EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSIPUG00000000361 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171482
Alias: -
Full Name: zgc:171482
Gene Type: protein_coding
Species: Ictalurus_punctatus
Status: putative
Strand: Minus strand
Length: 31343 bases
Position: chr3:18113843-18145185
Accession: ZDB-GENE-080204-84
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSIPUP00000000465	zf-met	PF12874.7	5.1e-15	1	2
ENSIPUP00000000465	zf-met	PF12874.7	5.1e-15	2	2
ENSIPUP00000000465	zf-C2H2_jaz	PF12171.8	1.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSIPUT00000000507	-	490	-	ENSIPUP00000000465	138 (aa)	-	-

Gene Model

Click here to download ENSIPUG00000000361's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSIPUG00000000361's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSIPUG00000000361	zgc:171482	83	48.780	ENSIPUG00000006892	znf346	55	48.780
ENSIPUG00000000361	zgc:171482	89	73.276	ENSIPUG00000022248	zmat4	73	73.276

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSIPUG00000000361	zgc:171482	85	94.872	ENSAPOG00000019970	zgc:171482	79	94.872	Acanthochromis_polyacanthus
ENSIPUG00000000361	zgc:171482	85	94.872	ENSACIG00000021512	zgc:171482	87	94.872	Amphilophus_citrinellus
ENSIPUG00000000361	zgc:171482	85	94.872	ENSAOCG00000000751	zgc:171482	86	94.872	Amphiprion_ocellaris
ENSIPUG00000000361	zgc:171482	86	94.068	ENSAPEG00000014154	zgc:171482	85	94.068	Amphiprion_percula
ENSIPUG00000000361	zgc:171482	83	93.913	ENSATEG00000001371	zgc:171482	79	93.277	Anabas_testudineus
ENSIPUG00000000361	zgc:171482	85	94.872	ENSACLG00000010511	zgc:171482	81	94.872	Astatotilapia_calliptera
ENSIPUG00000000361	zgc:171482	90	95.161	ENSAMXG00000002299	zgc:171482	94	95.161	Astyanax_mexicanus
ENSIPUG00000000361	zgc:171482	91	85.600	ENSCSEG00000006509	zgc:171482	82	85.600	Cynoglossus_semilaevis
ENSIPUG00000000361	zgc:171482	85	94.017	ENSCVAG00000013606	zgc:171482	80	94.017	Cyprinodon_variegatus
ENSIPUG00000000361	zgc:171482	87	95.833	ENSDARG00000074415	zgc:171482	90	95.833	Danio_rerio
ENSIPUG00000000361	zgc:171482	93	86.719	ENSELUG00000021817	zgc:171482	92	86.719	Esox_lucius
ENSIPUG00000000361	zgc:171482	89	70.968	ENSELUG00000017517	-	60	86.517	Esox_lucius
ENSIPUG00000000361	zgc:171482	85	93.162	ENSFHEG00000002233	zgc:171482	92	86.822	Fundulus_heteroclitus
ENSIPUG00000000361	zgc:171482	86	92.437	ENSGMOG00000010508	zgc:171482	79	92.437	Gadus_morhua
ENSIPUG00000000361	zgc:171482	88	90.984	ENSGAFG00000009398	zgc:171482	82	89.600	Gambusia_affinis
ENSIPUG00000000361	zgc:171482	86	93.277	ENSGACG00000007680	zgc:171482	80	93.277	Gasterosteus_aculeatus
ENSIPUG00000000361	zgc:171482	86	94.068	ENSHBUG00000023289	zgc:171482	89	94.068	Haplochromis_burtoni
ENSIPUG00000000361	zgc:171482	84	91.453	ENSHCOG00000018086	zgc:171482	87	91.453	Hippocampus_comes
ENSIPUG00000000361	zgc:171482	85	94.017	ENSKMAG00000005077	zgc:171482	68	94.017	Kryptolebias_marmoratus
ENSIPUG00000000361	zgc:171482	93	87.597	ENSLBEG00000023823	zgc:171482	92	87.597	Labrus_bergylta
ENSIPUG00000000361	zgc:171482	88	90.164	ENSLOCG00000008863	zgc:171482	77	90.164	Lepisosteus_oculatus
ENSIPUG00000000361	zgc:171482	86	92.373	ENSMAMG00000001031	zgc:171482	74	92.373	Mastacembelus_armatus
ENSIPUG00000000361	zgc:171482	85	89.744	ENSMZEG00005027721	zgc:171482	79	89.744	Maylandia_zebra
ENSIPUG00000000361	zgc:171482	85	95.726	ENSMMOG00000010523	zgc:171482	89	95.726	Mola_mola
ENSIPUG00000000361	zgc:171482	85	94.872	ENSMALG00000017883	zgc:171482	80	94.872	Monopterus_albus
ENSIPUG00000000361	zgc:171482	84	93.966	ENSNBRG00000021035	zgc:171482	87	93.966	Neolamprologus_brichardi
ENSIPUG00000000361	zgc:171482	85	94.872	ENSONIG00000018365	zgc:171482	78	94.872	Oreochromis_niloticus
ENSIPUG00000000361	zgc:171482	85	94.017	ENSORLG00000007607	zgc:171482	92	84.733	Oryzias_latipes
ENSIPUG00000000361	zgc:171482	93	85.156	ENSORLG00020003563	zgc:171482	92	83.969	Oryzias_latipes_hni
ENSIPUG00000000361	zgc:171482	85	94.017	ENSORLG00015008552	zgc:171482	92	84.733	Oryzias_latipes_hsok
ENSIPUG00000000361	zgc:171482	91	87.023	ENSOMEG00000003526	zgc:171482	92	87.023	Oryzias_melastigma
ENSIPUG00000000361	zgc:171482	87	92.500	ENSPKIG00000015911	-	83	92.500	Paramormyrops_kingsleyae
ENSIPUG00000000361	zgc:171482	80	90.000	ENSPKIG00000016244	zgc:171482	87	85.246	Paramormyrops_kingsleyae
ENSIPUG00000000361	zgc:171482	86	92.500	ENSPMGG00000020230	zgc:171482	82	92.500	Periophthalmus_magnuspinnatus
ENSIPUG00000000361	zgc:171482	85	94.017	ENSPFOG00000001974	zgc:171482	79	94.017	Poecilia_formosa
ENSIPUG00000000361	zgc:171482	84	94.828	ENSPLAG00000003327	zgc:171482	79	94.828	Poecilia_latipinna
ENSIPUG00000000361	zgc:171482	85	94.017	ENSPMEG00000004988	zgc:171482	79	86.325	Poecilia_mexicana
ENSIPUG00000000361	zgc:171482	84	94.828	ENSPREG00000019241	zgc:171482	84	94.828	Poecilia_reticulata
ENSIPUG00000000361	zgc:171482	85	94.872	ENSPNYG00000007773	zgc:171482	81	94.872	Pundamilia_nyererei
ENSIPUG00000000361	zgc:171482	86	96.639	ENSPNAG00000007619	zgc:171482	79	96.639	Pygocentrus_nattereri
ENSIPUG00000000361	zgc:171482	87	86.667	ENSSFOG00015016149	zgc:171482	96	86.667	Scleropages_formosus
ENSIPUG00000000361	zgc:171482	88	90.909	ENSSFOG00015021238	zgc:171482	80	91.597	Scleropages_formosus
ENSIPUG00000000361	zgc:171482	88	90.909	ENSSMAG00000002715	zgc:171482	78	90.909	Scophthalmus_maximus
ENSIPUG00000000361	zgc:171482	85	94.872	ENSSDUG00000008773	zgc:171482	82	94.872	Seriola_dumerili
ENSIPUG00000000361	zgc:171482	85	94.872	ENSSLDG00000019510	zgc:171482	82	94.872	Seriola_lalandi_dorsalis
ENSIPUG00000000361	zgc:171482	88	90.476	ENSSPAG00000013724	zgc:171482	100	90.476	Stegastes_partitus
ENSIPUG00000000361	zgc:171482	83	93.913	ENSTRUG00000005705	zgc:171482	68	93.913	Takifugu_rubripes
ENSIPUG00000000361	zgc:171482	83	71.304	ENSTNIG00000008679	zgc:171482	80	71.304	Tetraodon_nigroviridis
ENSIPUG00000000361	zgc:171482	83	69.841	ENSXETG00000013525	zmat4	77	77.358	Xenopus_tropicalis
ENSIPUG00000000361	zgc:171482	88	81.967	ENSXMAG00000002641	zgc:171482	81	80.952	Xiphophorus_maculatus