EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000000311 (Gene tree)
Gene ID: 108263269
Gene Symbol: RRP12
Alias: im:7142677|im:7149218|zgc:111822
Full Name: ribosomal RNA processing 12 homolog
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 22757 bases
Position: chr3:17928242-17950998
Accession: 108263269
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000000409	NUC173	PF08161.12	1.4e-68	1	1
ENSIPUP00000000418	NUC173	PF08161.12	5.6e-68	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000000458	-	3663	-	ENSIPUP00000000418	1220 (aa)	-	-
ENSIPUT00000000447	-	5572	XM_017463915	ENSIPUP00000000409	1284 (aa)	XP_017319404	W5U672

Gene Model

Click here to download ENSIPUG00000000311's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000000311's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000000311	RRP12	99	61.231	ENSG00000052749	RRP12	100	76.705	Homo_sapiens
ENSIPUG00000000311	RRP12	98	94.872	ENSAPOG00000013355	rrp12	100	72.446	Acanthochromis_polyacanthus
ENSIPUG00000000311	RRP12	98	63.371	ENSAMEG00000000134	RRP12	99	61.308	Ailuropoda_melanoleuca
ENSIPUG00000000311	RRP12	99	75.526	ENSACIG00000022673	rrp12	100	74.923	Amphilophus_citrinellus
ENSIPUG00000000311	RRP12	98	94.872	ENSAOCG00000016149	rrp12	100	75.019	Amphiprion_ocellaris
ENSIPUG00000000311	RRP12	98	94.872	ENSAPEG00000016023	rrp12	100	73.802	Amphiprion_percula
ENSIPUG00000000311	RRP12	99	74.981	ENSATEG00000022627	rrp12	100	74.478	Anabas_testudineus
ENSIPUG00000000311	RRP12	96	57.450	ENSAPLG00000014387	RRP12	99	57.631	Anas_platyrhynchos
ENSIPUG00000000311	RRP12	99	58.887	ENSACAG00000002175	RRP12	99	58.655	Anolis_carolinensis
ENSIPUG00000000311	RRP12	92	75.658	ENSANAG00000037485	RRP12	99	75.658	Aotus_nancymaae
ENSIPUG00000000311	RRP12	99	74.083	ENSACLG00000007354	rrp12	100	74.091	Astatotilapia_calliptera
ENSIPUG00000000311	RRP12	100	83.152	ENSAMXG00000012852	rrp12	100	83.152	Astyanax_mexicanus
ENSIPUG00000000311	RRP12	97	73.077	ENSBTAG00000002191	RRP12	99	60.876	Bos_taurus
ENSIPUG00000000311	RRP12	85	58.674	ENSCJAG00000016549	-	99	58.530	Callithrix_jacchus
ENSIPUG00000000311	RRP12	99	61.857	ENSCAFG00000009043	RRP12	99	61.550	Canis_familiaris
ENSIPUG00000000311	RRP12	99	61.857	ENSCAFG00020005991	RRP12	99	61.550	Canis_lupus_dingo
ENSIPUG00000000311	RRP12	99	59.067	ENSCHIG00000011876	RRP12	99	58.990	Capra_hircus
ENSIPUG00000000311	RRP12	53	52.594	ENSTSYG00000030210	-	99	52.806	Carlito_syrichta
ENSIPUG00000000311	RRP12	96	55.324	ENSCAPG00000008991	RRP12	98	55.217	Cavia_aperea
ENSIPUG00000000311	RRP12	100	60.880	ENSCPOG00000004215	RRP12	100	60.695	Cavia_porcellus
ENSIPUG00000000311	RRP12	70	55.312	ENSCCAG00000033123	-	82	55.203	Cebus_capucinus
ENSIPUG00000000311	RRP12	80	65.089	ENSCCAG00000024088	RRP12	99	70.968	Cebus_capucinus
ENSIPUG00000000311	RRP12	98	59.036	ENSCATG00000045310	RRP12	99	57.660	Cercocebus_atys
ENSIPUG00000000311	RRP12	100	59.753	ENSCLAG00000003753	RRP12	100	59.830	Chinchilla_lanigera
ENSIPUG00000000311	RRP12	88	59.233	ENSCSAG00000005877	RRP12	99	59.582	Chlorocebus_sabaeus
ENSIPUG00000000311	RRP12	59	69.783	ENSCHOG00000003095	-	60	70.284	Choloepus_hoffmanni
ENSIPUG00000000311	RRP12	94	61.862	ENSCPBG00000011935	RRP12	97	61.678	Chrysemys_picta_bellii
ENSIPUG00000000311	RRP12	63	38.280	ENSCSAVG00000006059	-	100	37.618	Ciona_savignyi
ENSIPUG00000000311	RRP12	92	73.026	ENSCANG00000031653	RRP12	99	75.658	Colobus_angolensis_palliatus
ENSIPUG00000000311	RRP12	91	60.784	ENSCGRG00001004338	Rrp12	99	60.188	Cricetulus_griseus_chok1gshd
ENSIPUG00000000311	RRP12	99	60.571	ENSCGRG00000011965	Rrp12	99	60.031	Cricetulus_griseus_crigri
ENSIPUG00000000311	RRP12	99	73.529	ENSCSEG00000007799	rrp12	99	73.684	Cynoglossus_semilaevis
ENSIPUG00000000311	RRP12	99	75.195	ENSCVAG00000003418	rrp12	100	75.000	Cyprinodon_variegatus
ENSIPUG00000000311	RRP12	100	76.708	ENSDARG00000022410	rrp12	94	86.441	Danio_rerio
ENSIPUG00000000311	RRP12	100	60.462	ENSDNOG00000005120	RRP12	100	60.615	Dasypus_novemcinctus
ENSIPUG00000000311	RRP12	99	60.615	ENSDORG00000009199	Rrp12	99	61.000	Dipodomys_ordii
ENSIPUG00000000311	RRP12	97	55.000	FBgn0030504	CG2691	91	50.000	Drosophila_melanogaster
ENSIPUG00000000311	RRP12	92	61.728	ENSETEG00000002455	RRP12	93	61.728	Echinops_telfairi
ENSIPUG00000000311	RRP12	93	46.835	ENSEBUG00000006555	rrp12	99	47.000	Eptatretus_burgeri
ENSIPUG00000000311	RRP12	98	62.597	ENSEASG00005008693	RRP12	99	60.863	Equus_asinus_asinus
ENSIPUG00000000311	RRP12	94	60.559	ENSECAG00000010892	RRP12	99	60.492	Equus_caballus
ENSIPUG00000000311	RRP12	64	56.765	ENSEEUG00000005447	-	63	56.765	Erinaceus_europaeus
ENSIPUG00000000311	RRP12	99	73.220	ENSELUG00000010510	rrp12	94	84.615	Esox_lucius
ENSIPUG00000000311	RRP12	92	75.658	ENSFCAG00000028639	RRP12	99	61.337	Felis_catus
ENSIPUG00000000311	RRP12	94	60.394	ENSFALG00000008458	RRP12	99	60.559	Ficedula_albicollis
ENSIPUG00000000311	RRP12	99	60.802	ENSFDAG00000019108	RRP12	95	60.802	Fukomys_damarensis
ENSIPUG00000000311	RRP12	99	68.614	ENSFHEG00000004148	rrp12	100	67.747	Fundulus_heteroclitus
ENSIPUG00000000311	RRP12	99	67.581	ENSGMOG00000004188	rrp12	95	68.354	Gadus_morhua
ENSIPUG00000000311	RRP12	99	61.270	ENSGALG00000041331	RRP12	96	61.913	Gallus_gallus
ENSIPUG00000000311	RRP12	99	74.493	ENSGAFG00000009038	rrp12	100	74.381	Gambusia_affinis
ENSIPUG00000000311	RRP12	99	73.266	ENSGACG00000007175	rrp12	100	72.854	Gasterosteus_aculeatus
ENSIPUG00000000311	RRP12	71	65.975	ENSGAGG00000019169	RRP12	96	65.975	Gopherus_agassizii
ENSIPUG00000000311	RRP12	99	61.308	ENSGGOG00000014850	RRP12	99	61.385	Gorilla_gorilla
ENSIPUG00000000311	RRP12	99	74.161	ENSHBUG00000023527	rrp12	93	86.441	Haplochromis_burtoni
ENSIPUG00000000311	RRP12	99	60.802	ENSHGLG00000016772	RRP12	99	60.802	Heterocephalus_glaber_female
ENSIPUG00000000311	RRP12	99	60.802	ENSHGLG00100015110	RRP12	99	60.802	Heterocephalus_glaber_male
ENSIPUG00000000311	RRP12	100	71.839	ENSHCOG00000019519	rrp12	100	71.528	Hippocampus_comes
ENSIPUG00000000311	RRP12	99	61.188	ENSSTOG00000006515	RRP12	99	61.497	Ictidomys_tridecemlineatus
ENSIPUG00000000311	RRP12	96	60.368	ENSJJAG00000000110	Rrp12	99	60.208	Jaculus_jaculus
ENSIPUG00000000311	RRP12	99	74.591	ENSKMAG00000020621	rrp12	100	74.438	Kryptolebias_marmoratus
ENSIPUG00000000311	RRP12	100	71.517	ENSLBEG00000015335	rrp12	100	71.285	Labrus_bergylta
ENSIPUG00000000311	RRP12	72	65.918	ENSLACG00000016633	RRP12	81	65.918	Latimeria_chalumnae
ENSIPUG00000000311	RRP12	100	68.021	ENSLOCG00000003846	rrp12	100	68.021	Lepisosteus_oculatus
ENSIPUG00000000311	RRP12	99	61.674	ENSLAFG00000015965	RRP12	99	61.137	Loxodonta_africana
ENSIPUG00000000311	RRP12	92	72.368	ENSMFAG00000041558	RRP12	99	75.000	Macaca_fascicularis
ENSIPUG00000000311	RRP12	92	72.368	ENSMMUG00000019634	RRP12	99	75.000	Macaca_mulatta
ENSIPUG00000000311	RRP12	92	72.368	ENSMNEG00000036759	RRP12	99	75.000	Macaca_nemestrina
ENSIPUG00000000311	RRP12	92	71.053	ENSMLEG00000041317	RRP12	99	76.316	Mandrillus_leucophaeus
ENSIPUG00000000311	RRP12	99	74.092	ENSMAMG00000002964	rrp12	100	75.371	Mastacembelus_armatus
ENSIPUG00000000311	RRP12	98	94.872	ENSMZEG00005003241	rrp12	94	86.441	Maylandia_zebra
ENSIPUG00000000311	RRP12	99	59.570	ENSMGAG00000009829	RRP12	99	59.570	Meleagris_gallopavo
ENSIPUG00000000311	RRP12	99	59.009	ENSMAUG00000020743	Rrp12	99	59.009	Mesocricetus_auratus
ENSIPUG00000000311	RRP12	92	77.124	ENSMICG00000007624	RRP12	99	61.201	Microcebus_murinus
ENSIPUG00000000311	RRP12	100	61.248	ENSMOCG00000006753	Rrp12	100	60.786	Microtus_ochrogaster
ENSIPUG00000000311	RRP12	100	72.741	ENSMMOG00000010708	rrp12	100	71.947	Mola_mola
ENSIPUG00000000311	RRP12	99	61.960	ENSMODG00000004315	RRP12	99	61.622	Monodelphis_domestica
ENSIPUG00000000311	RRP12	99	69.697	ENSMALG00000016560	rrp12	97	73.461	Monopterus_albus
ENSIPUG00000000311	RRP12	99	62.468	MGP_CAROLIEiJ_G0022957	Rrp12	99	60.199	Mus_caroli
ENSIPUG00000000311	RRP12	99	61.141	ENSMUSG00000035049	Rrp12	99	60.756	Mus_musculus
ENSIPUG00000000311	RRP12	100	61.248	MGP_PahariEiJ_G0014447	Rrp12	100	60.756	Mus_pahari
ENSIPUG00000000311	RRP12	99	61.218	MGP_SPRETEiJ_G0023878	Rrp12	99	60.910	Mus_spretus
ENSIPUG00000000311	RRP12	99	61.107	ENSMPUG00000017046	RRP12	99	60.508	Mustela_putorius_furo
ENSIPUG00000000311	RRP12	99	61.937	ENSMLUG00000017160	RRP12	99	60.996	Myotis_lucifugus
ENSIPUG00000000311	RRP12	99	61.604	ENSNGAG00000024144	Rrp12	99	61.586	Nannospalax_galili
ENSIPUG00000000311	RRP12	99	73.125	ENSNBRG00000009987	rrp12	100	72.910	Neolamprologus_brichardi
ENSIPUG00000000311	RRP12	92	75.000	ENSNLEG00000013762	RRP12	99	75.000	Nomascus_leucogenys
ENSIPUG00000000311	RRP12	100	55.814	ENSMEUG00000003185	RRP12	100	55.814	Notamacropus_eugenii
ENSIPUG00000000311	RRP12	94	65.943	ENSOPRG00000005001	RRP12	94	65.943	Ochotona_princeps
ENSIPUG00000000311	RRP12	100	60.278	ENSODEG00000016439	RRP12	100	59.892	Octodon_degus
ENSIPUG00000000311	RRP12	99	74.707	ENSONIG00000009528	rrp12	100	74.478	Oreochromis_niloticus
ENSIPUG00000000311	RRP12	100	57.373	ENSOANG00000006560	RRP12	100	57.220	Ornithorhynchus_anatinus
ENSIPUG00000000311	RRP12	98	63.354	ENSOCUG00000005662	RRP12	99	61.527	Oryctolagus_cuniculus
ENSIPUG00000000311	RRP12	99	73.500	ENSORLG00000008688	rrp12	99	72.636	Oryzias_latipes
ENSIPUG00000000311	RRP12	97	73.651	ENSORLG00020002355	rrp12	99	72.973	Oryzias_latipes_hni
ENSIPUG00000000311	RRP12	99	73.733	ENSORLG00015006709	rrp12	99	73.023	Oryzias_latipes_hsok
ENSIPUG00000000311	RRP12	97	73.529	ENSOMEG00000002609	rrp12	99	72.893	Oryzias_melastigma
ENSIPUG00000000311	RRP12	99	60.138	ENSOGAG00000001626	RRP12	99	60.215	Otolemur_garnettii
ENSIPUG00000000311	RRP12	99	60.184	ENSOARG00000009681	RRP12	99	60.015	Ovis_aries
ENSIPUG00000000311	RRP12	99	59.199	ENSPPAG00000043885	RRP12	99	58.824	Pan_paniscus
ENSIPUG00000000311	RRP12	92	76.316	ENSPPRG00000002029	RRP12	99	61.337	Panthera_pardus
ENSIPUG00000000311	RRP12	92	75.658	ENSPTIG00000004428	RRP12	99	57.417	Panthera_tigris_altaica
ENSIPUG00000000311	RRP12	99	59.199	ENSPTRG00000002806	RRP12	99	58.900	Pan_troglodytes
ENSIPUG00000000311	RRP12	92	71.053	ENSPANG00000021360	RRP12	99	76.316	Papio_anubis
ENSIPUG00000000311	RRP12	100	72.222	ENSPKIG00000016516	rrp12	99	72.145	Paramormyrops_kingsleyae
ENSIPUG00000000311	RRP12	99	72.699	ENSPMGG00000020217	rrp12	100	72.214	Periophthalmus_magnuspinnatus
ENSIPUG00000000311	RRP12	100	61.586	ENSPEMG00000008437	Rrp12	99	61.047	Peromyscus_maniculatus_bairdii
ENSIPUG00000000311	RRP12	98	64.912	ENSPMAG00000007493	rrp12	96	64.912	Petromyzon_marinus
ENSIPUG00000000311	RRP12	99	61.408	ENSPCIG00000002157	RRP12	100	61.068	Phascolarctos_cinereus
ENSIPUG00000000311	RRP12	99	74.337	ENSPFOG00000014975	rrp12	100	74.226	Poecilia_formosa
ENSIPUG00000000311	RRP12	99	74.337	ENSPLAG00000009840	rrp12	100	74.226	Poecilia_latipinna
ENSIPUG00000000311	RRP12	99	74.493	ENSPMEG00000021871	rrp12	100	74.381	Poecilia_mexicana
ENSIPUG00000000311	RRP12	99	72.162	ENSPREG00000020950	rrp12	100	72.145	Poecilia_reticulata
ENSIPUG00000000311	RRP12	99	60.154	ENSPPYG00000002528	RRP12	99	60.385	Pongo_abelii
ENSIPUG00000000311	RRP12	94	77.401	ENSPCAG00000008967	RRP12	94	77.401	Procavia_capensis
ENSIPUG00000000311	RRP12	98	69.540	ENSPCOG00000014009	RRP12	99	61.467	Propithecus_coquereli
ENSIPUG00000000311	RRP12	99	58.475	ENSPVAG00000003370	RRP12	100	58.243	Pteropus_vampyrus
ENSIPUG00000000311	RRP12	99	74.473	ENSPNYG00000009451	rrp12	100	74.478	Pundamilia_nyererei
ENSIPUG00000000311	RRP12	100	83.294	ENSPNAG00000007658	rrp12	100	83.061	Pygocentrus_nattereri
ENSIPUG00000000311	RRP12	99	61.343	ENSRNOG00000048495	Rrp12	99	61.034	Rattus_norvegicus
ENSIPUG00000000311	RRP12	92	73.026	ENSRBIG00000021296	RRP12	99	75.658	Rhinopithecus_bieti
ENSIPUG00000000311	RRP12	92	73.026	ENSRROG00000032482	RRP12	99	75.658	Rhinopithecus_roxellana
ENSIPUG00000000311	RRP12	92	75.000	ENSSBOG00000030992	RRP12	100	75.000	Saimiri_boliviensis_boliviensis
ENSIPUG00000000311	RRP12	99	61.408	ENSSHAG00000018275	RRP12	99	61.021	Sarcophilus_harrisii
ENSIPUG00000000311	RRP12	99	74.359	ENSSFOG00015016400	rrp12	99	73.815	Scleropages_formosus
ENSIPUG00000000311	RRP12	97	94.872	ENSSMAG00000004047	rrp12	100	74.593	Scophthalmus_maximus
ENSIPUG00000000311	RRP12	99	75.838	ENSSDUG00000022871	rrp12	100	75.600	Seriola_dumerili
ENSIPUG00000000311	RRP12	99	75.838	ENSSLDG00000003038	rrp12	100	75.678	Seriola_lalandi_dorsalis
ENSIPUG00000000311	RRP12	100	60.046	ENSSPUG00000012221	RRP12	100	61.017	Sphenodon_punctatus
ENSIPUG00000000311	RRP12	99	75.136	ENSSPAG00000002261	rrp12	100	75.406	Stegastes_partitus
ENSIPUG00000000311	RRP12	100	61.017	ENSSSCG00000010514	RRP12	100	60.709	Sus_scrofa
ENSIPUG00000000311	RRP12	89	57.380	ENSTGUG00000009711	RRP12	100	57.118	Taeniopygia_guttata
ENSIPUG00000000311	RRP12	100	69.070	ENSTRUG00000012017	rrp12	100	68.450	Takifugu_rubripes
ENSIPUG00000000311	RRP12	100	72.657	ENSTNIG00000016522	rrp12	100	72.481	Tetraodon_nigroviridis
ENSIPUG00000000311	RRP12	77	77.451	ENSTBEG00000004907	RRP12	80	77.451	Tupaia_belangeri
ENSIPUG00000000311	RRP12	100	58.860	ENSTTRG00000009878	RRP12	100	58.615	Tursiops_truncatus
ENSIPUG00000000311	RRP12	98	63.582	ENSUAMG00000009092	RRP12	99	61.444	Ursus_americanus
ENSIPUG00000000311	RRP12	99	60.077	ENSUMAG00000021621	RRP12	99	59.861	Ursus_maritimus
ENSIPUG00000000311	RRP12	99	62.122	ENSVVUG00000023168	RRP12	99	61.890	Vulpes_vulpes
ENSIPUG00000000311	RRP12	99	63.700	ENSXETG00000003430	rrp12	99	63.333	Xenopus_tropicalis
ENSIPUG00000000311	RRP12	98	73.234	ENSXCOG00000012082	rrp12	99	73.317	Xiphophorus_couchianus
ENSIPUG00000000311	RRP12	99	74.571	ENSXMAG00000013498	rrp12	100	74.381	Xiphophorus_maculatus