EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSIPUG00000000355 (Gene tree)
Gene ID
108265541
Gene Symbol
csde1
Alias
fa92c07|si:ch211-261n11.2|wu:fa92c07|wu:fa97c10|wu:fb53f07|wu:fb78d03
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Ictalurus_punctatus
Status
putative
Strand
Minus strand
Length
14499 bases
Position
chr5:19334473-19348971
Accession
108265541
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSIPUP00000000460CSDPF00313.222.6e-8215
ENSIPUP00000000460CSDPF00313.222.6e-8225
ENSIPUP00000000460CSDPF00313.222.6e-8235
ENSIPUP00000000460CSDPF00313.222.6e-8245
ENSIPUP00000000460CSDPF00313.222.6e-8255
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSIPUT00000000502-2304XM_017467981ENSIPUP00000000460767 (aa)XP_017323470-
Gene Model
Click here to download ENSIPUG00000000355's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000000355's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSIPUG00000000355csde110076.913ENSG00000009307CSDE110083.824Homo_sapiens
ENSIPUG00000000355csde110086.122ENSAPOG00000015538csde110086.122Acanthochromis_polyacanthus
ENSIPUG00000000355csde110076.135ENSAMEG00000017129CSDE19476.135Ailuropoda_melanoleuca
ENSIPUG00000000355csde18783.871ENSACIG00000015175csde110083.871Amphilophus_citrinellus
ENSIPUG00000000355csde110086.381ENSAOCG00000011510csde110086.381Amphiprion_ocellaris
ENSIPUG00000000355csde110086.381ENSAPEG00000007194csde110086.381Amphiprion_percula
ENSIPUG00000000355csde110084.955ENSATEG00000003864csde110084.955Anabas_testudineus
ENSIPUG00000000355csde110077.951ENSAPLG00000008797CSDE110077.951Anas_platyrhynchos
ENSIPUG00000000355csde110075.187ENSACAG00000003120CSDE110075.187Anolis_carolinensis
ENSIPUG00000000355csde110076.783ENSANAG00000024665CSDE19975.081Aotus_nancymaae
ENSIPUG00000000355csde19161.484ENSANAG00000028396-9361.484Aotus_nancymaae
ENSIPUG00000000355csde110083.917ENSACLG00000013296csde110084.565Astatotilapia_calliptera
ENSIPUG00000000355csde110089.309ENSAMXG00000007436csde110089.309Astyanax_mexicanus
ENSIPUG00000000355csde110076.524ENSBTAG00000000678CSDE110076.524Bos_taurus
ENSIPUG00000000355csde110076.783ENSCJAG00000012565CSDE19476.783Callithrix_jacchus
ENSIPUG00000000355csde19877.219ENSCAFG00000009618CSDE19477.219Canis_familiaris
ENSIPUG00000000355csde110077.043ENSCAFG00020000481CSDE110077.043Canis_lupus_dingo
ENSIPUG00000000355csde110076.524ENSCHIG00000017250CSDE110076.524Capra_hircus
ENSIPUG00000000355csde110077.173ENSTSYG00000003747CSDE110077.173Carlito_syrichta
ENSIPUG00000000355csde110054.239ENSCAPG00000015128CSDE110054.239Cavia_aperea
ENSIPUG00000000355csde110071.879ENSCPOG00000040388CSDE110071.879Cavia_porcellus
ENSIPUG00000000355csde110076.783ENSCCAG00000036794CSDE19975.081Cebus_capucinus
ENSIPUG00000000355csde19556.974ENSCCAG00000033677-9956.974Cebus_capucinus
ENSIPUG00000000355csde19756.098ENSCCAG00000030878-9156.098Cebus_capucinus
ENSIPUG00000000355csde110076.913ENSCATG00000036962CSDE19776.913Cercocebus_atys
ENSIPUG00000000355csde110077.173ENSCLAG00000006618CSDE110077.173Chinchilla_lanigera
ENSIPUG00000000355csde110073.940ENSCSAG00000001658CSDE19573.940Chlorocebus_sabaeus
ENSIPUG00000000355csde110074.034ENSCHOG00000000918CSDE18974.034Choloepus_hoffmanni
ENSIPUG00000000355csde110077.432ENSCPBG00000016547CSDE110077.432Chrysemys_picta_bellii
ENSIPUG00000000355csde19743.171ENSCING00000014465-9643.171Ciona_intestinalis
ENSIPUG00000000355csde19742.894ENSCSAVG00000008100-9941.990Ciona_savignyi
ENSIPUG00000000355csde110076.913ENSCANG00000035096CSDE19776.913Colobus_angolensis_palliatus
ENSIPUG00000000355csde18779.336ENSCANG00000031069-9479.336Colobus_angolensis_palliatus
ENSIPUG00000000355csde110076.135ENSCGRG00001016833-10076.135Cricetulus_griseus_chok1gshd
ENSIPUG00000000355csde110062.646ENSCGRG00001014011-10062.646Cricetulus_griseus_chok1gshd
ENSIPUG00000000355csde19773.171ENSCGRG00000002225-10073.171Cricetulus_griseus_crigri
ENSIPUG00000000355csde110070.870ENSCGRG00000005831-10070.870Cricetulus_griseus_crigri
ENSIPUG00000000355csde110083.917ENSCSEG00000002620csde110083.917Cynoglossus_semilaevis
ENSIPUG00000000355csde110084.565ENSCVAG00000001344csde110084.565Cyprinodon_variegatus
ENSIPUG00000000355csde110083.104ENSDARG00000074758csde110085.714Danio_rerio
ENSIPUG00000000355csde16349.813ENSDNOG00000034464-9949.813Dasypus_novemcinctus
ENSIPUG00000000355csde110077.073ENSDNOG00000010287-9377.073Dasypus_novemcinctus
ENSIPUG00000000355csde110073.317ENSDORG00000011609Csde110076.042Dipodomys_ordii
ENSIPUG00000000355csde19747.551FBgn0263352Unr8447.358Drosophila_melanogaster
ENSIPUG00000000355csde19960.779ENSETEG00000013678-9960.779Echinops_telfairi
ENSIPUG00000000355csde19281.301ENSETEG00000002491-7481.301Echinops_telfairi
ENSIPUG00000000355csde19068.927ENSETEG00000006280-9968.927Echinops_telfairi
ENSIPUG00000000355csde17952.796ENSETEG00000007109-9952.796Echinops_telfairi
ENSIPUG00000000355csde19953.656ENSEBUG00000008647csde19951.981Eptatretus_burgeri
ENSIPUG00000000355csde110077.302ENSEASG00005006284CSDE110074.314Equus_asinus_asinus
ENSIPUG00000000355csde110077.302ENSECAG00000020885CSDE19977.235Equus_caballus
ENSIPUG00000000355csde19380.374ENSEEUG00000006286CSDE16880.374Erinaceus_europaeus
ENSIPUG00000000355csde110084.974ENSELUG00000015507csde110084.974Esox_lucius
ENSIPUG00000000355csde110077.043ENSFCAG00000029266CSDE110077.043Felis_catus
ENSIPUG00000000355csde110074.938ENSFALG00000003407CSDE110074.938Ficedula_albicollis
ENSIPUG00000000355csde110073.441ENSFDAG00000007882CSDE110076.190Fukomys_damarensis
ENSIPUG00000000355csde19884.941ENSFHEG00000010799csde19984.941Fundulus_heteroclitus
ENSIPUG00000000355csde19981.852ENSGMOG00000012731csde110081.852Gadus_morhua
ENSIPUG00000000355csde19874.841ENSGALG00000002139CSDE19874.841Gallus_gallus
ENSIPUG00000000355csde19484.475ENSGAFG00000005241csde19584.475Gambusia_affinis
ENSIPUG00000000355csde19982.103ENSGACG00000004544csde110082.103Gasterosteus_aculeatus
ENSIPUG00000000355csde110077.302ENSGAGG00000017685CSDE110074.314Gopherus_agassizii
ENSIPUG00000000355csde110076.913ENSGGOG00000002164CSDE110076.913Gorilla_gorilla
ENSIPUG00000000355csde110083.917ENSHBUG00000020315csde110084.565Haplochromis_burtoni
ENSIPUG00000000355csde19767.708ENSHGLG00000008555-10067.708Heterocephalus_glaber_female
ENSIPUG00000000355csde19960.000ENSHGLG00000000650-9960.000Heterocephalus_glaber_female
ENSIPUG00000000355csde110069.520ENSHGLG00000003829-10069.520Heterocephalus_glaber_female
ENSIPUG00000000355csde19967.280ENSHGLG00000007471-9867.280Heterocephalus_glaber_female
ENSIPUG00000000355csde110070.039ENSHGLG00000009620-10070.428Heterocephalus_glaber_female
ENSIPUG00000000355csde110062.437ENSHGLG00000019549-10062.437Heterocephalus_glaber_female
ENSIPUG00000000355csde19765.854ENSHGLG00000010039-10065.854Heterocephalus_glaber_female
ENSIPUG00000000355csde19765.632ENSHGLG00100006910-10065.632Heterocephalus_glaber_male
ENSIPUG00000000355csde19963.138ENSHGLG00100002245-9963.138Heterocephalus_glaber_male
ENSIPUG00000000355csde110062.646ENSHGLG00100001846-10062.646Heterocephalus_glaber_male
ENSIPUG00000000355csde110076.524ENSHGLG00100019438-10076.524Heterocephalus_glaber_male
ENSIPUG00000000355csde19966.491ENSHGLG00100007287-9866.491Heterocephalus_glaber_male
ENSIPUG00000000355csde19761.641ENSHGLG00100004833-10061.641Heterocephalus_glaber_male
ENSIPUG00000000355csde19363.800ENSHGLG00100004195-10063.800Heterocephalus_glaber_male
ENSIPUG00000000355csde110064.981ENSHGLG00100012072-10064.981Heterocephalus_glaber_male
ENSIPUG00000000355csde110083.398ENSHCOG00000004158csde110083.398Hippocampus_comes
ENSIPUG00000000355csde110062.468ENSSTOG00000030994-10062.468Ictidomys_tridecemlineatus
ENSIPUG00000000355csde19358.929ENSSTOG00000032722-9858.929Ictidomys_tridecemlineatus
ENSIPUG00000000355csde110073.441ENSJJAG00000019571Csde110076.190Jaculus_jaculus
ENSIPUG00000000355csde110081.468ENSKMAG00000005685csde110081.064Kryptolebias_marmoratus
ENSIPUG00000000355csde110085.084ENSLBEG00000014770csde110085.084Labrus_bergylta
ENSIPUG00000000355csde110072.503ENSLACG00000018452CSDE19472.503Latimeria_chalumnae
ENSIPUG00000000355csde110081.101ENSLOCG00000010413csde19481.101Lepisosteus_oculatus
ENSIPUG00000000355csde110076.265ENSLAFG00000007150CSDE19676.265Loxodonta_africana
ENSIPUG00000000355csde110076.913ENSMFAG00000003674CSDE110076.913Macaca_fascicularis
ENSIPUG00000000355csde110076.913ENSMMUG00000001974CSDE110076.913Macaca_mulatta
ENSIPUG00000000355csde110076.913ENSMNEG00000045247CSDE19776.913Macaca_nemestrina
ENSIPUG00000000355csde110076.654ENSMLEG00000038673CSDE19476.654Mandrillus_leucophaeus
ENSIPUG00000000355csde110085.603ENSMAMG00000008821csde110085.603Mastacembelus_armatus
ENSIPUG00000000355csde110083.917ENSMZEG00005021675csde110084.565Maylandia_zebra
ENSIPUG00000000355csde110077.850ENSMGAG00000016381CSDE110077.850Meleagris_gallopavo
ENSIPUG00000000355csde110073.192ENSMAUG00000014031Csde110075.893Mesocricetus_auratus
ENSIPUG00000000355csde110076.394ENSMICG00000002050CSDE19676.333Microcebus_murinus
ENSIPUG00000000355csde110076.135ENSMOCG00000018960Csde110076.135Microtus_ochrogaster
ENSIPUG00000000355csde110086.122ENSMMOG00000015075csde110086.122Mola_mola
ENSIPUG00000000355csde110077.361ENSMODG00000004685CSDE110075.062Monodelphis_domestica
ENSIPUG00000000355csde110085.214ENSMALG00000007132csde110085.214Monopterus_albus
ENSIPUG00000000355csde110076.265MGP_CAROLIEiJ_G0025444Csde110084.106Mus_caroli
ENSIPUG00000000355csde110076.265ENSMUSG00000068823Csde110084.106Mus_musculus
ENSIPUG00000000355csde110076.265MGP_PahariEiJ_G0026888Csde110084.106Mus_pahari
ENSIPUG00000000355csde110076.265MGP_SPRETEiJ_G0026394Csde110084.106Mus_spretus
ENSIPUG00000000355csde19874.173ENSMPUG00000005753CSDE19974.173Mustela_putorius_furo
ENSIPUG00000000355csde110076.783ENSMLUG00000005681CSDE19476.783Myotis_lucifugus
ENSIPUG00000000355csde110073.067ENSNGAG00000021929Csde110075.744Nannospalax_galili
ENSIPUG00000000355csde19752.993ENSNGAG00000012599-10052.993Nannospalax_galili
ENSIPUG00000000355csde110083.917ENSNBRG00000020808csde110084.565Neolamprologus_brichardi
ENSIPUG00000000355csde110076.783ENSNLEG00000004842CSDE19776.783Nomascus_leucogenys
ENSIPUG00000000355csde19874.834ENSMEUG00000002677CSDE19974.834Notamacropus_eugenii
ENSIPUG00000000355csde19869.822ENSOPRG00000005002CSDE18269.822Ochotona_princeps
ENSIPUG00000000355csde110073.691ENSODEG00000007383-10076.488Octodon_degus
ENSIPUG00000000355csde19752.423ENSODEG00000005979-9852.423Octodon_degus
ENSIPUG00000000355csde110078.999ENSONIG00000009309csde110079.609Oreochromis_niloticus
ENSIPUG00000000355csde110079.661ENSOANG00000003346-8279.661Ornithorhynchus_anatinus
ENSIPUG00000000355csde110076.913ENSOCUG00000016438CSDE19476.913Oryctolagus_cuniculus
ENSIPUG00000000355csde110084.047ENSORLG00000000707csde110084.047Oryzias_latipes
ENSIPUG00000000355csde110080.625ENSORLG00020005148csde110078.755Oryzias_latipes_hni
ENSIPUG00000000355csde110084.047ENSORLG00015019415csde110084.047Oryzias_latipes_hsok
ENSIPUG00000000355csde110084.436ENSOMEG00000015656csde110084.436Oryzias_melastigma
ENSIPUG00000000355csde110076.913ENSOGAG00000012127CSDE19476.913Otolemur_garnettii
ENSIPUG00000000355csde110076.654ENSOARG00000020034CSDE19476.654Ovis_aries
ENSIPUG00000000355csde110076.913ENSPPAG00000025861CSDE110076.913Pan_paniscus
ENSIPUG00000000355csde110077.043ENSPPRG00000006747CSDE19477.043Panthera_pardus
ENSIPUG00000000355csde110077.043ENSPTIG00000015468CSDE110074.065Panthera_tigris_altaica
ENSIPUG00000000355csde110076.913ENSPTRG00000033721CSDE110073.940Pan_troglodytes
ENSIPUG00000000355csde110076.913ENSPANG00000018873CSDE110076.913Papio_anubis
ENSIPUG00000000355csde110084.805ENSPKIG00000009459csde110084.805Paramormyrops_kingsleyae
ENSIPUG00000000355csde19675.439ENSPSIG00000003823CSDE19675.439Pelodiscus_sinensis
ENSIPUG00000000355csde110083.808ENSPMGG00000000772csde110083.808Periophthalmus_magnuspinnatus
ENSIPUG00000000355csde110073.441ENSPEMG00000020357-10076.190Peromyscus_maniculatus_bairdii
ENSIPUG00000000355csde110075.062ENSPCIG00000022587CSDE110075.062Phascolarctos_cinereus
ENSIPUG00000000355csde19784.465ENSPFOG00000012664csde110084.031Poecilia_formosa
ENSIPUG00000000355csde19579.939ENSPLAG00000017680csde19379.939Poecilia_latipinna
ENSIPUG00000000355csde19580.245ENSPMEG00000005094csde19580.245Poecilia_mexicana
ENSIPUG00000000355csde110081.095ENSPREG00000011631csde110078.606Poecilia_reticulata
ENSIPUG00000000355csde110074.065ENSPPYG00000000996CSDE110074.065Pongo_abelii
ENSIPUG00000000355csde110073.930ENSPCAG00000014368CSDE19473.930Procavia_capensis
ENSIPUG00000000355csde18869.630ENSPCOG00000008223-9269.630Propithecus_coquereli
ENSIPUG00000000355csde110077.043ENSPCOG00000017893CSDE110077.043Propithecus_coquereli
ENSIPUG00000000355csde110071.984ENSPVAG00000008225CSDE19571.984Pteropus_vampyrus
ENSIPUG00000000355csde110083.917ENSPNYG00000013745csde110084.565Pundamilia_nyererei
ENSIPUG00000000355csde110090.222ENSPNAG00000001958csde110090.222Pygocentrus_nattereri
ENSIPUG00000000355csde110073.192ENSRNOG00000061058Csde110073.192Rattus_norvegicus
ENSIPUG00000000355csde110073.834ENSRBIG00000038088-10073.834Rhinopithecus_bieti
ENSIPUG00000000355csde110072.374ENSRBIG00000038966-9472.374Rhinopithecus_bieti
ENSIPUG00000000355csde110076.913ENSRROG00000043101CSDE19776.913Rhinopithecus_roxellana
ENSIPUG00000000355csde110076.783ENSSBOG00000035592CSDE19576.783Saimiri_boliviensis_boliviensis
ENSIPUG00000000355csde110077.951ENSSHAG00000009831CSDE110077.951Sarcophilus_harrisii
ENSIPUG00000000355csde110083.377ENSSFOG00015007498csde110083.377Scleropages_formosus
ENSIPUG00000000355csde110085.214ENSSMAG00000007203csde110085.214Scophthalmus_maximus
ENSIPUG00000000355csde110085.733ENSSDUG00000015380csde110085.733Seriola_dumerili
ENSIPUG00000000355csde110085.733ENSSLDG00000008819csde110085.733Seriola_lalandi_dorsalis
ENSIPUG00000000355csde110076.524ENSSARG00000000738CSDE19476.524Sorex_araneus
ENSIPUG00000000355csde110078.080ENSSPUG00000008714CSDE110078.080Sphenodon_punctatus
ENSIPUG00000000355csde110086.252ENSSPAG00000000716csde110086.252Stegastes_partitus
ENSIPUG00000000355csde110077.302ENSSSCG00000006752CSDE110077.302Sus_scrofa
ENSIPUG00000000355csde110074.129ENSTGUG00000000972CSDE110074.129Taeniopygia_guttata
ENSIPUG00000000355csde110081.429ENSTRUG00000007996csde110081.429Takifugu_rubripes
ENSIPUG00000000355csde19377.011ENSTNIG00000010878csde110077.011Tetraodon_nigroviridis
ENSIPUG00000000355csde17677.914ENSTBEG00000011880-6177.914Tupaia_belangeri
ENSIPUG00000000355csde110076.654ENSTTRG00000015583CSDE19476.654Tursiops_truncatus
ENSIPUG00000000355csde18772.960ENSUAMG00000024289-9972.960Ursus_americanus
ENSIPUG00000000355csde18681.410ENSUAMG00000021779-9981.410Ursus_americanus
ENSIPUG00000000355csde110070.817ENSUMAG00000009720-9770.817Ursus_maritimus
ENSIPUG00000000355csde18672.577ENSUMAG00000011714-9972.577Ursus_maritimus
ENSIPUG00000000355csde110081.250ENSVPAG00000000749CSDE17981.250Vicugna_pacos
ENSIPUG00000000355csde19372.529ENSVVUG00000009890CSDE19472.529Vulpes_vulpes
ENSIPUG00000000355csde110074.410ENSXETG00000021448csde110074.410Xenopus_tropicalis
ENSIPUG00000000355csde19487.636ENSXCOG00000000035csde18987.636Xiphophorus_couchianus
ENSIPUG00000000355csde19885.185ENSXMAG00000009080csde19885.185Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us