	ENSOMEG00000021983	ercc6l2	96	49.819	Oryzias_melastigma
ENSIPUG00000000283	ercc6l2	72	54.642	ENSOGAG00000003146	ERCC6L2	97	54.642	Otolemur_garnettii
ENSIPUG00000000283	ercc6l2	78	57.697	ENSOARG00000008546	ERCC6L2	89	57.697	Ovis_aries
ENSIPUG00000000283	ercc6l2	99	51.606	ENSPKIG00000016799	ercc6l2	98	50.260	Paramormyrops_kingsleyae
ENSIPUG00000000283	ercc6l2	81	55.347	ENSPMGG00000016547	ercc6l2	93	55.347	Periophthalmus_magnuspinnatus
ENSIPUG00000000283	ercc6l2	80	66.930	ENSPEMG00000006631	-	87	66.930	Peromyscus_maniculatus_bairdii
ENSIPUG00000000283	ercc6l2	61	63.702	ENSPCIG00000020095	-	67	63.415	Phascolarctos_cinereus
ENSIPUG00000000283	ercc6l2	85	66.575	ENSPFOG00000019333	ercc6l2	74	66.575	Poecilia_formosa
ENSIPUG00000000283	ercc6l2	90	67.260	ENSPREG00000016702	ercc6l2	78	67.260	Poecilia_reticulata
ENSIPUG00000000283	ercc6l2	83	60.081	ENSPPYG00000019412	-	73	60.081	Pongo_abelii
ENSIPUG00000000283	ercc6l2	77	53.890	ENSPNYG00000015347	ercc6l2	95	53.890	Pundamilia_nyererei
ENSIPUG00000000283	ercc6l2	100	69.283	ENSPNAG00000011413	ercc6l2	99	69.432	Pygocentrus_nattereri
ENSIPUG00000000283	ercc6l2	92	57.396	ENSRNOG00000019175	Ercc6l2	78	57.396	Rattus_norvegicus
ENSIPUG00000000283	ercc6l2	92	65.641	ENSSFOG00015006394	ercc6l2	83	65.513	Scleropages_formosus
ENSIPUG00000000283	ercc6l2	84	52.578	ENSSLDG00000018663	ercc6l2	95	54.047	Seriola_lalandi_dorsalis
ENSIPUG00000000283	ercc6l2	90	61.905	ENSSPUG00000004336	ERCC6L2	78	63.462	Sphenodon_punctatus
ENSIPUG00000000283	ercc6l2	71	74.805	ENSSPAG00000004484	ercc6l2	92	53.568	Stegastes_partitus
ENSIPUG00000000283	ercc6l2	68	64.607	ENSTRUG00000014634	ercc6l2	92	53.915	Takifugu_rubripes
ENSIPUG00000000283	ercc6l2	53	63.158	ENSXETG00000014835	ercc6l2	93	50.857	Xenopus_tropicalis
ENSIPUG00000000283	ercc6l2	85	66.027	ENSXMAG00000023695	ercc6l2	76	66.027	Xiphophorus_maculatus