EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSIPUG00000000352 (Gene tree)
Gene ID: 108265419
Gene Symbol: APEX2
Alias: zgc:55889
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 2
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 3277 bases
Position: chr5:19313569-19316845
Accession: 108265419
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000000454	Exo_endo_phos	PF03372.23	3.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000000495	-	1752	XM_017467704	ENSIPUP00000000454	583 (aa)	XP_017323193	W5UIJ6

Gene Model

Click here to download ENSIPUG00000000352's gene model file

Pathways

Pathway ID	Pathway Name	Source
ipu03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000000352's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000000352	APEX2	99	43.697	ENSG00000169188	APEX2	99	43.529	Homo_sapiens
ENSIPUG00000000352	APEX2	100	61.263	ENSAPOG00000005805	apex2	100	61.945	Acanthochromis_polyacanthus
ENSIPUG00000000352	APEX2	99	43.189	ENSAMEG00000003608	APEX2	84	52.893	Ailuropoda_melanoleuca
ENSIPUG00000000352	APEX2	100	60.751	ENSACIG00000010000	apex2	100	60.204	Amphilophus_citrinellus
ENSIPUG00000000352	APEX2	100	61.224	ENSAOCG00000021774	apex2	100	62.075	Amphiprion_ocellaris
ENSIPUG00000000352	APEX2	100	60.884	ENSAPEG00000020890	apex2	94	61.735	Amphiprion_percula
ENSIPUG00000000352	APEX2	100	61.421	ENSATEG00000023600	apex2	100	61.421	Anabas_testudineus
ENSIPUG00000000352	APEX2	99	46.246	ENSACAG00000011201	APEX2	99	46.587	Anolis_carolinensis
ENSIPUG00000000352	APEX2	99	44.221	ENSANAG00000021907	-	99	44.221	Aotus_nancymaae
ENSIPUG00000000352	APEX2	97	40.444	ENSANAG00000020845	-	99	39.932	Aotus_nancymaae
ENSIPUG00000000352	APEX2	100	69.309	ENSAMXG00000007422	apex2	100	69.646	Astyanax_mexicanus
ENSIPUG00000000352	APEX2	99	44.799	ENSBTAG00000013177	APEX2	99	44.295	Bos_taurus
ENSIPUG00000000352	APEX2	99	44.054	ENSCJAG00000016584	APEX2	99	44.054	Callithrix_jacchus
ENSIPUG00000000352	APEX2	99	42.714	ENSCAFG00000014310	APEX2	78	63.333	Canis_familiaris
ENSIPUG00000000352	APEX2	99	43.551	ENSCAFG00020013818	APEX2	93	55.947	Canis_lupus_dingo
ENSIPUG00000000352	APEX2	99	43.624	ENSCHIG00000019916	APEX2	99	43.960	Capra_hircus
ENSIPUG00000000352	APEX2	99	44.538	ENSTSYG00000005612	APEX2	99	43.866	Carlito_syrichta
ENSIPUG00000000352	APEX2	75	52.500	ENSCPOG00000007265	APEX2	91	52.793	Cavia_porcellus
ENSIPUG00000000352	APEX2	86	50.737	ENSCCAG00000025405	-	96	50.737	Cebus_capucinus
ENSIPUG00000000352	APEX2	99	43.529	ENSCATG00000044854	APEX2	99	43.361	Cercocebus_atys
ENSIPUG00000000352	APEX2	99	44.426	ENSCLAG00000017315	APEX2	78	67.213	Chinchilla_lanigera
ENSIPUG00000000352	APEX2	99	43.361	ENSCSAG00000012124	APEX2	99	43.193	Chlorocebus_sabaeus
ENSIPUG00000000352	APEX2	70	61.290	ENSCPBG00000016631	APEX2	82	61.290	Chrysemys_picta_bellii
ENSIPUG00000000352	APEX2	73	50.975	ENSCSAVG00000006052	-	91	50.975	Ciona_savignyi
ENSIPUG00000000352	APEX2	99	43.697	ENSCANG00000003053	APEX2	99	43.529	Colobus_angolensis_palliatus
ENSIPUG00000000352	APEX2	99	44.332	ENSCGRG00001008132	Apex2	99	42.664	Cricetulus_griseus_chok1gshd
ENSIPUG00000000352	APEX2	99	44.332	ENSCGRG00000009667	Apex2	89	58.636	Cricetulus_griseus_crigri
ENSIPUG00000000352	APEX2	100	59.122	ENSCSEG00000019900	apex2	99	59.022	Cynoglossus_semilaevis
ENSIPUG00000000352	APEX2	100	60.202	ENSCVAG00000021583	apex2	100	61.735	Cyprinodon_variegatus
ENSIPUG00000000352	APEX2	100	63.452	ENSDARG00000008472	apex2	100	63.497	Danio_rerio
ENSIPUG00000000352	APEX2	99	44.162	ENSDNOG00000038901	APEX2	78	68.333	Dasypus_novemcinctus
ENSIPUG00000000352	APEX2	79	54.986	ENSEBUG00000015654	apex2	95	54.986	Eptatretus_burgeri
ENSIPUG00000000352	APEX2	99	45.194	ENSEASG00005011694	APEX2	90	44.332	Equus_asinus_asinus
ENSIPUG00000000352	APEX2	99	45.194	ENSECAG00000026921	APEX2	90	44.332	Equus_caballus
ENSIPUG00000000352	APEX2	99	43.676	ENSEEUG00000013172	APEX2	79	71.667	Erinaceus_europaeus
ENSIPUG00000000352	APEX2	100	58.541	ENSELUG00000021417	apex2	99	58.541	Esox_lucius
ENSIPUG00000000352	APEX2	99	44.370	ENSFCAG00000021990	APEX2	99	44.034	Felis_catus
ENSIPUG00000000352	APEX2	99	43.025	ENSFDAG00000008076	APEX2	90	57.674	Fukomys_damarensis
ENSIPUG00000000352	APEX2	100	55.442	ENSFHEG00000021411	apex2	99	55.743	Fundulus_heteroclitus
ENSIPUG00000000352	APEX2	70	69.192	ENSGMOG00000019681	apex2	81	69.192	Gadus_morhua
ENSIPUG00000000352	APEX2	100	59.796	ENSGAFG00000005829	apex2	100	60.136	Gambusia_affinis
ENSIPUG00000000352	APEX2	66	82.184	ENSGACG00000012307	apex2	66	82.184	Gasterosteus_aculeatus
ENSIPUG00000000352	APEX2	90	43.315	ENSGAGG00000011520	APEX2	87	43.762	Gopherus_agassizii
ENSIPUG00000000352	APEX2	99	43.697	ENSGGOG00000002056	APEX2	99	43.529	Gorilla_gorilla
ENSIPUG00000000352	APEX2	100	60.034	ENSHBUG00000009938	apex2	100	60.374	Haplochromis_burtoni
ENSIPUG00000000352	APEX2	99	44.013	ENSHGLG00000000273	APEX2	99	54.661	Heterocephalus_glaber_female
ENSIPUG00000000352	APEX2	100	56.775	ENSHCOG00000010165	apex2	100	56.775	Hippocampus_comes
ENSIPUG00000000352	APEX2	99	44.874	ENSSTOG00000025121	APEX2	85	60.190	Ictidomys_tridecemlineatus
ENSIPUG00000000352	APEX2	99	45.516	ENSJJAG00000019611	Apex2	93	59.908	Jaculus_jaculus
ENSIPUG00000000352	APEX2	100	60.477	ENSKMAG00000006985	apex2	100	60.477	Kryptolebias_marmoratus
ENSIPUG00000000352	APEX2	100	60.544	ENSLBEG00000012139	apex2	100	60.544	Labrus_bergylta
ENSIPUG00000000352	APEX2	100	48.649	ENSLACG00000000865	APEX2	100	48.653	Latimeria_chalumnae
ENSIPUG00000000352	APEX2	99	58.475	ENSLOCG00000014467	apex2	99	59.153	Lepisosteus_oculatus
ENSIPUG00000000352	APEX2	99	44.128	ENSLAFG00000018312	APEX2	99	43.529	Loxodonta_africana
ENSIPUG00000000352	APEX2	99	43.866	ENSMFAG00000002486	APEX2	99	43.697	Macaca_fascicularis
ENSIPUG00000000352	APEX2	99	43.697	ENSMMUG00000008428	APEX2	99	43.529	Macaca_mulatta
ENSIPUG00000000352	APEX2	99	43.697	ENSMNEG00000036783	APEX2	99	43.529	Macaca_nemestrina
ENSIPUG00000000352	APEX2	99	43.529	ENSMLEG00000028208	APEX2	99	43.361	Mandrillus_leucophaeus
ENSIPUG00000000352	APEX2	100	60.570	ENSMAMG00000024220	apex2	100	60.637	Mastacembelus_armatus
ENSIPUG00000000352	APEX2	100	60.034	ENSMZEG00005026322	apex2	100	60.374	Maylandia_zebra
ENSIPUG00000000352	APEX2	99	42.244	ENSMICG00000043181	APEX2	99	41.930	Microcebus_murinus
ENSIPUG00000000352	APEX2	99	43.051	ENSMOCG00000004339	Apex2	91	57.534	Microtus_ochrogaster
ENSIPUG00000000352	APEX2	100	60.708	ENSMMOG00000017340	apex2	100	60.708	Mola_mola
ENSIPUG00000000352	APEX2	84	70.492	ENSMODG00000005341	APEX2	82	67.188	Monodelphis_domestica
ENSIPUG00000000352	APEX2	100	58.853	ENSMALG00000014179	apex2	100	59.160	Monopterus_albus
ENSIPUG00000000352	APEX2	99	43.729	MGP_CAROLIEiJ_G0033484	Apex2	100	52.878	Mus_caroli
ENSIPUG00000000352	APEX2	99	44.501	ENSMUSG00000025269	Apex2	99	52.158	Mus_musculus
ENSIPUG00000000352	APEX2	99	45.085	MGP_PahariEiJ_G0032023	Apex2	100	52.518	Mus_pahari
ENSIPUG00000000352	APEX2	99	44.670	MGP_SPRETEiJ_G0034654	Apex2	100	52.878	Mus_spretus
ENSIPUG00000000352	APEX2	99	43.854	ENSMPUG00000003293	APEX2	79	66.667	Mustela_putorius_furo
ENSIPUG00000000352	APEX2	99	43.707	ENSMLUG00000004562	-	92	58.333	Myotis_lucifugus
ENSIPUG00000000352	APEX2	99	44.426	ENSMLUG00000016298	-	99	43.750	Myotis_lucifugus
ENSIPUG00000000352	APEX2	99	42.450	ENSNGAG00000013576	Apex2	99	43.456	Nannospalax_galili
ENSIPUG00000000352	APEX2	100	59.022	ENSNBRG00000010099	apex2	100	59.524	Neolamprologus_brichardi
ENSIPUG00000000352	APEX2	54	65.000	ENSNLEG00000032067	-	75	65.000	Nomascus_leucogenys
ENSIPUG00000000352	APEX2	100	60.922	ENSONIG00000016881	apex2	100	61.499	Oreochromis_niloticus
ENSIPUG00000000352	APEX2	93	50.275	ENSOANG00000000689	-	96	49.725	Ornithorhynchus_anatinus
ENSIPUG00000000352	APEX2	99	37.856	ENSOCUG00000000570	APEX2	99	37.521	Oryctolagus_cuniculus
ENSIPUG00000000352	APEX2	100	58.744	ENSORLG00000014053	apex2	100	59.589	Oryzias_latipes
ENSIPUG00000000352	APEX2	100	58.404	ENSORLG00020013253	apex2	100	58.291	Oryzias_latipes_hni
ENSIPUG00000000352	APEX2	100	58.404	ENSORLG00015007515	apex2	100	59.247	Oryzias_latipes_hsok
ENSIPUG00000000352	APEX2	100	59.044	ENSOMEG00000003655	apex2	100	59.044	Oryzias_melastigma
ENSIPUG00000000352	APEX2	70	65.000	ENSOGAG00000007797	APEX2	78	65.000	Otolemur_garnettii
ENSIPUG00000000352	APEX2	99	43.624	ENSOARG00000005742	APEX2	99	43.960	Ovis_aries
ENSIPUG00000000352	APEX2	99	44.034	ENSPPAG00000035747	APEX2	99	43.866	Pan_paniscus
ENSIPUG00000000352	APEX2	99	44.221	ENSPPRG00000002440	APEX2	79	66.667	Panthera_pardus
ENSIPUG00000000352	APEX2	99	43.886	ENSPTIG00000021651	APEX2	79	66.667	Panthera_tigris_altaica
ENSIPUG00000000352	APEX2	99	44.034	ENSPTRG00000021946	APEX2	99	43.866	Pan_troglodytes
ENSIPUG00000000352	APEX2	99	43.529	ENSPANG00000003595	APEX2	99	43.361	Papio_anubis
ENSIPUG00000000352	APEX2	100	60.272	ENSPKIG00000007752	apex2	100	60.847	Paramormyrops_kingsleyae
ENSIPUG00000000352	APEX2	100	59.797	ENSPMGG00000009151	apex2	100	59.359	Periophthalmus_magnuspinnatus
ENSIPUG00000000352	APEX2	99	44.068	ENSPEMG00000016475	Apex2	89	57.273	Peromyscus_maniculatus_bairdii
ENSIPUG00000000352	APEX2	70	70.492	ENSPCIG00000007633	APEX2	81	67.188	Phascolarctos_cinereus
ENSIPUG00000000352	APEX2	100	60.544	ENSPFOG00000000408	apex2	100	60.884	Poecilia_formosa
ENSIPUG00000000352	APEX2	100	60.544	ENSPLAG00000023814	apex2	100	60.884	Poecilia_latipinna
ENSIPUG00000000352	APEX2	100	60.544	ENSPMEG00000023222	apex2	100	60.884	Poecilia_mexicana
ENSIPUG00000000352	APEX2	99	44.034	ENSPPYG00000020388	APEX2	99	43.866	Pongo_abelii
ENSIPUG00000000352	APEX2	99	43.529	ENSPCOG00000016083	APEX2	99	42.833	Propithecus_coquereli
ENSIPUG00000000352	APEX2	92	43.646	ENSPVAG00000007851	APEX2	82	55.016	Pteropus_vampyrus
ENSIPUG00000000352	APEX2	100	59.865	ENSPNYG00000015698	apex2	100	60.204	Pundamilia_nyererei
ENSIPUG00000000352	APEX2	100	70.270	ENSPNAG00000011666	apex2	100	70.101	Pygocentrus_nattereri
ENSIPUG00000000352	APEX2	99	43.898	ENSRNOG00000000166	Apex2	99	43.390	Rattus_norvegicus
ENSIPUG00000000352	APEX2	99	43.866	ENSRBIG00000036500	APEX2	99	43.697	Rhinopithecus_bieti
ENSIPUG00000000352	APEX2	99	43.697	ENSRROG00000032674	APEX2	99	43.529	Rhinopithecus_roxellana
ENSIPUG00000000352	APEX2	69	36.585	YBL019W	APN2	91	31.034	Saccharomyces_cerevisiae
ENSIPUG00000000352	APEX2	99	44.389	ENSSBOG00000030500	-	99	44.556	Saimiri_boliviensis_boliviensis
ENSIPUG00000000352	APEX2	96	37.279	ENSSBOG00000003489	-	96	37.102	Saimiri_boliviensis_boliviensis
ENSIPUG00000000352	APEX2	70	67.188	ENSSHAG00000007846	APEX2	82	67.188	Sarcophilus_harrisii
ENSIPUG00000000352	APEX2	84	83.077	ENSSFOG00015010354	apex2	94	83.077	Scleropages_formosus
ENSIPUG00000000352	APEX2	100	59.899	ENSSMAG00000012753	apex2	100	60.302	Scophthalmus_maximus
ENSIPUG00000000352	APEX2	100	61.421	ENSSDUG00000022892	apex2	100	61.591	Seriola_dumerili
ENSIPUG00000000352	APEX2	100	60.434	ENSSLDG00000024347	apex2	100	60.927	Seriola_lalandi_dorsalis
ENSIPUG00000000352	APEX2	99	43.624	ENSSARG00000010297	APEX2	78	66.667	Sorex_araneus
ENSIPUG00000000352	APEX2	100	60.580	ENSSPAG00000016279	apex2	100	60.781	Stegastes_partitus
ENSIPUG00000000352	APEX2	99	44.874	ENSSSCG00000012348	-	99	44.538	Sus_scrofa
ENSIPUG00000000352	APEX2	100	60.477	ENSTRUG00000015660	apex2	100	59.797	Takifugu_rubripes
ENSIPUG00000000352	APEX2	64	76.056	ENSTNIG00000003725	apex2	92	78.082	Tetraodon_nigroviridis
ENSIPUG00000000352	APEX2	92	42.308	ENSTBEG00000010520	APEX2	76	70.000	Tupaia_belangeri
ENSIPUG00000000352	APEX2	99	44.093	ENSUAMG00000004720	APEX2	93	56.388	Ursus_americanus
ENSIPUG00000000352	APEX2	75	50.000	ENSUMAG00000002892	APEX2	99	41.137	Ursus_maritimus
ENSIPUG00000000352	APEX2	99	43.719	ENSVVUG00000005989	APEX2	78	63.333	Vulpes_vulpes
ENSIPUG00000000352	APEX2	99	49.400	ENSXETG00000022026	apex2	99	49.147	Xenopus_tropicalis
ENSIPUG00000000352	APEX2	100	60.307	ENSXMAG00000025740	apex2	100	60.136	Xiphophorus_maculatus